RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 ZNF827Q17R98 1081 aa23.92■■□□□ 1.42
PSEN1-210ENST00000554131 AKT1S1Q96B36 256 aa23.92■■□□□ 1.42
PSEN1-210ENST00000554131 CNTNAP4Q9C0A0 1308 aa23.91■■□□□ 1.42
PSEN1-210ENST00000554131 QSER1Q2KHR3 1735 aa23.91■■□□□ 1.42
PSEN1-210ENST00000554131 HOXB7P09629 217 aa23.91■■□□□ 1.42
PSEN1-210ENST00000554131 TEX13AQ9BXU3 409 aaPredicted RBP23.91■■□□□ 1.42
PSEN1-210ENST00000554131 EXOSC9Q06265 439 aaKnown RBP23.9■■□□□ 1.42
PSEN1-210ENST00000554131 INTS5Q6P9B9 1019 aaKnown RBP23.9■■□□□ 1.42
PSEN1-210ENST00000554131 CRKLP46109 303 aaKnown RBP23.89■■□□□ 1.41
PSEN1-210ENST00000554131 RC3H1Q5TC82 1133 aaKnown RBP23.89■■□□□ 1.41
PSEN1-210ENST00000554131 AMIGO3Q86WK7 504 aa23.89■■□□□ 1.41
PSEN1-210ENST00000554131 YTHDC1Q96MU7 727 aaKnown RBP23.89■■□□□ 1.41
PSEN1-210ENST00000554131 SOS1Q07889 1333 aaPredicted RBP23.86■■□□□ 1.41
PSEN1-210ENST00000554131 ELL2O00472 640 aaPredicted RBP23.86■■□□□ 1.41
PSEN1-210ENST00000554131 STARD3NLO95772 234 aa23.86■■□□□ 1.41
PSEN1-210ENST00000554131 A1BGP04217 495 aa23.86■■□□□ 1.41
PSEN1-210ENST00000554131 CCDC87Q9NVE4 849 aa23.86■■□□□ 1.41
PSEN1-210ENST00000554131 ZBTB1Q9Y2K1 713 aa23.86■■□□□ 1.41
PSEN1-210ENST00000554131 NBPF26B4DH59 902 aa23.85■■□□□ 1.41
PSEN1-210ENST00000554131 VAMP4O75379 141 aa23.85■■□□□ 1.41
PSEN1-210ENST00000554131 SLC15A2Q16348 729 aa23.85■■□□□ 1.41
PSEN1-210ENST00000554131 TWISTNBQ3B726 338 aaPredicted RBP23.85■■□□□ 1.41
PSEN1-210ENST00000554131 NBPF14Q5TI25 921 aa23.85■■□□□ 1.41
PSEN1-210ENST00000554131 NBPF10Q6P3W6 841 aaKnown RBP23.85■■□□□ 1.41
PSEN1-210ENST00000554131 NBPF15Q8N660 670 aa23.85■■□□□ 1.41
PSEN1-210ENST00000554131 HMGB2P26583 209 aaKnown RBP23.84■■□□□ 1.41
PSEN1-210ENST00000554131 PDIA6Q15084 440 aa23.84■■□□□ 1.41
PSEN1-210ENST00000554131 C4AP0C0L4 1744 aa23.84■■□□□ 1.41
PSEN1-210ENST00000554131 LRP10Q7Z4F1 713 aa23.83■■□□□ 1.41
PSEN1-210ENST00000554131 RPS6KA4O75676 772 aa23.82■■□□□ 1.4
PSEN1-210ENST00000554131 EIF2S2P20042 333 aaKnown RBP23.82■■□□□ 1.4
PSEN1-210ENST00000554131 PIP4K2AP48426 406 aaPredicted RBP23.82■■□□□ 1.4
PSEN1-210ENST00000554131 SMIM5Q71RC9 77 aa23.82■■□□□ 1.4
PSEN1-210ENST00000554131 ERBB4Q15303 1308 aa23.82■■□□□ 1.4
PSEN1-210ENST00000554131 GNPATO15228 680 aa23.81■■□□□ 1.4
PSEN1-210ENST00000554131 HDGFL1Q5TGJ6 251 aa23.81■■□□□ 1.4
PSEN1-210ENST00000554131 AK7Q96M32 723 aa23.81■■□□□ 1.4
PSEN1-210ENST00000554131 STK32BQ9NY57 414 aa23.81■■□□□ 1.4
PSEN1-210ENST00000554131 CASZ1Q86V15 1759 aa23.8■■□□□ 1.4
PSEN1-210ENST00000554131 EIF5P55010 431 aaKnown RBP23.8■■□□□ 1.4
PSEN1-210ENST00000554131 PROSER3Q2NL68 480 aa23.8■■□□□ 1.4
PSEN1-210ENST00000554131 NECTIN2Q92692 538 aa23.8■■□□□ 1.4
PSEN1-210ENST00000554131 PNPLA7Q6ZV29 1317 aa23.8■■□□□ 1.4
PSEN1-210ENST00000554131 CANXP27824 592 aaKnown RBP23.79■■□□□ 1.4
PSEN1-210ENST00000554131 IL6STP40189 918 aaPredicted RBP23.78■■□□□ 1.4
PSEN1-210ENST00000554131 CHPF2Q9P2E5 772 aa23.78■■□□□ 1.4
PSEN1-210ENST00000554131 SSFA2P28290 1259 aa23.77■■□□□ 1.4
PSEN1-210ENST00000554131 DDX21Q9NR30 783 aaKnown RBP eCLIP23.77■■□□□ 1.4
PSEN1-210ENST00000554131 TFCP2L1Q9NZI6 479 aa23.77■■□□□ 1.4
PSEN1-210ENST00000554131 RTCBQ9Y3I0 505 aaKnown RBP23.77■■□□□ 1.4
PSEN1-210ENST00000554131 COL15A1P39059 1388 aa23.77■■□□□ 1.4
PSEN1-210ENST00000554131 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.76■■□□□ 1.39
PSEN1-210ENST00000554131 ANXA1P04083 346 aa23.76■■□□□ 1.39
PSEN1-210ENST00000554131 BCORQ6W2J9 1755 aa23.75■■□□□ 1.39
PSEN1-210ENST00000554131 CT47B1P0C2W7 299 aaPredicted RBP23.75■■□□□ 1.39
PSEN1-210ENST00000554131 CCDC30Q5VVM6 783 aa23.75■■□□□ 1.39
PSEN1-210ENST00000554131 COL23A1Q86Y22 540 aaPredicted RBP23.75■■□□□ 1.39
PSEN1-210ENST00000554131 SCN7AQ01118 1682 aa23.75■■□□□ 1.39
PSEN1-210ENST00000554131 CACNA1FO60840 1977 aa23.74■■□□□ 1.39
PSEN1-210ENST00000554131 ADRA2BP18089 450 aa23.74■■□□□ 1.39
PSEN1-210ENST00000554131 R3HDM1Q15032 1099 aaKnown RBP23.74■■□□□ 1.39
PSEN1-210ENST00000554131 ARHGEF1Q92888 912 aaKnown RBP23.74■■□□□ 1.39
PSEN1-210ENST00000554131 PDGFDQ9GZP0 370 aaPredicted RBP23.74■■□□□ 1.39
PSEN1-210ENST00000554131 DBF4Q9UBU7 674 aaPredicted RBP23.74■■□□□ 1.39
PSEN1-210ENST00000554131 TCERG1O14776 1098 aaKnown RBP23.73■■□□□ 1.39
PSEN1-210ENST00000554131 PHF14O94880 888 aa23.73■■□□□ 1.39
PSEN1-210ENST00000554131 MYL6BP14649 208 aa23.73■■□□□ 1.39
PSEN1-210ENST00000554131 ZNF428Q96B54 188 aa23.72■■□□□ 1.39
PSEN1-210ENST00000554131 COL24A1Q17RW2 1714 aa23.71■■□□□ 1.39
PSEN1-210ENST00000554131 TRAPPC3LQ5T215 181 aa23.71■■□□□ 1.39
PSEN1-210ENST00000554131 CHMP4AQ9BY43 222 aa23.71■■□□□ 1.39
PSEN1-210ENST00000554131 FLAD1Q8NFF5 587 aa23.7■■□□□ 1.38
PSEN1-210ENST00000554131 PHAXQ9H814 394 aaKnown RBP23.7■■□□□ 1.38
PSEN1-210ENST00000554131 USP42Q9H9J4 1324 aaKnown RBP23.69■■□□□ 1.38
PSEN1-210ENST00000554131 PSDA5PKW4 1024 aaPredicted RBP23.69■■□□□ 1.38
PSEN1-210ENST00000554131 TTLL7Q6ZT98 887 aa23.69■■□□□ 1.38
PSEN1-210ENST00000554131 SSH1Q8WYL5 1049 aa23.69■■□□□ 1.38
PSEN1-210ENST00000554131 HYPKQ9NX55 129 aa23.69■■□□□ 1.38
PSEN1-210ENST00000554131 SLC4A2P04920 1241 aa23.68■■□□□ 1.38
PSEN1-210ENST00000554131 RARSP54136 660 aaKnown RBP23.68■■□□□ 1.38
PSEN1-210ENST00000554131 ALDH1L2Q3SY69 923 aa23.68■■□□□ 1.38
PSEN1-210ENST00000554131 G2E3Q7L622 706 aa23.68■■□□□ 1.38
PSEN1-210ENST00000554131 MRPL50Q8N5N7 158 aaKnown RBP23.68■■□□□ 1.38
PSEN1-210ENST00000554131 XAGE3Q8WTP9 111 aa23.68■■□□□ 1.38
PSEN1-210ENST00000554131 BCL2L12Q9HB09 334 aa23.68■■□□□ 1.38
PSEN1-210ENST00000554131 SRP68Q9UHB9 627 aaKnown RBP23.68■■□□□ 1.38
PSEN1-210ENST00000554131 NARFQ9UHQ1 456 aa23.68■■□□□ 1.38
PSEN1-210ENST00000554131 A0A087WZG4 1122 aa23.67■■□□□ 1.38
PSEN1-210ENST00000554131 CAMTA2O94983 1202 aa23.67■■□□□ 1.38
PSEN1-210ENST00000554131 COPS6Q7L5N1 327 aa23.67■■□□□ 1.38
PSEN1-210ENST00000554131 STK31Q9BXU1 1019 aa23.67■■□□□ 1.38
PSEN1-210ENST00000554131 TBC1D2BQ9UPU7 963 aa23.67■■□□□ 1.38
PSEN1-210ENST00000554131 ZNF330Q9Y3S2 320 aaPredicted RBP23.67■■□□□ 1.38
PSEN1-210ENST00000554131 DZIP3Q86Y13 1208 aaKnown RBP23.66■■□□□ 1.38
PSEN1-210ENST00000554131 ARFGEF2Q9Y6D5 1785 aa23.65■■□□□ 1.38
PSEN1-210ENST00000554131 RFC4P35249 363 aa23.65■■□□□ 1.38
PSEN1-210ENST00000554131 BRPF1P55201 1214 aaPredicted RBP23.65■■□□□ 1.38
PSEN1-210ENST00000554131 NUP98P52948 1817 aa23.65■■□□□ 1.38
PSEN1-210ENST00000554131 GYS1P13807 737 aa23.64■■□□□ 1.37
PSEN1-210ENST00000554131 USPL1Q5W0Q7 1092 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms