RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 AMIGO3Q86WK7 504 aa18.01■□□□□ 0.47
NUMB-209ENST00000554315 VIRMAQ69YN4 1812 aaKnown RBP18■□□□□ 0.47
NUMB-209ENST00000554315 ZPR1O75312 459 aa18■□□□□ 0.47
NUMB-209ENST00000554315 CANXP27824 592 aaKnown RBP18■□□□□ 0.47
NUMB-209ENST00000554315 SMIM5Q71RC9 77 aa18■□□□□ 0.47
NUMB-209ENST00000554315 EIF4A1P60842 406 aaKnown RBP17.99■□□□□ 0.47
NUMB-209ENST00000554315 USP16Q9Y5T5 823 aa17.99■□□□□ 0.47
NUMB-209ENST00000554315 IL6STP40189 918 aaPredicted RBP17.98■□□□□ 0.47
NUMB-209ENST00000554315 FAM9BQ8IZU0 186 aa17.98■□□□□ 0.47
NUMB-209ENST00000554315 ZBTB1Q9Y2K1 713 aa17.98■□□□□ 0.47
NUMB-209ENST00000554315 LAS1LQ9Y4W2 734 aaKnown RBP17.98■□□□□ 0.47
NUMB-209ENST00000554315 CHL1O00533 1208 aa17.98■□□□□ 0.47
NUMB-209ENST00000554315 MSL1Q68DK7 614 aa17.98■□□□□ 0.47
NUMB-209ENST00000554315 SOS1Q07889 1333 aaPredicted RBP17.97■□□□□ 0.47
NUMB-209ENST00000554315 SIPA1L3O60292 1781 aaPredicted RBP17.97■□□□□ 0.47
NUMB-209ENST00000554315 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
NUMB-209ENST00000554315 GIGYF1O75420 1035 aaPredicted RBP17.97■□□□□ 0.47
NUMB-209ENST00000554315 A1BGP04217 495 aa17.97■□□□□ 0.47
NUMB-209ENST00000554315 EIF5P55010 431 aaKnown RBP17.97■□□□□ 0.47
NUMB-209ENST00000554315 CCDC27Q2M243 656 aa17.97■□□□□ 0.47
NUMB-209ENST00000554315 DIEXFQ68CQ4 756 aaKnown RBP17.97■□□□□ 0.47
NUMB-209ENST00000554315 NGEFQ8N5V2 710 aa17.97■□□□□ 0.47
NUMB-209ENST00000554315 CFAP44Q96MT7 982 aa17.97■□□□□ 0.47
NUMB-209ENST00000554315 DLG5Q8TDM6 1919 aa17.96■□□□□ 0.47
NUMB-209ENST00000554315 CCER2I3L3R5 266 aa17.96■□□□□ 0.47
NUMB-209ENST00000554315 GNAI1P63096 354 aa17.95■□□□□ 0.46
NUMB-209ENST00000554315 NARFQ9UHQ1 456 aa17.95■□□□□ 0.46
NUMB-209ENST00000554315 CICQ96RK0 1608 aaPredicted RBP17.95■□□□□ 0.46
NUMB-209ENST00000554315 UBR3Q6ZT12 1888 aa17.95■□□□□ 0.46
NUMB-209ENST00000554315 GYS1P13807 737 aa17.95■□□□□ 0.46
NUMB-209ENST00000554315 COL5A3P25940 1745 aaPredicted RBP17.94■□□□□ 0.46
NUMB-209ENST00000554315 UBR2Q8IWV8 1755 aa17.94■□□□□ 0.46
NUMB-209ENST00000554315 SYT17Q9BSW7 474 aa17.94■□□□□ 0.46
NUMB-209ENST00000554315 FHDC1Q9C0D6 1143 aaPredicted RBP17.94■□□□□ 0.46
NUMB-209ENST00000554315 IFT57Q9NWB7 429 aa17.94■□□□□ 0.46
NUMB-209ENST00000554315 USP42Q9H9J4 1324 aaKnown RBP17.94■□□□□ 0.46
NUMB-209ENST00000554315 ZNF330Q9Y3S2 320 aaPredicted RBP17.93■□□□□ 0.46
NUMB-209ENST00000554315 TJP1Q07157 1748 aa17.92■□□□□ 0.46
NUMB-209ENST00000554315 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
NUMB-209ENST00000554315 CHMP4AQ9BY43 222 aa17.92■□□□□ 0.46
NUMB-209ENST00000554315 PARP3Q9Y6F1 533 aa17.92■□□□□ 0.46
NUMB-209ENST00000554315 TUBGCP6Q96RT7 1819 aa17.92■□□□□ 0.46
NUMB-209ENST00000554315 COL15A1P39059 1388 aa17.92■□□□□ 0.46
NUMB-209ENST00000554315 MYH14Q7Z406 1995 aaKnown RBP17.92■□□□□ 0.46
NUMB-209ENST00000554315 MMP10P09238 476 aa17.92■□□□□ 0.46
NUMB-209ENST00000554315 USPL1Q5W0Q7 1092 aa17.92■□□□□ 0.46
NUMB-209ENST00000554315 SRP68Q9UHB9 627 aaKnown RBP17.92■□□□□ 0.46
NUMB-209ENST00000554315 CD2APQ9Y5K6 639 aa17.92■□□□□ 0.46
NUMB-209ENST00000554315 WWC1Q8IX03 1113 aa17.91■□□□□ 0.46
NUMB-209ENST00000554315 KLHL34Q8N239 644 aa17.91■□□□□ 0.46
NUMB-209ENST00000554315 ZNF853P0CG23 659 aa17.9■□□□□ 0.46
NUMB-209ENST00000554315 ERBB4Q15303 1308 aa17.89■□□□□ 0.46
NUMB-209ENST00000554315 FKBP8Q14318 412 aa17.89■□□□□ 0.46
NUMB-209ENST00000554315 TBC1D2BQ9UPU7 963 aa17.89■□□□□ 0.46
NUMB-209ENST00000554315 HOXB7P09629 217 aa17.89■□□□□ 0.45
NUMB-209ENST00000554315 EIF2S2P20042 333 aaKnown RBP17.89■□□□□ 0.45
NUMB-209ENST00000554315 TM4SF1P30408 202 aa17.89■□□□□ 0.45
NUMB-209ENST00000554315 DZIP3Q86Y13 1208 aaKnown RBP17.89■□□□□ 0.45
NUMB-209ENST00000554315 WDR63Q8IWG1 891 aa17.89■□□□□ 0.45
NUMB-209ENST00000554315 IL16Q14005 1332 aa17.88■□□□□ 0.45
NUMB-209ENST00000554315 RGL2O15211 777 aa17.88■□□□□ 0.45
NUMB-209ENST00000554315 CLEC4GQ6UXB4 293 aa17.88■□□□□ 0.45
NUMB-209ENST00000554315 MBIPQ9NS73 344 aa17.88■□□□□ 0.45
NUMB-209ENST00000554315 NBPF26B4DH59 902 aa17.87■□□□□ 0.45
NUMB-209ENST00000554315 NBPF10Q6P3W6 841 aaKnown RBP17.87■□□□□ 0.45
NUMB-209ENST00000554315 NBPF15Q8N660 670 aa17.87■□□□□ 0.45
NUMB-209ENST00000554315 ZNF652Q9Y2D9 606 aa17.87■□□□□ 0.45
NUMB-209ENST00000554315 SALL2Q9Y467 1007 aaPredicted RBP17.86■□□□□ 0.45
NUMB-209ENST00000554315 PIP4K2AP48426 406 aaPredicted RBP17.86■□□□□ 0.45
NUMB-209ENST00000554315 COL24A1Q17RW2 1714 aa17.85■□□□□ 0.45
NUMB-209ENST00000554315 KDM3BQ7LBC6 1761 aa17.84■□□□□ 0.45
NUMB-209ENST00000554315 CAMTA2O94983 1202 aa17.84■□□□□ 0.45
NUMB-209ENST00000554315 MYL6BP14649 208 aa17.84■□□□□ 0.45
NUMB-209ENST00000554315 DUSP27Q5VZP5 1158 aa17.84■□□□□ 0.45
NUMB-209ENST00000554315 SETDB2Q96T68 719 aa17.84■□□□□ 0.45
NUMB-209ENST00000554315 BCL2L12Q9HB09 334 aa17.84■□□□□ 0.45
NUMB-209ENST00000554315 ERVV-1B6SEH8 477 aa17.84■□□□□ 0.45
NUMB-209ENST00000554315 TGFB2P61812 414 aa17.84■□□□□ 0.45
NUMB-209ENST00000554315 NFIXQ14938 502 aa17.84■□□□□ 0.45
NUMB-209ENST00000554315 KIF6Q6ZMV9 814 aa17.84■□□□□ 0.45
NUMB-209ENST00000554315 HDGFL1Q5TGJ6 251 aa17.83■□□□□ 0.44
NUMB-209ENST00000554315 DDX21Q9NR30 783 aaKnown RBP eCLIP17.83■□□□□ 0.44
NUMB-209ENST00000554315 SENP3-EIF4A1A0A087X0R7 540 aa17.82■□□□□ 0.44
NUMB-209ENST00000554315 POLRMTO00411 1230 aaKnown RBP17.82■□□□□ 0.44
NUMB-209ENST00000554315 SERPINB2P05120 415 aa17.82■□□□□ 0.44
NUMB-209ENST00000554315 MIER1Q8N108 512 aa17.82■□□□□ 0.44
NUMB-209ENST00000554315 DBF4Q9UBU7 674 aaPredicted RBP17.82■□□□□ 0.44
NUMB-209ENST00000554315 KRT24Q2M2I5 525 aa17.81■□□□□ 0.44
NUMB-209ENST00000554315 BICDL1Q6ZP65 573 aa17.81■□□□□ 0.44
NUMB-209ENST00000554315 DDR1Q08345 913 aa17.81■□□□□ 0.44
NUMB-209ENST00000554315 TBC1D9BQ66K14 1250 aa17.81■□□□□ 0.44
NUMB-209ENST00000554315 NECTIN2Q92692 538 aa17.81■□□□□ 0.44
NUMB-209ENST00000554315 GOLGA2Q08379 1002 aa17.8■□□□□ 0.44
NUMB-209ENST00000554315 PDIA6Q15084 440 aa17.8■□□□□ 0.44
NUMB-209ENST00000554315 GPR162Q16538 588 aa17.8■□□□□ 0.44
NUMB-209ENST00000554315 MYH16Q9H6N6 1097 aa17.8■□□□□ 0.44
NUMB-209ENST00000554315 HYPKQ9NX55 129 aa17.8■□□□□ 0.44
NUMB-209ENST00000554315 ELL2O00472 640 aaPredicted RBP17.79■□□□□ 0.44
NUMB-209ENST00000554315 NPHP1O15259 732 aa17.79■□□□□ 0.44
NUMB-209ENST00000554315 CCDC30Q5VVM6 783 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms