RNA–Protein interactions for RNA: ENST00000555604.1

PRKCH-217, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-217ENST00000555604 ZNF428Q96B54 188 aa8.54□□□□□ -1.04
PRKCH-217ENST00000555604 NUP188Q5SRE5 1749 aa8.54□□□□□ -1.04
PRKCH-217ENST00000555604 KAT6BQ8WYB5 2073 aa8.53□□□□□ -1.04
PRKCH-217ENST00000555604 CT47B1P0C2W7 299 aaPredicted RBP8.53□□□□□ -1.04
PRKCH-217ENST00000555604 KCNQ4P56696 695 aa8.53□□□□□ -1.04
PRKCH-217ENST00000555604 R3HDM1Q15032 1099 aaKnown RBP8.53□□□□□ -1.04
PRKCH-217ENST00000555604 ZNF827Q17R98 1081 aa8.53□□□□□ -1.04
PRKCH-217ENST00000555604 ANO8Q9HCE9 1232 aaPredicted RBP8.53□□□□□ -1.04
PRKCH-217ENST00000555604 C4BP0C0L5 1744 aa8.52□□□□□ -1.05
PRKCH-217ENST00000555604 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.52□□□□□ -1.05
PRKCH-217ENST00000555604 RFC4P35249 363 aa8.52□□□□□ -1.05
PRKCH-217ENST00000555604 EIF5P55010 431 aaKnown RBP8.52□□□□□ -1.05
PRKCH-217ENST00000555604 HNRNPUQ00839 825 aaKnown RBP eCLIP8.52□□□□□ -1.05
PRKCH-217ENST00000555604 CCDC30Q5VVM6 783 aa8.52□□□□□ -1.05
PRKCH-217ENST00000555604 DUSP27Q5VZP5 1158 aa8.52□□□□□ -1.05
PRKCH-217ENST00000555604 NLGN1Q8N2Q7 840 aa8.52□□□□□ -1.05
PRKCH-217ENST00000555604 MTFR1LQ9H019 292 aa8.52□□□□□ -1.05
PRKCH-217ENST00000555604 DBF4Q9UBU7 674 aaPredicted RBP8.52□□□□□ -1.05
PRKCH-217ENST00000555604 SALL2Q9Y467 1007 aaPredicted RBP8.52□□□□□ -1.05
PRKCH-217ENST00000555604 USP16Q9Y5T5 823 aa8.52□□□□□ -1.05
PRKCH-217ENST00000555604 KDM3BQ7LBC6 1761 aa8.52□□□□□ -1.05
PRKCH-217ENST00000555604 VIRMAQ69YN4 1812 aaKnown RBP8.52□□□□□ -1.05
PRKCH-217ENST00000555604 ZBED9Q6R2W3 1325 aa8.52□□□□□ -1.05
PRKCH-217ENST00000555604 PNPLA7Q6ZV29 1317 aa8.52□□□□□ -1.05
PRKCH-217ENST00000555604 FANCIQ9NVI1 1328 aa8.52□□□□□ -1.05
PRKCH-217ENST00000555604 ZPR1O75312 459 aa8.51□□□□□ -1.05
PRKCH-217ENST00000555604 SLFN5Q08AF3 891 aa8.51□□□□□ -1.05
PRKCH-217ENST00000555604 HDGFL1Q5TGJ6 251 aa8.51□□□□□ -1.05
PRKCH-217ENST00000555604 TRMT2AQ8IZ69 625 aaKnown RBP8.51□□□□□ -1.05
PRKCH-217ENST00000555604 ARHGEF1Q92888 912 aaKnown RBP8.51□□□□□ -1.05
PRKCH-217ENST00000555604 DDX21Q9NR30 783 aaKnown RBP eCLIP8.51□□□□□ -1.05
PRKCH-217ENST00000555604 ERVV-1B6SEH8 477 aa8.5□□□□□ -1.05
PRKCH-217ENST00000555604 COL5A3P25940 1745 aaPredicted RBP8.5□□□□□ -1.05
PRKCH-217ENST00000555604 CANXP27824 592 aaKnown RBP8.5□□□□□ -1.05
PRKCH-217ENST00000555604 QSER1Q2KHR3 1735 aa8.5□□□□□ -1.05
PRKCH-217ENST00000555604 TWISTNBQ3B726 338 aaPredicted RBP8.5□□□□□ -1.05
PRKCH-217ENST00000555604 CLEC4GQ6UXB4 293 aa8.5□□□□□ -1.05
PRKCH-217ENST00000555604 COL23A1Q86Y22 540 aaPredicted RBP8.5□□□□□ -1.05
PRKCH-217ENST00000555604 SPON1Q9HCB6 807 aa8.5□□□□□ -1.05
PRKCH-217ENST00000555604 HYPKQ9NX55 129 aa8.5□□□□□ -1.05
PRKCH-217ENST00000555604 NARFQ9UHQ1 456 aa8.5□□□□□ -1.05
PRKCH-217ENST00000555604 ZNF652Q9Y2D9 606 aa8.5□□□□□ -1.05
PRKCH-217ENST00000555604 ZBTB1Q9Y2K1 713 aa8.5□□□□□ -1.05
PRKCH-217ENST00000555604 TAF1LQ8IZX4 1826 aa8.5□□□□□ -1.05
PRKCH-217ENST00000555604 COL15A1P39059 1388 aa8.49□□□□□ -1.05
PRKCH-217ENST00000555604 TJP1Q07157 1748 aa8.49□□□□□ -1.05
PRKCH-217ENST00000555604 MSH5O43196 834 aa8.49□□□□□ -1.05
PRKCH-217ENST00000555604 A1BGP04217 495 aa8.49□□□□□ -1.05
PRKCH-217ENST00000555604 EIF2S2P20042 333 aaKnown RBP8.49□□□□□ -1.05
PRKCH-217ENST00000555604 POLD1P28340 1107 aa8.49□□□□□ -1.05
PRKCH-217ENST00000555604 C8orf58Q8NAV2 365 aa8.49□□□□□ -1.05
PRKCH-217ENST00000555604 TSR2Q969E8 191 aaKnown RBP8.49□□□□□ -1.05
PRKCH-217ENST00000555604 STK31Q9BXU1 1019 aa8.49□□□□□ -1.05
PRKCH-217ENST00000555604 USP42Q9H9J4 1324 aaKnown RBP8.49□□□□□ -1.05
PRKCH-217ENST00000555604 PRAMEF22A3QJZ6 481 aa8.48□□□□□ -1.05
PRKCH-217ENST00000555604 PSDA5PKW4 1024 aaPredicted RBP8.48□□□□□ -1.05
PRKCH-217ENST00000555604 NBPF26B4DH59 902 aa8.48□□□□□ -1.05
PRKCH-217ENST00000555604 VAMP4O75379 141 aa8.48□□□□□ -1.05
PRKCH-217ENST00000555604 PHF14O94880 888 aa8.48□□□□□ -1.05
PRKCH-217ENST00000555604 DDX58O95786 925 aaKnown RBP8.48□□□□□ -1.05
PRKCH-217ENST00000555604 NBPF10Q6P3W6 841 aaKnown RBP8.48□□□□□ -1.05
PRKCH-217ENST00000555604 KIF6Q6ZMV9 814 aa8.48□□□□□ -1.05
PRKCH-217ENST00000555604 DZIP3Q86Y13 1208 aaKnown RBP8.48□□□□□ -1.05
PRKCH-217ENST00000555604 NBPF15Q8N660 670 aa8.48□□□□□ -1.05
PRKCH-217ENST00000555604 GYS1P13807 737 aa8.47□□□□□ -1.05
PRKCH-217ENST00000555604 EXOSC9Q06265 439 aaKnown RBP8.47□□□□□ -1.05
PRKCH-217ENST00000555604 PDIA6Q15084 440 aa8.47□□□□□ -1.05
PRKCH-217ENST00000555604 ALDH1L2Q3SY69 923 aa8.47□□□□□ -1.05
PRKCH-217ENST00000555604 HSP90AB3PQ58FF7 597 aa8.47□□□□□ -1.05
PRKCH-217ENST00000555604 SPINK5Q9NQ38 1064 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-217ENST00000555604 LAMB4A4D0S4 1761 aa8.46□□□□□ -1.05
PRKCH-217ENST00000555604 ELL2O00472 640 aaPredicted RBP8.46□□□□□ -1.06
PRKCH-217ENST00000555604 MYL6BP14649 208 aa8.46□□□□□ -1.06
PRKCH-217ENST00000555604 KRT24Q2M2I5 525 aa8.46□□□□□ -1.06
PRKCH-217ENST00000555604 USPL1Q5W0Q7 1092 aa8.46□□□□□ -1.06
PRKCH-217ENST00000555604 LRP10Q7Z4F1 713 aa8.46□□□□□ -1.06
PRKCH-217ENST00000555604 AMIGO3Q86WK7 504 aa8.46□□□□□ -1.06
PRKCH-217ENST00000555604 TSPYL6Q8N831 410 aa8.46□□□□□ -1.06
PRKCH-217ENST00000555604 CHPF2Q9P2E5 772 aa8.46□□□□□ -1.06
PRKCH-217ENST00000555604 UBR3Q6ZT12 1888 aa8.46□□□□□ -1.06
PRKCH-217ENST00000555604 MAP3K15Q6ZN16 1313 aa8.46□□□□□ -1.06
PRKCH-217ENST00000555604 CASZ1Q86V15 1759 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 SENP3-EIF4A1A0A087X0R7 540 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 CAMTA2O94983 1202 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 ZBTB7AO95365 584 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 TM4SF1P30408 202 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 BRPF1P55201 1214 aaPredicted RBP8.45□□□□□ -1.06
PRKCH-217ENST00000555604 GIGYF2Q6Y7W6 1299 aaKnown RBP8.45□□□□□ -1.06
PRKCH-217ENST00000555604 ANKRD13DQ6ZTN6 518 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 COPS6Q7L5N1 327 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 PLBD2Q8NHP8 589 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 CDCA7LQ96GN5 454 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 ARXQ96QS3 562 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 SETDB2Q96T68 719 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 SGIP1Q9BQI5 828 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 TBC1D2BQ9UPU7 963 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 ZNF330Q9Y3S2 320 aaPredicted RBP8.45□□□□□ -1.06
PRKCH-217ENST00000555604 PARP3Q9Y6F1 533 aa8.45□□□□□ -1.06
PRKCH-217ENST00000555604 SLC4A2P04920 1241 aa8.44□□□□□ -1.06
PRKCH-217ENST00000555604 PTGER2P43116 358 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms