RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 UTRNP46939 3433 aa14.66□□□□□ -0.06
IFT43-206ENST00000554026 GNPATO15228 680 aa14.65□□□□□ -0.06
IFT43-206ENST00000554026 RPS6KA4O75676 772 aa14.65□□□□□ -0.06
IFT43-206ENST00000554026 ZNF853P0CG23 659 aa14.65□□□□□ -0.06
IFT43-206ENST00000554026 CRKLP46109 303 aaKnown RBP14.65□□□□□ -0.06
IFT43-206ENST00000554026 NPM2Q86SE8 214 aaKnown RBP14.65□□□□□ -0.06
IFT43-206ENST00000554026 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
IFT43-206ENST00000554026 KCNQ3O43525 872 aa14.64□□□□□ -0.07
IFT43-206ENST00000554026 HOXB7P09629 217 aa14.64□□□□□ -0.07
IFT43-206ENST00000554026 SOS1Q07889 1333 aaPredicted RBP14.64□□□□□ -0.07
IFT43-206ENST00000554026 GIGYF1O75420 1035 aaPredicted RBP14.63□□□□□ -0.07
IFT43-206ENST00000554026 TRAPPC3LQ5T215 181 aa14.63□□□□□ -0.07
IFT43-206ENST00000554026 MYH16Q9H6N6 1097 aa14.63□□□□□ -0.07
IFT43-206ENST00000554026 PNPLA7Q6ZV29 1317 aa14.63□□□□□ -0.07
IFT43-206ENST00000554026 A0A087WZG4 1122 aa14.62□□□□□ -0.07
IFT43-206ENST00000554026 INTS5Q6P9B9 1019 aaKnown RBP14.62□□□□□ -0.07
IFT43-206ENST00000554026 UBR3Q6ZT12 1888 aa14.62□□□□□ -0.07
IFT43-206ENST00000554026 MBIPQ9NS73 344 aa14.62□□□□□ -0.07
IFT43-206ENST00000554026 SALL2Q9Y467 1007 aaPredicted RBP14.62□□□□□ -0.07
IFT43-206ENST00000554026 ERBB4Q15303 1308 aa14.62□□□□□ -0.07
IFT43-206ENST00000554026 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.61□□□□□ -0.07
IFT43-206ENST00000554026 MSH5O43196 834 aa14.61□□□□□ -0.07
IFT43-206ENST00000554026 IL6STP40189 918 aaPredicted RBP14.61□□□□□ -0.07
IFT43-206ENST00000554026 LAMB4A4D0S4 1761 aa14.6□□□□□ -0.07
IFT43-206ENST00000554026 ZBTB7AO95365 584 aa14.6□□□□□ -0.07
IFT43-206ENST00000554026 RFC4P35249 363 aa14.6□□□□□ -0.07
IFT43-206ENST00000554026 MTFR1LQ9H019 292 aa14.6□□□□□ -0.07
IFT43-206ENST00000554026 USP16Q9Y5T5 823 aa14.6□□□□□ -0.07
IFT43-206ENST00000554026 CHD4Q14839 1912 aa14.6□□□□□ -0.07
IFT43-206ENST00000554026 PHF14O94880 888 aa14.59□□□□□ -0.07
IFT43-206ENST00000554026 GOLGA2Q08379 1002 aa14.59□□□□□ -0.07
IFT43-206ENST00000554026 COL23A1Q86Y22 540 aaPredicted RBP14.59□□□□□ -0.07
IFT43-206ENST00000554026 PDGFDQ9GZP0 370 aaPredicted RBP14.59□□□□□ -0.07
IFT43-206ENST00000554026 MYH14Q7Z406 1995 aaKnown RBP14.59□□□□□ -0.07
IFT43-206ENST00000554026 ZNF521Q96K83 1311 aa14.59□□□□□ -0.07
IFT43-206ENST00000554026 TUBGCP6Q96RT7 1819 aa14.59□□□□□ -0.07
IFT43-206ENST00000554026 CANXP27824 592 aaKnown RBP14.58□□□□□ -0.08
IFT43-206ENST00000554026 EIF5P55010 431 aaKnown RBP14.58□□□□□ -0.08
IFT43-206ENST00000554026 ZBTB1Q9Y2K1 713 aa14.58□□□□□ -0.08
IFT43-206ENST00000554026 E9PSI1 815 aa14.57□□□□□ -0.08
IFT43-206ENST00000554026 RGL2O15211 777 aa14.57□□□□□ -0.08
IFT43-206ENST00000554026 ZPR1O75312 459 aa14.57□□□□□ -0.08
IFT43-206ENST00000554026 NLGN1Q8N2Q7 840 aa14.57□□□□□ -0.08
IFT43-206ENST00000554026 ARHGEF1Q92888 912 aaKnown RBP14.57□□□□□ -0.08
IFT43-206ENST00000554026 COL15A1P39059 1388 aa14.57□□□□□ -0.08
IFT43-206ENST00000554026 SENP3-EIF4A1A0A087X0R7 540 aa14.56□□□□□ -0.08
IFT43-206ENST00000554026 A1BGP04217 495 aa14.56□□□□□ -0.08
IFT43-206ENST00000554026 POLD1P28340 1107 aa14.56□□□□□ -0.08
IFT43-206ENST00000554026 PTGER2P43116 358 aa14.56□□□□□ -0.08
IFT43-206ENST00000554026 DUSP27Q5VZP5 1158 aa14.56□□□□□ -0.08
IFT43-206ENST00000554026 PRAMEF22A3QJZ6 481 aa14.55□□□□□ -0.08
IFT43-206ENST00000554026 EIF2S2P20042 333 aaKnown RBP14.55□□□□□ -0.08
IFT43-206ENST00000554026 HNRNPUQ00839 825 aaKnown RBP eCLIP14.55□□□□□ -0.08
IFT43-206ENST00000554026 HDGFL1Q5TGJ6 251 aa14.55□□□□□ -0.08
IFT43-206ENST00000554026 NARFQ9UHQ1 456 aa14.55□□□□□ -0.08
IFT43-206ENST00000554026 FANCIQ9NVI1 1328 aa14.55□□□□□ -0.08
IFT43-206ENST00000554026 CCDC30Q5VVM6 783 aa14.54□□□□□ -0.08
IFT43-206ENST00000554026 TSR2Q969E8 191 aaKnown RBP14.54□□□□□ -0.08
IFT43-206ENST00000554026 DBF4Q9UBU7 674 aaPredicted RBP14.54□□□□□ -0.08
IFT43-206ENST00000554026 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
IFT43-206ENST00000554026 USP42Q9H9J4 1324 aaKnown RBP14.54□□□□□ -0.08
IFT43-206ENST00000554026 COL24A1Q17RW2 1714 aa14.53□□□□□ -0.08
IFT43-206ENST00000554026 TWISTNBQ3B726 338 aaPredicted RBP14.53□□□□□ -0.08
IFT43-206ENST00000554026 AMIGO3Q86WK7 504 aa14.53□□□□□ -0.08
IFT43-206ENST00000554026 DDX21Q9NR30 783 aaKnown RBP eCLIP14.53□□□□□ -0.08
IFT43-206ENST00000554026 HYPKQ9NX55 129 aa14.53□□□□□ -0.08
IFT43-206ENST00000554026 ZNF652Q9Y2D9 606 aa14.53□□□□□ -0.08
IFT43-206ENST00000554026 ZNF330Q9Y3S2 320 aaPredicted RBP14.53□□□□□ -0.08
IFT43-206ENST00000554026 C4AP0C0L4 1744 aa14.52□□□□□ -0.08
IFT43-206ENST00000554026 NBPF26B4DH59 902 aa14.52□□□□□ -0.09
IFT43-206ENST00000554026 SLFN5Q08AF3 891 aa14.52□□□□□ -0.09
IFT43-206ENST00000554026 NBPF10Q6P3W6 841 aaKnown RBP14.52□□□□□ -0.09
IFT43-206ENST00000554026 CLEC4GQ6UXB4 293 aa14.52□□□□□ -0.09
IFT43-206ENST00000554026 KIF6Q6ZMV9 814 aa14.52□□□□□ -0.09
IFT43-206ENST00000554026 DZIP3Q86Y13 1208 aaKnown RBP14.52□□□□□ -0.09
IFT43-206ENST00000554026 NBPF15Q8N660 670 aa14.52□□□□□ -0.09
IFT43-206ENST00000554026 C8orf58Q8NAV2 365 aa14.52□□□□□ -0.09
IFT43-206ENST00000554026 STK31Q9BXU1 1019 aa14.52□□□□□ -0.09
IFT43-206ENST00000554026 FHDC1Q9C0D6 1143 aaPredicted RBP14.52□□□□□ -0.09
IFT43-206ENST00000554026 GYS1P13807 737 aa14.51□□□□□ -0.09
IFT43-206ENST00000554026 MYL6BP14649 208 aa14.51□□□□□ -0.09
IFT43-206ENST00000554026 KRT24Q2M2I5 525 aa14.51□□□□□ -0.09
IFT43-206ENST00000554026 ZNF428Q96B54 188 aa14.51□□□□□ -0.09
IFT43-206ENST00000554026 ARXQ96QS3 562 aa14.51□□□□□ -0.09
IFT43-206ENST00000554026 ZBED9Q6R2W3 1325 aa14.5□□□□□ -0.09
IFT43-206ENST00000554026 ERVV-1B6SEH8 477 aa14.5□□□□□ -0.09
IFT43-206ENST00000554026 ELL2O00472 640 aaPredicted RBP14.5□□□□□ -0.09
IFT43-206ENST00000554026 CT47B1P0C2W7 299 aaPredicted RBP14.5□□□□□ -0.09
IFT43-206ENST00000554026 USPL1Q5W0Q7 1092 aa14.5□□□□□ -0.09
IFT43-206ENST00000554026 GOLGB1Q14789 3259 aaKnown RBP14.49□□□□□ -0.09
IFT43-206ENST00000554026 EXOSC9Q06265 439 aaKnown RBP14.49□□□□□ -0.09
IFT43-206ENST00000554026 PDIA6Q15084 440 aa14.49□□□□□ -0.09
IFT43-206ENST00000554026 SMIM5Q71RC9 77 aa14.49□□□□□ -0.09
IFT43-206ENST00000554026 SGIP1Q9BQI5 828 aa14.49□□□□□ -0.09
IFT43-206ENST00000554026 SYT17Q9BSW7 474 aa14.49□□□□□ -0.09
IFT43-206ENST00000554026 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
IFT43-206ENST00000554026 CHPF2Q9P2E5 772 aa14.49□□□□□ -0.09
IFT43-206ENST00000554026 TBC1D2BQ9UPU7 963 aa14.49□□□□□ -0.09
IFT43-206ENST00000554026 PIP4K2AP48426 406 aaPredicted RBP14.48□□□□□ -0.09
IFT43-206ENST00000554026 TRMT2AQ8IZ69 625 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms