RNA–Protein interactions for RNA: ENST00000554543.1

ITGA7-210, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 707 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-210ENST00000554543 RPS6KA4O75676 772 aa16.55■□□□□ 0.24
ITGA7-210ENST00000554543 A1BGP04217 495 aa16.55■□□□□ 0.24
ITGA7-210ENST00000554543 RFC4P35249 363 aa16.55■□□□□ 0.24
ITGA7-210ENST00000554543 RIPK4P57078 832 aa16.55■□□□□ 0.24
ITGA7-210ENST00000554543 UTRNP46939 3433 aa16.55■□□□□ 0.24
ITGA7-210ENST00000554543 FLAD1Q8NFF5 587 aa16.54■□□□□ 0.24
ITGA7-210ENST00000554543 LAMB4A4D0S4 1761 aa16.54■□□□□ 0.24
ITGA7-210ENST00000554543 MMP10P09238 476 aa16.53■□□□□ 0.24
ITGA7-210ENST00000554543 TMPOP42166 694 aaKnown RBP16.53■□□□□ 0.24
ITGA7-210ENST00000554543 RC3H1Q5TC82 1133 aaKnown RBP16.53■□□□□ 0.24
ITGA7-210ENST00000554543 FMNL2Q96PY5 1086 aa16.53■□□□□ 0.24
ITGA7-210ENST00000554543 AFDNP55196 1824 aaKnown RBP16.52■□□□□ 0.24
ITGA7-210ENST00000554543 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.24
ITGA7-210ENST00000554543 GYS1P13807 737 aa16.52■□□□□ 0.24
ITGA7-210ENST00000554543 FKBP8Q14318 412 aa16.52■□□□□ 0.24
ITGA7-210ENST00000554543 LAS1LQ9Y4W2 734 aaKnown RBP16.52■□□□□ 0.24
ITGA7-210ENST00000554543 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
ITGA7-210ENST00000554543 COL15A1P39059 1388 aa16.51■□□□□ 0.23
ITGA7-210ENST00000554543 TAF7Q15545 349 aaPredicted RBP16.51■□□□□ 0.23
ITGA7-210ENST00000554543 USPL1Q5W0Q7 1092 aa16.51■□□□□ 0.23
ITGA7-210ENST00000554543 ANP32CO43423 234 aa16.5■□□□□ 0.23
ITGA7-210ENST00000554543 SCN7AQ01118 1682 aa16.5■□□□□ 0.23
ITGA7-210ENST00000554543 KRT24Q2M2I5 525 aa16.49■□□□□ 0.23
ITGA7-210ENST00000554543 BICDL1Q6ZP65 573 aa16.49■□□□□ 0.23
ITGA7-210ENST00000554543 NGEFQ8N5V2 710 aa16.49■□□□□ 0.23
ITGA7-210ENST00000554543 RUNDC1Q96C34 613 aa16.49■□□□□ 0.23
ITGA7-210ENST00000554543 KIAA1551Q9HCM1 1747 aa16.49■□□□□ 0.23
ITGA7-210ENST00000554543 MRS2Q9HD23 443 aa16.49■□□□□ 0.23
ITGA7-210ENST00000554543 TBC1D2BQ9UPU7 963 aa16.49■□□□□ 0.23
ITGA7-210ENST00000554543 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
ITGA7-210ENST00000554543 APAF1O14727 1248 aa16.48■□□□□ 0.23
ITGA7-210ENST00000554543 HTATSF1O43719 755 aaKnown RBP16.48■□□□□ 0.23
ITGA7-210ENST00000554543 DDR1Q08345 913 aa16.48■□□□□ 0.23
ITGA7-210ENST00000554543 NECTIN2Q92692 538 aa16.48■□□□□ 0.23
ITGA7-210ENST00000554543 PNNQ9H307 717 aaKnown RBP16.48■□□□□ 0.23
ITGA7-210ENST00000554543 TSPYL4Q9UJ04 414 aa16.48■□□□□ 0.23
ITGA7-210ENST00000554543 BCORQ6W2J9 1755 aa16.48■□□□□ 0.23
ITGA7-210ENST00000554543 STARD3NLO95772 234 aa16.47■□□□□ 0.23
ITGA7-210ENST00000554543 VSIG10Q8N0Z9 540 aa16.47■□□□□ 0.23
ITGA7-210ENST00000554543 CCDC24Q8N4L8 307 aa16.47■□□□□ 0.23
ITGA7-210ENST00000554543 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
ITGA7-210ENST00000554543 SALL2Q9Y467 1007 aaPredicted RBP16.47■□□□□ 0.23
ITGA7-210ENST00000554543 ZPR1O75312 459 aa16.46■□□□□ 0.23
ITGA7-210ENST00000554543 GPR162Q16538 588 aa16.46■□□□□ 0.23
ITGA7-210ENST00000554543 BCL2L12Q9HB09 334 aa16.46■□□□□ 0.23
ITGA7-210ENST00000554543 KIF13BQ9NQT8 1826 aa16.46■□□□□ 0.23
ITGA7-210ENST00000554543 YBX3P16989 372 aaKnown RBP eCLIP16.45■□□□□ 0.22
ITGA7-210ENST00000554543 ADRA2BP18089 450 aa16.45■□□□□ 0.22
ITGA7-210ENST00000554543 CACNA1SQ13698 1873 aa16.45■□□□□ 0.22
ITGA7-210ENST00000554543 NBPF26B4DH59 902 aa16.44■□□□□ 0.22
ITGA7-210ENST00000554543 ANXA1P04083 346 aa16.44■□□□□ 0.22
ITGA7-210ENST00000554543 SNRPA1P09661 255 aaKnown RBP16.44■□□□□ 0.22
ITGA7-210ENST00000554543 EIF4A1P60842 406 aaKnown RBP16.44■□□□□ 0.22
ITGA7-210ENST00000554543 NBPF10Q6P3W6 841 aaKnown RBP16.44■□□□□ 0.22
ITGA7-210ENST00000554543 NBPF15Q8N660 670 aa16.44■□□□□ 0.22
ITGA7-210ENST00000554543 PARP3Q9Y6F1 533 aa16.44■□□□□ 0.22
ITGA7-210ENST00000554543 MYL6BP14649 208 aa16.43■□□□□ 0.22
ITGA7-210ENST00000554543 EIF5P55010 431 aaKnown RBP16.43■□□□□ 0.22
ITGA7-210ENST00000554543 NARFQ9UHQ1 456 aa16.43■□□□□ 0.22
ITGA7-210ENST00000554543 CHD4Q14839 1912 aa16.43■□□□□ 0.22
ITGA7-210ENST00000554543 ANKRD31Q8N7Z5 1873 aa16.42■□□□□ 0.22
ITGA7-210ENST00000554543 A0A0G2JLW4 131 aa16.42■□□□□ 0.22
ITGA7-210ENST00000554543 EIF2S2P20042 333 aaKnown RBP16.42■□□□□ 0.22
ITGA7-210ENST00000554543 HMGB2P26583 209 aaKnown RBP16.42■□□□□ 0.22
ITGA7-210ENST00000554543 NFIXQ14938 502 aa16.42■□□□□ 0.22
ITGA7-210ENST00000554543 TBC1D9BQ66K14 1250 aa16.42■□□□□ 0.22
ITGA7-210ENST00000554543 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
ITGA7-210ENST00000554543 NLGN1Q8N2Q7 840 aa16.42■□□□□ 0.22
ITGA7-210ENST00000554543 ZNF428Q96B54 188 aa16.42■□□□□ 0.22
ITGA7-210ENST00000554543 CARMIL3Q8ND23 1372 aa16.41■□□□□ 0.22
ITGA7-210ENST00000554543 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
ITGA7-210ENST00000554543 FAM177BA6PVY3 158 aa16.41■□□□□ 0.22
ITGA7-210ENST00000554543 BRCA1P38398 1863 aaKnown RBP16.41■□□□□ 0.22
ITGA7-210ENST00000554543 PXDNLA1KZ92 1463 aa16.41■□□□□ 0.22
ITGA7-210ENST00000554543 NUP98P52948 1817 aa16.4■□□□□ 0.22
ITGA7-210ENST00000554543 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
ITGA7-210ENST00000554543 POLRMTO00411 1230 aaKnown RBP16.4■□□□□ 0.22
ITGA7-210ENST00000554543 GIGYF1O75420 1035 aaPredicted RBP16.4■□□□□ 0.22
ITGA7-210ENST00000554543 CHRNA5P30532 468 aa16.4■□□□□ 0.22
ITGA7-210ENST00000554543 DZIP3Q86Y13 1208 aaKnown RBP16.4■□□□□ 0.22
ITGA7-210ENST00000554543 PNISRQ8TF01 805 aaKnown RBP16.4■□□□□ 0.22
ITGA7-210ENST00000554543 TEX13AQ9BXU3 409 aaPredicted RBP16.4■□□□□ 0.22
ITGA7-210ENST00000554543 COL11A2P13942 1736 aaPredicted RBP16.39■□□□□ 0.21
ITGA7-210ENST00000554543 DPEP1P16444 411 aa16.39■□□□□ 0.21
ITGA7-210ENST00000554543 LMOD3Q0VAK6 560 aa16.39■□□□□ 0.21
ITGA7-210ENST00000554543 PROSER3Q2NL68 480 aa16.39■□□□□ 0.21
ITGA7-210ENST00000554543 CD2APQ9Y5K6 639 aa16.39■□□□□ 0.21
ITGA7-210ENST00000554543 CAMTA2O94983 1202 aa16.38■□□□□ 0.21
ITGA7-210ENST00000554543 TM4SF1P30408 202 aa16.38■□□□□ 0.21
ITGA7-210ENST00000554543 IL6STP40189 918 aaPredicted RBP16.38■□□□□ 0.21
ITGA7-210ENST00000554543 TTLL7Q6ZT98 887 aa16.38■□□□□ 0.21
ITGA7-210ENST00000554543 NRXN2Q9P2S2 1712 aa16.38■□□□□ 0.21
ITGA7-210ENST00000554543 ELL2O00472 640 aaPredicted RBP16.37■□□□□ 0.21
ITGA7-210ENST00000554543 YY1P25490 414 aa16.37■□□□□ 0.21
ITGA7-210ENST00000554543 HLFQ16534 295 aa16.37■□□□□ 0.21
ITGA7-210ENST00000554543 NPM2Q86SE8 214 aaKnown RBP16.37■□□□□ 0.21
ITGA7-210ENST00000554543 SERPINB2P05120 415 aa16.36■□□□□ 0.21
ITGA7-210ENST00000554543 ZBTB3Q9H5J0 574 aa16.36■□□□□ 0.21
ITGA7-210ENST00000554543 MBIPQ9NS73 344 aa16.36■□□□□ 0.21
ITGA7-210ENST00000554543 A0A087WZG4 1122 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms