RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 TMPOP42166 694 aaKnown RBP16.68■□□□□ 0.26
CHGA-203ENST00000553866 TAF7Q15545 349 aaPredicted RBP16.68■□□□□ 0.26
CHGA-203ENST00000553866 FMNL2Q96PY5 1086 aa16.68■□□□□ 0.26
CHGA-203ENST00000553866 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
CHGA-203ENST00000553866 USP42Q9H9J4 1324 aaKnown RBP16.68■□□□□ 0.26
CHGA-203ENST00000553866 CANXP27824 592 aaKnown RBP16.67■□□□□ 0.26
CHGA-203ENST00000553866 RIPK4P57078 832 aa16.67■□□□□ 0.26
CHGA-203ENST00000553866 WDR43Q15061 677 aaKnown RBP eCLIP16.67■□□□□ 0.26
CHGA-203ENST00000553866 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
CHGA-203ENST00000553866 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
CHGA-203ENST00000553866 FKBP8Q14318 412 aa16.66■□□□□ 0.26
CHGA-203ENST00000553866 COL15A1P39059 1388 aa16.65■□□□□ 0.26
CHGA-203ENST00000553866 A1BGP04217 495 aa16.65■□□□□ 0.26
CHGA-203ENST00000553866 PIP4K2AP48426 406 aaPredicted RBP16.65■□□□□ 0.26
CHGA-203ENST00000553866 NEUROD2Q15784 382 aa16.65■□□□□ 0.26
CHGA-203ENST00000553866 USPL1Q5W0Q7 1092 aa16.65■□□□□ 0.26
CHGA-203ENST00000553866 RUNDC1Q96C34 613 aa16.65■□□□□ 0.26
CHGA-203ENST00000553866 STARD3NLO95772 234 aa16.64■□□□□ 0.25
CHGA-203ENST00000553866 EIF5P55010 431 aaKnown RBP16.64■□□□□ 0.25
CHGA-203ENST00000553866 NLGN1Q8N2Q7 840 aa16.64■□□□□ 0.25
CHGA-203ENST00000553866 BCL2L12Q9HB09 334 aa16.64■□□□□ 0.25
CHGA-203ENST00000553866 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
CHGA-203ENST00000553866 GOLGB1Q14789 3259 aaKnown RBP16.64■□□□□ 0.25
CHGA-203ENST00000553866 DDR1Q08345 913 aa16.63■□□□□ 0.25
CHGA-203ENST00000553866 TEX13AQ9BXU3 409 aaPredicted RBP16.63■□□□□ 0.25
CHGA-203ENST00000553866 NARFQ9UHQ1 456 aa16.62■□□□□ 0.25
CHGA-203ENST00000553866 CD2APQ9Y5K6 639 aa16.62■□□□□ 0.25
CHGA-203ENST00000553866 SNRPA1P09661 255 aaKnown RBP16.61■□□□□ 0.25
CHGA-203ENST00000553866 EIF4A1P60842 406 aaKnown RBP16.61■□□□□ 0.25
CHGA-203ENST00000553866 KIAA1551Q9HCM1 1747 aa16.61■□□□□ 0.25
CHGA-203ENST00000553866 UTRNP46939 3433 aa16.6■□□□□ 0.25
CHGA-203ENST00000553866 SENP3-EIF4A1A0A087X0R7 540 aa16.6■□□□□ 0.25
CHGA-203ENST00000553866 NBPF26B4DH59 902 aa16.6■□□□□ 0.25
CHGA-203ENST00000553866 ZPR1O75312 459 aa16.6■□□□□ 0.25
CHGA-203ENST00000553866 TM4SF1P30408 202 aa16.6■□□□□ 0.25
CHGA-203ENST00000553866 NBPF10Q6P3W6 841 aaKnown RBP16.6■□□□□ 0.25
CHGA-203ENST00000553866 NBPF15Q8N660 670 aa16.6■□□□□ 0.25
CHGA-203ENST00000553866 WWC3Q9ULE0 1092 aa16.6■□□□□ 0.25
CHGA-203ENST00000553866 TBC1D2BQ9UPU7 963 aa16.6■□□□□ 0.25
CHGA-203ENST00000553866 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
CHGA-203ENST00000553866 KIF13BQ9NQT8 1826 aa16.6■□□□□ 0.25
CHGA-203ENST00000553866 ANP32CO43423 234 aa16.59■□□□□ 0.25
CHGA-203ENST00000553866 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
CHGA-203ENST00000553866 YBX3P16989 372 aaKnown RBP eCLIP16.59■□□□□ 0.25
CHGA-203ENST00000553866 IL6STP40189 918 aaPredicted RBP16.59■□□□□ 0.25
CHGA-203ENST00000553866 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
CHGA-203ENST00000553866 PNISRQ8TF01 805 aaKnown RBP16.59■□□□□ 0.25
CHGA-203ENST00000553866 LAMB4A4D0S4 1761 aa16.59■□□□□ 0.25
CHGA-203ENST00000553866 POLRMTO00411 1230 aaKnown RBP16.58■□□□□ 0.24
CHGA-203ENST00000553866 APAF1O14727 1248 aa16.58■□□□□ 0.24
CHGA-203ENST00000553866 NFIXQ14938 502 aa16.58■□□□□ 0.24
CHGA-203ENST00000553866 GPR162Q16538 588 aa16.58■□□□□ 0.24
CHGA-203ENST00000553866 PARP3Q9Y6F1 533 aa16.58■□□□□ 0.24
CHGA-203ENST00000553866 C10orf71Q711Q0 1435 aa16.58■□□□□ 0.24
CHGA-203ENST00000553866 SCN7AQ01118 1682 aa16.58■□□□□ 0.24
CHGA-203ENST00000553866 N4BP2Q86UW6 1770 aaPredicted RBP16.58■□□□□ 0.24
CHGA-203ENST00000553866 AFDNP55196 1824 aaKnown RBP16.57■□□□□ 0.24
CHGA-203ENST00000553866 LMOD3Q0VAK6 560 aa16.57■□□□□ 0.24
CHGA-203ENST00000553866 TSPYL4Q9UJ04 414 aa16.57■□□□□ 0.24
CHGA-203ENST00000553866 PXDNLA1KZ92 1463 aa16.56■□□□□ 0.24
CHGA-203ENST00000553866 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
CHGA-203ENST00000553866 CAMTA2O94983 1202 aa16.56■□□□□ 0.24
CHGA-203ENST00000553866 A0A087WZG4 1122 aa16.55■□□□□ 0.24
CHGA-203ENST00000553866 A0A0G2JLW4 131 aa16.55■□□□□ 0.24
CHGA-203ENST00000553866 KRT24Q2M2I5 525 aa16.55■□□□□ 0.24
CHGA-203ENST00000553866 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
CHGA-203ENST00000553866 BICDL1Q6ZP65 573 aa16.55■□□□□ 0.24
CHGA-203ENST00000553866 MRS2Q9HD23 443 aa16.55■□□□□ 0.24
CHGA-203ENST00000553866 BCORQ6W2J9 1755 aa16.55■□□□□ 0.24
CHGA-203ENST00000553866 NRXN2Q9P2S2 1712 aa16.54■□□□□ 0.24
CHGA-203ENST00000553866 CHL1O00533 1208 aa16.54■□□□□ 0.24
CHGA-203ENST00000553866 DZIP3Q86Y13 1208 aaKnown RBP16.54■□□□□ 0.24
CHGA-203ENST00000553866 LAS1LQ9Y4W2 734 aaKnown RBP16.54■□□□□ 0.24
CHGA-203ENST00000553866 KCNA3P22001 575 aa16.53■□□□□ 0.24
CHGA-203ENST00000553866 SERPINB2P05120 415 aa16.52■□□□□ 0.24
CHGA-203ENST00000553866 DPEP1P16444 411 aa16.52■□□□□ 0.24
CHGA-203ENST00000553866 NGEFQ8N5V2 710 aa16.52■□□□□ 0.24
CHGA-203ENST00000553866 BABAM1Q9NWV8 329 aa16.52■□□□□ 0.24
CHGA-203ENST00000553866 CARMIL3Q8ND23 1372 aa16.51■□□□□ 0.23
CHGA-203ENST00000553866 YY1P25490 414 aa16.51■□□□□ 0.23
CHGA-203ENST00000553866 TGFB2P61812 414 aa16.51■□□□□ 0.23
CHGA-203ENST00000553866 BRCA1P38398 1863 aaKnown RBP16.5■□□□□ 0.23
CHGA-203ENST00000553866 MYL6BP14649 208 aa16.5■□□□□ 0.23
CHGA-203ENST00000553866 EIF2S2P20042 333 aaKnown RBP16.5■□□□□ 0.23
CHGA-203ENST00000553866 PDIA6Q15084 440 aa16.5■□□□□ 0.23
CHGA-203ENST00000553866 HLFQ16534 295 aa16.5■□□□□ 0.23
CHGA-203ENST00000553866 CCDC24Q8N4L8 307 aa16.5■□□□□ 0.23
CHGA-203ENST00000553866 CHD4Q14839 1912 aa16.5■□□□□ 0.23
CHGA-203ENST00000553866 ANXA1P04083 346 aa16.49■□□□□ 0.23
CHGA-203ENST00000553866 ZNF853P0CG23 659 aa16.49■□□□□ 0.23
CHGA-203ENST00000553866 CHRNA5P30532 468 aa16.49■□□□□ 0.23
CHGA-203ENST00000553866 PROSER3Q2NL68 480 aa16.49■□□□□ 0.23
CHGA-203ENST00000553866 TTLL7Q6ZT98 887 aa16.49■□□□□ 0.23
CHGA-203ENST00000553866 LRP10Q7Z4F1 713 aa16.49■□□□□ 0.23
CHGA-203ENST00000553866 NECTIN2Q92692 538 aa16.49■□□□□ 0.23
CHGA-203ENST00000553866 MBIPQ9NS73 344 aa16.49■□□□□ 0.23
CHGA-203ENST00000553866 ANKRD31Q8N7Z5 1873 aa16.48■□□□□ 0.23
CHGA-203ENST00000553866 NPM2Q86SE8 214 aaKnown RBP16.48■□□□□ 0.23
CHGA-203ENST00000553866 CFAP44Q96MT7 982 aa16.48■□□□□ 0.23
CHGA-203ENST00000553866 PRR5LQ6MZQ0 368 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms