RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 PNISRQ8TF01 805 aaKnown RBP14.16□□□□□ -0.14
IFT43-212ENST00000556742 SYT17Q9BSW7 474 aa14.16□□□□□ -0.14
IFT43-212ENST00000556742 SCN7AQ01118 1682 aa14.16□□□□□ -0.14
IFT43-212ENST00000556742 BCORQ6W2J9 1755 aa14.16□□□□□ -0.14
IFT43-212ENST00000556742 CHD4Q14839 1912 aa14.15□□□□□ -0.14
IFT43-212ENST00000556742 RFC4P35249 363 aa14.15□□□□□ -0.14
IFT43-212ENST00000556742 RIPK4P57078 832 aa14.15□□□□□ -0.14
IFT43-212ENST00000556742 MSL1Q68DK7 614 aa14.15□□□□□ -0.14
IFT43-212ENST00000556742 NLGN1Q8N2Q7 840 aa14.15□□□□□ -0.14
IFT43-212ENST00000556742 SOS1Q07889 1333 aaPredicted RBP14.15□□□□□ -0.15
IFT43-212ENST00000556742 AFDNP55196 1824 aaKnown RBP14.14□□□□□ -0.15
IFT43-212ENST00000556742 USP42Q9H9J4 1324 aaKnown RBP14.14□□□□□ -0.15
IFT43-212ENST00000556742 COL15A1P39059 1388 aa14.13□□□□□ -0.15
IFT43-212ENST00000556742 KCNQ3O43525 872 aa14.13□□□□□ -0.15
IFT43-212ENST00000556742 GYS1P13807 737 aa14.13□□□□□ -0.15
IFT43-212ENST00000556742 ZBTB1Q9Y2K1 713 aa14.13□□□□□ -0.15
IFT43-212ENST00000556742 KIAA1551Q9HCM1 1747 aa14.12□□□□□ -0.15
IFT43-212ENST00000556742 SNRPA1P09661 255 aaKnown RBP14.12□□□□□ -0.15
IFT43-212ENST00000556742 CCDC146Q8IYE0 955 aa14.12□□□□□ -0.15
IFT43-212ENST00000556742 BABAM1Q9NWV8 329 aa14.12□□□□□ -0.15
IFT43-212ENST00000556742 NRXN2Q9P2S2 1712 aa14.12□□□□□ -0.15
IFT43-212ENST00000556742 BRCA1P38398 1863 aaKnown RBP14.12□□□□□ -0.15
IFT43-212ENST00000556742 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
IFT43-212ENST00000556742 IL6STP40189 918 aaPredicted RBP14.11□□□□□ -0.15
IFT43-212ENST00000556742 EIF5P55010 431 aaKnown RBP14.11□□□□□ -0.15
IFT43-212ENST00000556742 CD2APQ9Y5K6 639 aa14.11□□□□□ -0.15
IFT43-212ENST00000556742 ZPR1O75312 459 aa14.1□□□□□ -0.15
IFT43-212ENST00000556742 MMP10P09238 476 aa14.1□□□□□ -0.15
IFT43-212ENST00000556742 THUMPD2Q9BTF0 503 aaKnown RBP14.1□□□□□ -0.15
IFT43-212ENST00000556742 NARFQ9UHQ1 456 aa14.1□□□□□ -0.15
IFT43-212ENST00000556742 N4BP2Q86UW6 1770 aaPredicted RBP14.09□□□□□ -0.15
IFT43-212ENST00000556742 NUP98P52948 1817 aa14.09□□□□□ -0.15
IFT43-212ENST00000556742 A0A087WZG4 1122 aa14.09□□□□□ -0.15
IFT43-212ENST00000556742 CANXP27824 592 aaKnown RBP14.09□□□□□ -0.15
IFT43-212ENST00000556742 CCDC184Q52MB2 194 aa14.09□□□□□ -0.15
IFT43-212ENST00000556742 MIS18AQ9NYP9 233 aa14.09□□□□□ -0.15
IFT43-212ENST00000556742 TRIM35Q9UPQ4 493 aa14.09□□□□□ -0.15
IFT43-212ENST00000556742 USP16Q9Y5T5 823 aa14.09□□□□□ -0.15
IFT43-212ENST00000556742 EIF4A1P60842 406 aaKnown RBP14.08□□□□□ -0.16
IFT43-212ENST00000556742 NEUROD2Q15784 382 aa14.08□□□□□ -0.16
IFT43-212ENST00000556742 SRP68Q9UHB9 627 aaKnown RBP14.08□□□□□ -0.16
IFT43-212ENST00000556742 RRP7AQ9Y3A4 280 aaKnown RBP14.08□□□□□ -0.16
IFT43-212ENST00000556742 C10orf71Q711Q0 1435 aa14.07□□□□□ -0.16
IFT43-212ENST00000556742 GIGYF1O75420 1035 aaPredicted RBP14.07□□□□□ -0.16
IFT43-212ENST00000556742 FKBP8Q14318 412 aa14.07□□□□□ -0.16
IFT43-212ENST00000556742 USPL1Q5W0Q7 1092 aa14.07□□□□□ -0.16
IFT43-212ENST00000556742 KLHL34Q8N239 644 aa14.07□□□□□ -0.16
IFT43-212ENST00000556742 MRS2Q9HD23 443 aa14.07□□□□□ -0.16
IFT43-212ENST00000556742 TSPYL4Q9UJ04 414 aa14.07□□□□□ -0.16
IFT43-212ENST00000556742 DLEC1Q9Y238 1755 aa14.06□□□□□ -0.16
IFT43-212ENST00000556742 PRAMEF22A3QJZ6 481 aa14.06□□□□□ -0.16
IFT43-212ENST00000556742 A1BGP04217 495 aa14.06□□□□□ -0.16
IFT43-212ENST00000556742 NPM2Q86SE8 214 aaKnown RBP14.06□□□□□ -0.16
IFT43-212ENST00000556742 NLGN2Q8NFZ4 835 aa14.06□□□□□ -0.16
IFT43-212ENST00000556742 PARP3Q9Y6F1 533 aa14.06□□□□□ -0.16
IFT43-212ENST00000556742 ARFGEF1Q9Y6D6 1849 aa14.06□□□□□ -0.16
IFT43-212ENST00000556742 CHL1O00533 1208 aa14.05□□□□□ -0.16
IFT43-212ENST00000556742 APAF1O14727 1248 aa14.05□□□□□ -0.16
IFT43-212ENST00000556742 TM4SF1P30408 202 aa14.05□□□□□ -0.16
IFT43-212ENST00000556742 RGL2O15211 777 aa14.04□□□□□ -0.16
IFT43-212ENST00000556742 CALD1Q05682 793 aaKnown RBP14.04□□□□□ -0.16
IFT43-212ENST00000556742 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
IFT43-212ENST00000556742 BCL2L12Q9HB09 334 aa14.04□□□□□ -0.16
IFT43-212ENST00000556742 ERBB4Q15303 1308 aa14.04□□□□□ -0.16
IFT43-212ENST00000556742 ANKRD31Q8N7Z5 1873 aa14.04□□□□□ -0.16
IFT43-212ENST00000556742 POLRMTO00411 1230 aaKnown RBP14.03□□□□□ -0.16
IFT43-212ENST00000556742 DDR1Q08345 913 aa14.03□□□□□ -0.16
IFT43-212ENST00000556742 CFAP44Q96MT7 982 aa14.03□□□□□ -0.16
IFT43-212ENST00000556742 PXDNLA1KZ92 1463 aa14.03□□□□□ -0.16
IFT43-212ENST00000556742 ANKRD36CQ5JPF3 1778 aa14.03□□□□□ -0.16
IFT43-212ENST00000556742 NBPF26B4DH59 902 aa14.02□□□□□ -0.17
IFT43-212ENST00000556742 TGFB2P61812 414 aa14.02□□□□□ -0.17
IFT43-212ENST00000556742 NFIXQ14938 502 aa14.02□□□□□ -0.17
IFT43-212ENST00000556742 CCDC27Q2M243 656 aa14.02□□□□□ -0.17
IFT43-212ENST00000556742 NBPF10Q6P3W6 841 aaKnown RBP14.02□□□□□ -0.17
IFT43-212ENST00000556742 DZIP3Q86Y13 1208 aaKnown RBP14.02□□□□□ -0.17
IFT43-212ENST00000556742 NBPF15Q8N660 670 aa14.02□□□□□ -0.17
IFT43-212ENST00000556742 TBC1D2BQ9UPU7 963 aa14.02□□□□□ -0.17
IFT43-212ENST00000556742 ZNF330Q9Y3S2 320 aaPredicted RBP14.02□□□□□ -0.17
IFT43-212ENST00000556742 CAMTA2O94983 1202 aa14.01□□□□□ -0.17
IFT43-212ENST00000556742 ZNF853P0CG23 659 aa14.01□□□□□ -0.17
IFT43-212ENST00000556742 CLEC4GQ6UXB4 293 aa14.01□□□□□ -0.17
IFT43-212ENST00000556742 CACNA1FO60840 1977 aa14.01□□□□□ -0.17
IFT43-212ENST00000556742 CARMIL3Q8ND23 1372 aa14□□□□□ -0.17
IFT43-212ENST00000556742 HOXB7P09629 217 aa14□□□□□ -0.17
IFT43-212ENST00000556742 PIP4K2AP48426 406 aaPredicted RBP14□□□□□ -0.17
IFT43-212ENST00000556742 GPR162Q16538 588 aa14□□□□□ -0.17
IFT43-212ENST00000556742 IFT57Q9NWB7 429 aa14□□□□□ -0.17
IFT43-212ENST00000556742 ZNF652Q9Y2D9 606 aa14□□□□□ -0.17
IFT43-212ENST00000556742 GNAI1P63096 354 aa13.99□□□□□ -0.17
IFT43-212ENST00000556742 LAS1LQ9Y4W2 734 aaKnown RBP13.99□□□□□ -0.17
IFT43-212ENST00000556742 ARFGEF2Q9Y6D5 1785 aa13.99□□□□□ -0.17
IFT43-212ENST00000556742 CACNA1SQ13698 1873 aa13.98□□□□□ -0.17
IFT43-212ENST00000556742 GRIN3BO60391 1043 aa13.98□□□□□ -0.17
IFT43-212ENST00000556742 SERPINB2P05120 415 aa13.98□□□□□ -0.17
IFT43-212ENST00000556742 TBC1D9BQ66K14 1250 aa13.98□□□□□ -0.17
IFT43-212ENST00000556742 COL11A2P13942 1736 aaPredicted RBP13.98□□□□□ -0.17
IFT43-212ENST00000556742 ERVV-1B6SEH8 477 aa13.97□□□□□ -0.17
IFT43-212ENST00000556742 SETDB2Q96T68 719 aa13.97□□□□□ -0.17
IFT43-212ENST00000556742 MBIPQ9NS73 344 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms