RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 TMPOP42166 694 aaKnown RBP18.09■□□□□ 0.49
SNX6-203ENST00000555416 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
SNX6-203ENST00000555416 TAF7Q15545 349 aaPredicted RBP18.09■□□□□ 0.49
SNX6-203ENST00000555416 FMNL2Q96PY5 1086 aa18.09■□□□□ 0.49
SNX6-203ENST00000555416 PNNQ9H307 717 aaKnown RBP18.09■□□□□ 0.49
SNX6-203ENST00000555416 RFC4P35249 363 aa18.08■□□□□ 0.48
SNX6-203ENST00000555416 RIPK4P57078 832 aa18.08■□□□□ 0.48
SNX6-203ENST00000555416 MMP10P09238 476 aa18.07■□□□□ 0.48
SNX6-203ENST00000555416 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
SNX6-203ENST00000555416 USP16Q9Y5T5 823 aa18.07■□□□□ 0.48
SNX6-203ENST00000555416 USP42Q9H9J4 1324 aaKnown RBP18.06■□□□□ 0.48
SNX6-203ENST00000555416 A1BGP04217 495 aa18.06■□□□□ 0.48
SNX6-203ENST00000555416 FKBP8Q14318 412 aa18.06■□□□□ 0.48
SNX6-203ENST00000555416 NEUROD2Q15784 382 aa18.06■□□□□ 0.48
SNX6-203ENST00000555416 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
SNX6-203ENST00000555416 KDM3BQ7LBC6 1761 aa18.05■□□□□ 0.48
SNX6-203ENST00000555416 STARD3NLO95772 234 aa18.05■□□□□ 0.48
SNX6-203ENST00000555416 PIP4K2AP48426 406 aaPredicted RBP18.05■□□□□ 0.48
SNX6-203ENST00000555416 COL15A1P39059 1388 aa18.04■□□□□ 0.48
SNX6-203ENST00000555416 EIF5P55010 431 aaKnown RBP18.04■□□□□ 0.48
SNX6-203ENST00000555416 TRIM35Q9UPQ4 493 aa18.04■□□□□ 0.48
SNX6-203ENST00000555416 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
SNX6-203ENST00000555416 NLGN1Q8N2Q7 840 aa18.03■□□□□ 0.48
SNX6-203ENST00000555416 TEX13AQ9BXU3 409 aaPredicted RBP18.03■□□□□ 0.48
SNX6-203ENST00000555416 BCL2L12Q9HB09 334 aa18.03■□□□□ 0.48
SNX6-203ENST00000555416 SNRPA1P09661 255 aaKnown RBP18.02■□□□□ 0.48
SNX6-203ENST00000555416 DDR1Q08345 913 aa18.02■□□□□ 0.48
SNX6-203ENST00000555416 EIF4A1P60842 406 aaKnown RBP18.01■□□□□ 0.47
SNX6-203ENST00000555416 GOLGB1Q14789 3259 aaKnown RBP18■□□□□ 0.47
SNX6-203ENST00000555416 NBPF26B4DH59 902 aa18■□□□□ 0.47
SNX6-203ENST00000555416 ANP32CO43423 234 aa18■□□□□ 0.47
SNX6-203ENST00000555416 NBPF10Q6P3W6 841 aaKnown RBP18■□□□□ 0.47
SNX6-203ENST00000555416 NBPF15Q8N660 670 aa18■□□□□ 0.47
SNX6-203ENST00000555416 NARFQ9UHQ1 456 aa18■□□□□ 0.47
SNX6-203ENST00000555416 ZNF330Q9Y3S2 320 aaPredicted RBP18■□□□□ 0.47
SNX6-203ENST00000555416 CD2APQ9Y5K6 639 aa18■□□□□ 0.47
SNX6-203ENST00000555416 SENP3-EIF4A1A0A087X0R7 540 aa17.99■□□□□ 0.47
SNX6-203ENST00000555416 APAF1O14727 1248 aa17.99■□□□□ 0.47
SNX6-203ENST00000555416 ZPR1O75312 459 aa17.99■□□□□ 0.47
SNX6-203ENST00000555416 TM4SF1P30408 202 aa17.99■□□□□ 0.47
SNX6-203ENST00000555416 PNISRQ8TF01 805 aaKnown RBP17.99■□□□□ 0.47
SNX6-203ENST00000555416 TBC1D2BQ9UPU7 963 aa17.99■□□□□ 0.47
SNX6-203ENST00000555416 UTRNP46939 3433 aa17.98■□□□□ 0.47
SNX6-203ENST00000555416 GIGYF1O75420 1035 aaPredicted RBP17.98■□□□□ 0.47
SNX6-203ENST00000555416 IL6STP40189 918 aaPredicted RBP17.98■□□□□ 0.47
SNX6-203ENST00000555416 POLRMTO00411 1230 aaKnown RBP17.97■□□□□ 0.47
SNX6-203ENST00000555416 YBX3P16989 372 aaKnown RBP eCLIP17.97■□□□□ 0.475e-10■■□□□ 13
SNX6-203ENST00000555416 LMOD3Q0VAK6 560 aa17.97■□□□□ 0.47
SNX6-203ENST00000555416 NFIXQ14938 502 aa17.97■□□□□ 0.47
SNX6-203ENST00000555416 MRS2Q9HD23 443 aa17.97■□□□□ 0.47
SNX6-203ENST00000555416 TSPYL4Q9UJ04 414 aa17.97■□□□□ 0.47
SNX6-203ENST00000555416 WWC3Q9ULE0 1092 aa17.97■□□□□ 0.47
SNX6-203ENST00000555416 C10orf71Q711Q0 1435 aa17.97■□□□□ 0.47
SNX6-203ENST00000555416 KIAA1551Q9HCM1 1747 aa17.96■□□□□ 0.47
SNX6-203ENST00000555416 PELP1Q8IZL8 1130 aaKnown RBP17.96■□□□□ 0.47
SNX6-203ENST00000555416 PARP3Q9Y6F1 533 aa17.96■□□□□ 0.47
SNX6-203ENST00000555416 KIF13BQ9NQT8 1826 aa17.95■□□□□ 0.46
SNX6-203ENST00000555416 LAMB4A4D0S4 1761 aa17.95■□□□□ 0.46
SNX6-203ENST00000555416 CAMTA2O94983 1202 aa17.95■□□□□ 0.46
SNX6-203ENST00000555416 KRT24Q2M2I5 525 aa17.95■□□□□ 0.46
SNX6-203ENST00000555416 SCN7AQ01118 1682 aa17.95■□□□□ 0.46
SNX6-203ENST00000555416 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
SNX6-203ENST00000555416 A0A087WZG4 1122 aa17.94■□□□□ 0.46
SNX6-203ENST00000555416 CHL1O00533 1208 aa17.94■□□□□ 0.46
SNX6-203ENST00000555416 GPR162Q16538 588 aa17.94■□□□□ 0.46
SNX6-203ENST00000555416 TBC1D9BQ66K14 1250 aa17.94■□□□□ 0.46
SNX6-203ENST00000555416 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
SNX6-203ENST00000555416 BICDL1Q6ZP65 573 aa17.93■□□□□ 0.46
SNX6-203ENST00000555416 DZIP3Q86Y13 1208 aaKnown RBP17.93■□□□□ 0.46
SNX6-203ENST00000555416 LAS1LQ9Y4W2 734 aaKnown RBP17.93■□□□□ 0.46
SNX6-203ENST00000555416 N4BP2Q86UW6 1770 aaPredicted RBP17.93■□□□□ 0.46
SNX6-203ENST00000555416 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
SNX6-203ENST00000555416 AFDNP55196 1824 aaKnown RBP17.91■□□□□ 0.46
SNX6-203ENST00000555416 BABAM1Q9NWV8 329 aa17.91■□□□□ 0.46
SNX6-203ENST00000555416 BCORQ6W2J9 1755 aa17.91■□□□□ 0.46
SNX6-203ENST00000555416 NRXN2Q9P2S2 1712 aa17.9■□□□□ 0.46
SNX6-203ENST00000555416 SERPINB2P05120 415 aa17.9■□□□□ 0.46
SNX6-203ENST00000555416 DPEP1P16444 411 aa17.9■□□□□ 0.46
SNX6-203ENST00000555416 CARMIL3Q8ND23 1372 aa17.9■□□□□ 0.46
SNX6-203ENST00000555416 ZNF853P0CG23 659 aa17.89■□□□□ 0.45
SNX6-203ENST00000555416 KCNA3P22001 575 aa17.89■□□□□ 0.45
SNX6-203ENST00000555416 PDIA6Q15084 440 aa17.89■□□□□ 0.45
SNX6-203ENST00000555416 NGEFQ8N5V2 710 aa17.89■□□□□ 0.45
SNX6-203ENST00000555416 NECTIN2Q92692 538 aa17.89■□□□□ 0.45
SNX6-203ENST00000555416 ANXA1P04083 346 aa17.88■□□□□ 0.45
SNX6-203ENST00000555416 MYL6BP14649 208 aa17.88■□□□□ 0.45
SNX6-203ENST00000555416 EIF2S2P20042 333 aaKnown RBP17.88■□□□□ 0.45
SNX6-203ENST00000555416 TGFB2P61812 414 aa17.88■□□□□ 0.45
SNX6-203ENST00000555416 PROSER3Q2NL68 480 aa17.88■□□□□ 0.45
SNX6-203ENST00000555416 TTLL7Q6ZT98 887 aa17.88■□□□□ 0.45
SNX6-203ENST00000555416 LRP10Q7Z4F1 713 aa17.88■□□□□ 0.45
SNX6-203ENST00000555416 CCDC24Q8N4L8 307 aa17.88■□□□□ 0.45
SNX6-203ENST00000555416 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
SNX6-203ENST00000555416 MBIPQ9NS73 344 aa17.88■□□□□ 0.45
SNX6-203ENST00000555416 YY1P25490 414 aa17.87■□□□□ 0.45
SNX6-203ENST00000555416 CHRNA5P30532 468 aa17.87■□□□□ 0.45
SNX6-203ENST00000555416 HLFQ16534 295 aa17.87■□□□□ 0.45
SNX6-203ENST00000555416 NPM2Q86SE8 214 aaKnown RBP17.86■□□□□ 0.45
SNX6-203ENST00000555416 BRCA1P38398 1863 aaKnown RBP17.84■□□□□ 0.45
SNX6-203ENST00000555416 PRR5LQ6MZQ0 368 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms