RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 VSIG8P0DPA2 414 aa13.25□□□□□ -0.29
PCNX1-205ENST00000553508 NANOS1Q8WY41 292 aaKnown RBP13.25□□□□□ -0.29
PCNX1-205ENST00000553508 TSPAN10Q9H1Z9 355 aaPredicted RBP13.25□□□□□ -0.29
PCNX1-205ENST00000553508 RUBCNLQ9H714 662 aa13.25□□□□□ -0.29
PCNX1-205ENST00000553508 FOXK2Q01167 660 aa13.23□□□□□ -0.29
PCNX1-205ENST00000553508 TRIM22Q8IYM9 498 aa13.23□□□□□ -0.29
PCNX1-205ENST00000553508 ZNF837Q96EG3 531 aaPredicted RBP13.23□□□□□ -0.29
PCNX1-205ENST00000553508 ZNF232Q9UNY5 417 aa13.23□□□□□ -0.29
PCNX1-205ENST00000553508 H7C1W4 665 aa13.22□□□□□ -0.29
PCNX1-205ENST00000553508 M0R2N6 131 aa13.22□□□□□ -0.29
PCNX1-205ENST00000553508 GPR25O00155 361 aa13.22□□□□□ -0.29
PCNX1-205ENST00000553508 ZNF295-AS1Q8N0V1 137 aa13.22□□□□□ -0.29
PCNX1-205ENST00000553508 FAM200AQ8TCP9 573 aa13.22□□□□□ -0.29
PCNX1-205ENST00000553508 NUCKS1Q9H1E3 243 aaKnown RBP13.22□□□□□ -0.29
PCNX1-205ENST00000553508 CSB-PGBD3P0DP91 1061 aa13.21□□□□□ -0.29
PCNX1-205ENST00000553508 PGBD3Q8N328 593 aa13.21□□□□□ -0.29
PCNX1-205ENST00000553508 ZDHHC1Q8WTX9 485 aa13.21□□□□□ -0.29
PCNX1-205ENST00000553508 L3MBTL2Q969R5 705 aa13.21□□□□□ -0.29
PCNX1-205ENST00000553508 GTPBP3Q969Y2 492 aaKnown RBP13.21□□□□□ -0.29
PCNX1-205ENST00000553508 ARXQ96QS3 562 aa13.21□□□□□ -0.29
PCNX1-205ENST00000553508 NOVA2Q9UNW9 492 aaKnown RBP13.21□□□□□ -0.29
PCNX1-205ENST00000553508 NOS2P35228 1153 aa13.2□□□□□ -0.3
PCNX1-205ENST00000553508 SH3PXD2AQ5TCZ1 1133 aa13.2□□□□□ -0.3
PCNX1-205ENST00000553508 GAS2L2Q8NHY3 880 aa13.2□□□□□ -0.3
PCNX1-205ENST00000553508 CHMP7Q8WUX9 453 aaPredicted RBP13.2□□□□□ -0.3
PCNX1-205ENST00000553508 COL25A1Q9BXS0 654 aaPredicted RBP13.2□□□□□ -0.3
PCNX1-205ENST00000553508 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
PCNX1-205ENST00000553508 NBPF1Q3BBV0 1214 aa13.19□□□□□ -0.3
PCNX1-205ENST00000553508 SCG3Q8WXD2 468 aaKnown RBP13.19□□□□□ -0.3
PCNX1-205ENST00000553508 PPP1R12BO60237 982 aaPredicted RBP13.18□□□□□ -0.3
PCNX1-205ENST00000553508 TXLNAP40222 546 aa13.18□□□□□ -0.3
PCNX1-205ENST00000553508 ARSJQ5FYB0 599 aaPredicted RBP13.18□□□□□ -0.3
PCNX1-205ENST00000553508 CNTNAP3BQ96NU0 1288 aa13.18□□□□□ -0.3
PCNX1-205ENST00000553508 CNTNAP3Q9BZ76 1288 aa13.18□□□□□ -0.3
PCNX1-205ENST00000553508 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
PCNX1-205ENST00000553508 SERTM1A2A2V5 107 aa13.17□□□□□ -0.3
PCNX1-205ENST00000553508 WIPF1O43516 503 aa13.17□□□□□ -0.3
PCNX1-205ENST00000553508 TEAD4Q15561 434 aa13.17□□□□□ -0.3
PCNX1-205ENST00000553508 PBXIP1Q96AQ6 731 aa13.17□□□□□ -0.3
PCNX1-205ENST00000553508 GMCL1Q96IK5 515 aa13.17□□□□□ -0.3
PCNX1-205ENST00000553508 ARID3AQ99856 593 aa13.17□□□□□ -0.3
PCNX1-205ENST00000553508 CHMP3Q9Y3E7 222 aa13.17□□□□□ -0.3
PCNX1-205ENST00000553508 THBS1P07996 1170 aa13.16□□□□□ -0.3
PCNX1-205ENST00000553508 TATP17735 454 aaPredicted RBP13.16□□□□□ -0.3
PCNX1-205ENST00000553508 ATP4AP20648 1035 aa13.16□□□□□ -0.3
PCNX1-205ENST00000553508 FOXR1Q6PIV2 292 aa13.16□□□□□ -0.3
PCNX1-205ENST00000553508 HCN4Q9Y3Q4 1203 aa13.16□□□□□ -0.3
PCNX1-205ENST00000553508 PSMA6P60900 246 aaKnown RBP13.15□□□□□ -0.3
PCNX1-205ENST00000553508 KRT76Q01546 638 aa13.15□□□□□ -0.3
PCNX1-205ENST00000553508 RNFT1Q5M7Z0 435 aa13.15□□□□□ -0.3
PCNX1-205ENST00000553508 BICDL1Q6ZP65 573 aa13.15□□□□□ -0.3
PCNX1-205ENST00000553508 ZMIZ1Q9ULJ6 1067 aa13.15□□□□□ -0.3
PCNX1-205ENST00000553508 C21orf2O43822 256 aa13.14□□□□□ -0.31
PCNX1-205ENST00000553508 EFHC2Q5JST6 749 aa13.14□□□□□ -0.31
PCNX1-205ENST00000553508 C1orf216Q8TAB5 229 aa13.13□□□□□ -0.31
PCNX1-205ENST00000553508 STK32AQ8WU08 396 aa13.13□□□□□ -0.31
PCNX1-205ENST00000553508 ZDHHC3Q9NYG2 299 aa13.13□□□□□ -0.31
PCNX1-205ENST00000553508 A0A1W2PNR3 127 aa13.12□□□□□ -0.31
PCNX1-205ENST00000553508 EML1O00423 815 aa13.12□□□□□ -0.31
PCNX1-205ENST00000553508 ATG7O95352 703 aa13.12□□□□□ -0.31
PCNX1-205ENST00000553508 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
PCNX1-205ENST00000553508 CRISPLD1Q9H336 500 aa13.12□□□□□ -0.31
PCNX1-205ENST00000553508 ZIC5Q96T25 663 aa13.11□□□□□ -0.31
PCNX1-205ENST00000553508 GJA3Q9Y6H8 435 aa13.11□□□□□ -0.31
PCNX1-205ENST00000553508 GAS6Q14393 721 aa13.1□□□□□ -0.31
PCNX1-205ENST00000553508 NGLY1Q96IV0 654 aa13.1□□□□□ -0.31
PCNX1-205ENST00000553508 ELOAQ14241 798 aaKnown RBP13.09□□□□□ -0.31
PCNX1-205ENST00000553508 PHACTR1Q9C0D0 580 aa13.09□□□□□ -0.31
PCNX1-205ENST00000553508 INSM1Q01101 510 aaPredicted RBP13.08□□□□□ -0.32
PCNX1-205ENST00000553508 RHPN1Q8TCX5 695 aa13.08□□□□□ -0.32
PCNX1-205ENST00000553508 PRIMPOLQ96LW4 560 aa13.08□□□□□ -0.32
PCNX1-205ENST00000553508 C2orf49Q9BVC5 232 aaPredicted RBP13.08□□□□□ -0.32
PCNX1-205ENST00000553508 ZCCHC2Q9C0B9 1178 aaKnown RBP13.08□□□□□ -0.32
PCNX1-205ENST00000553508 IGFBP4P22692 258 aa13.07□□□□□ -0.32
PCNX1-205ENST00000553508 UBAP2LQ14157 1087 aaKnown RBP13.07□□□□□ -0.32
PCNX1-205ENST00000553508 LBRQ14739 615 aaKnown RBP13.07□□□□□ -0.32
PCNX1-205ENST00000553508 TMEM164Q5U3C3 297 aa13.07□□□□□ -0.32
PCNX1-205ENST00000553508 NEUROD4Q9HD90 331 aa13.07□□□□□ -0.32
PCNX1-205ENST00000553508 ACIN1Q9UKV3 1341 aaKnown RBP13.07□□□□□ -0.32
PCNX1-205ENST00000553508 PRMT3O60678 531 aa13.06□□□□□ -0.32
PCNX1-205ENST00000553508 LRRC69Q6ZNQ3 347 aa13.06□□□□□ -0.32
PCNX1-205ENST00000553508 KLRG1Q96E93 195 aa13.06□□□□□ -0.32
PCNX1-205ENST00000553508 ABHD17AQ96GS6 310 aa13.06□□□□□ -0.32
PCNX1-205ENST00000553508 NLRP8Q86W28 1048 aa13.05□□□□□ -0.32
PCNX1-205ENST00000553508 ALDH16A1Q8IZ83 802 aa13.05□□□□□ -0.32
PCNX1-205ENST00000553508 BNIP3LO60238 219 aa13.04□□□□□ -0.32
PCNX1-205ENST00000553508 WEE1P30291 646 aa13.04□□□□□ -0.32
PCNX1-205ENST00000553508 FIGNL1Q6PIW4 674 aa13.04□□□□□ -0.32
PCNX1-205ENST00000553508 PHF24Q9UPV7 400 aa13.04□□□□□ -0.32
PCNX1-205ENST00000553508 ATXN7O15265 892 aaPredicted RBP13.03□□□□□ -0.32
PCNX1-205ENST00000553508 MX2P20592 715 aa13.03□□□□□ -0.32
PCNX1-205ENST00000553508 FAM69CQ0P6D2 419 aa13.03□□□□□ -0.32
PCNX1-205ENST00000553508 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
PCNX1-205ENST00000553508 ZSCAN1Q8NBB4 408 aa13.03□□□□□ -0.32
PCNX1-205ENST00000553508 CFHR5Q9BXR6 569 aa13.03□□□□□ -0.32
PCNX1-205ENST00000553508 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
PCNX1-205ENST00000553508 PCDHGC4Q9Y5F7 938 aa13.03□□□□□ -0.32
PCNX1-205ENST00000553508 DCDC2BA2VCK2 349 aa13.02□□□□□ -0.33
PCNX1-205ENST00000553508 HIRAP54198 1017 aaPredicted RBP13.02□□□□□ -0.33
PCNX1-205ENST00000553508 SWI5Q1ZZU3 235 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms