RNA–Protein interactions for RNA: ENST00000553898.1

PCNX4-207, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-207ENST00000553898 TJP1Q07157 1748 aa12.79□□□□□ -0.36
PCNX4-207ENST00000553898 POLD1P28340 1107 aa12.79□□□□□ -0.36
PCNX4-207ENST00000553898 SLC16A10Q8TF71 515 aa12.79□□□□□ -0.36
PCNX4-207ENST00000553898 CFAP44Q96MT7 982 aa12.79□□□□□ -0.36
PCNX4-207ENST00000553898 IFT57Q9NWB7 429 aa12.79□□□□□ -0.36
PCNX4-207ENST00000553898 PNPLA7Q6ZV29 1317 aa12.79□□□□□ -0.36
PCNX4-207ENST00000553898 COL5A3P25940 1745 aaPredicted RBP12.79□□□□□ -0.36
PCNX4-207ENST00000553898 KDM3BQ7LBC6 1761 aa12.79□□□□□ -0.36
PCNX4-207ENST00000553898 ZPR1O75312 459 aa12.78□□□□□ -0.36
PCNX4-207ENST00000553898 RPS6KA4O75676 772 aa12.78□□□□□ -0.36
PCNX4-207ENST00000553898 CYP19A1P11511 503 aaPredicted RBP12.78□□□□□ -0.36
PCNX4-207ENST00000553898 CCDC27Q2M243 656 aa12.78□□□□□ -0.36
PCNX4-207ENST00000553898 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
PCNX4-207ENST00000553898 WWC1Q8IX03 1113 aa12.78□□□□□ -0.36
PCNX4-207ENST00000553898 MTFR1LQ9H019 292 aa12.78□□□□□ -0.36
PCNX4-207ENST00000553898 ATF5Q9Y2D1 282 aaPredicted RBP12.78□□□□□ -0.36
PCNX4-207ENST00000553898 A0A087WZG4 1122 aa12.77□□□□□ -0.37
PCNX4-207ENST00000553898 EIF4A1P60842 406 aaKnown RBP12.77□□□□□ -0.37
PCNX4-207ENST00000553898 COL23A1Q86Y22 540 aaPredicted RBP12.77□□□□□ -0.37
PCNX4-207ENST00000553898 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.37
PCNX4-207ENST00000553898 CHL1O00533 1208 aa12.76□□□□□ -0.37
PCNX4-207ENST00000553898 EIF2S2P20042 333 aaKnown RBP12.76□□□□□ -0.37
PCNX4-207ENST00000553898 NCBP3Q53F19 620 aaKnown RBP12.76□□□□□ -0.37
PCNX4-207ENST00000553898 CHMP4AQ9BY43 222 aa12.76□□□□□ -0.37
PCNX4-207ENST00000553898 MBIPQ9NS73 344 aa12.76□□□□□ -0.37
PCNX4-207ENST00000553898 ZBTB1Q9Y2K1 713 aa12.76□□□□□ -0.37
PCNX4-207ENST00000553898 UBR3Q6ZT12 1888 aa12.76□□□□□ -0.37
PCNX4-207ENST00000553898 GIGYF1O75420 1035 aaPredicted RBP12.75□□□□□ -0.37
PCNX4-207ENST00000553898 A1BGP04217 495 aa12.75□□□□□ -0.37
PCNX4-207ENST00000553898 COL15A1P39059 1388 aa12.75□□□□□ -0.37
PCNX4-207ENST00000553898 MSL1Q68DK7 614 aa12.75□□□□□ -0.37
PCNX4-207ENST00000553898 WDR63Q8IWG1 891 aa12.75□□□□□ -0.37
PCNX4-207ENST00000553898 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
PCNX4-207ENST00000553898 PDGFDQ9GZP0 370 aaPredicted RBP12.75□□□□□ -0.37
PCNX4-207ENST00000553898 MYH16Q9H6N6 1097 aa12.75□□□□□ -0.37
PCNX4-207ENST00000553898 USP16Q9Y5T5 823 aa12.75□□□□□ -0.37
PCNX4-207ENST00000553898 LAMB4A4D0S4 1761 aa12.74□□□□□ -0.37
PCNX4-207ENST00000553898 COL24A1Q17RW2 1714 aa12.74□□□□□ -0.37
PCNX4-207ENST00000553898 IL16Q14005 1332 aa12.74□□□□□ -0.37
PCNX4-207ENST00000553898 PRAMEF22A3QJZ6 481 aa12.74□□□□□ -0.37
PCNX4-207ENST00000553898 INTS5Q6P9B9 1019 aaKnown RBP12.74□□□□□ -0.37
PCNX4-207ENST00000553898 SMIM5Q71RC9 77 aa12.74□□□□□ -0.37
PCNX4-207ENST00000553898 NECTIN2Q92692 538 aa12.74□□□□□ -0.37
PCNX4-207ENST00000553898 ARHGEF1Q92888 912 aaKnown RBP12.74□□□□□ -0.37
PCNX4-207ENST00000553898 SOS1Q07889 1333 aaPredicted RBP12.73□□□□□ -0.37
PCNX4-207ENST00000553898 NPHP1O15259 732 aa12.73□□□□□ -0.37
PCNX4-207ENST00000553898 MYL6BP14649 208 aa12.73□□□□□ -0.37
PCNX4-207ENST00000553898 IL6STP40189 918 aaPredicted RBP12.73□□□□□ -0.37
PCNX4-207ENST00000553898 GOLGA2Q08379 1002 aa12.73□□□□□ -0.37
PCNX4-207ENST00000553898 HDGFL1Q5TGJ6 251 aa12.73□□□□□ -0.37
PCNX4-207ENST00000553898 TSR2Q969E8 191 aaKnown RBP12.73□□□□□ -0.37
PCNX4-207ENST00000553898 ELL2O00472 640 aaPredicted RBP12.72□□□□□ -0.37
PCNX4-207ENST00000553898 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
PCNX4-207ENST00000553898 HNRNPUQ00839 825 aaKnown RBP eCLIP12.72□□□□□ -0.37
PCNX4-207ENST00000553898 DUSP27Q5VZP5 1158 aa12.72□□□□□ -0.37
PCNX4-207ENST00000553898 KIF6Q6ZMV9 814 aa12.72□□□□□ -0.37
PCNX4-207ENST00000553898 NLGN1Q8N2Q7 840 aa12.72□□□□□ -0.37
PCNX4-207ENST00000553898 ERBB4Q15303 1308 aa12.71□□□□□ -0.37
PCNX4-207ENST00000553898 MYH14Q7Z406 1995 aaKnown RBP12.71□□□□□ -0.37
PCNX4-207ENST00000553898 HOXB7P09629 217 aa12.71□□□□□ -0.37
PCNX4-207ENST00000553898 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.37
PCNX4-207ENST00000553898 ZNF652Q9Y2D9 606 aa12.71□□□□□ -0.37
PCNX4-207ENST00000553898 USP42Q9H9J4 1324 aaKnown RBP12.7□□□□□ -0.38
PCNX4-207ENST00000553898 ZNF853P0CG23 659 aa12.7□□□□□ -0.38
PCNX4-207ENST00000553898 KRT24Q2M2I5 525 aa12.7□□□□□ -0.38
PCNX4-207ENST00000553898 USPL1Q5W0Q7 1092 aa12.7□□□□□ -0.38
PCNX4-207ENST00000553898 AMIGO3Q86WK7 504 aa12.7□□□□□ -0.38
PCNX4-207ENST00000553898 STK31Q9BXU1 1019 aa12.7□□□□□ -0.38
PCNX4-207ENST00000553898 SRP68Q9UHB9 627 aaKnown RBP12.7□□□□□ -0.38
PCNX4-207ENST00000553898 NARFQ9UHQ1 456 aa12.7□□□□□ -0.38
PCNX4-207ENST00000553898 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
PCNX4-207ENST00000553898 PARP3Q9Y6F1 533 aa12.7□□□□□ -0.38
PCNX4-207ENST00000553898 C4AP0C0L4 1744 aa12.7□□□□□ -0.38
PCNX4-207ENST00000553898 FANCIQ9NVI1 1328 aa12.69□□□□□ -0.38
PCNX4-207ENST00000553898 E9PSI1 815 aa12.69□□□□□ -0.38
PCNX4-207ENST00000553898 EIF5P55010 431 aaKnown RBP12.69□□□□□ -0.38
PCNX4-207ENST00000553898 CCDC30Q5VVM6 783 aa12.69□□□□□ -0.38
PCNX4-207ENST00000553898 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
PCNX4-207ENST00000553898 MMP10P09238 476 aa12.68□□□□□ -0.38
PCNX4-207ENST00000553898 AIMP1Q12904 312 aaKnown RBP12.68□□□□□ -0.38
PCNX4-207ENST00000553898 TWISTNBQ3B726 338 aaPredicted RBP12.68□□□□□ -0.38
PCNX4-207ENST00000553898 BICDL1Q6ZP65 573 aa12.68□□□□□ -0.38
PCNX4-207ENST00000553898 DBF4Q9UBU7 674 aaPredicted RBP12.68□□□□□ -0.38
PCNX4-207ENST00000553898 GYS1P13807 737 aa12.67□□□□□ -0.38
PCNX4-207ENST00000553898 PTGER2P43116 358 aa12.67□□□□□ -0.38
PCNX4-207ENST00000553898 CHPF2Q9P2E5 772 aa12.67□□□□□ -0.38
PCNX4-207ENST00000553898 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
PCNX4-207ENST00000553898 EXOSC9Q06265 439 aaKnown RBP12.66□□□□□ -0.38
PCNX4-207ENST00000553898 FKBP8Q14318 412 aa12.66□□□□□ -0.38
PCNX4-207ENST00000553898 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
PCNX4-207ENST00000553898 NBPF15Q8N660 670 aa12.66□□□□□ -0.38
PCNX4-207ENST00000553898 C8orf58Q8NAV2 365 aa12.66□□□□□ -0.38
PCNX4-207ENST00000553898 SETDB2Q96T68 719 aa12.66□□□□□ -0.38
PCNX4-207ENST00000553898 DDX21Q9NR30 783 aaKnown RBP eCLIP12.66□□□□□ -0.38
PCNX4-207ENST00000553898 HYPKQ9NX55 129 aa12.66□□□□□ -0.38
PCNX4-207ENST00000553898 ANXA1P04083 346 aa12.65□□□□□ -0.38
PCNX4-207ENST00000553898 SGIP1Q9BQI5 828 aa12.65□□□□□ -0.38
PCNX4-207ENST00000553898 ZBTB3Q9H5J0 574 aa12.65□□□□□ -0.38
PCNX4-207ENST00000553898 SCN7AQ01118 1682 aa12.64□□□□□ -0.39
PCNX4-207ENST00000553898 DDX58O95786 925 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms