RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 E9PSI1 815 aa19.31■□□□□ 0.68
MTHFD1-204ENST00000553405 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
MTHFD1-204ENST00000553405 QSER1Q2KHR3 1735 aa19.31■□□□□ 0.68
MTHFD1-204ENST00000553405 RC3H1Q5TC82 1133 aaKnown RBP19.3■□□□□ 0.68
MTHFD1-204ENST00000553405 TSPYL6Q8N831 410 aa19.3■□□□□ 0.68
MTHFD1-204ENST00000553405 HOXB7P09629 217 aa19.29■□□□□ 0.68
MTHFD1-204ENST00000553405 CRKLP46109 303 aaKnown RBP19.29■□□□□ 0.68
MTHFD1-204ENST00000553405 DUSP27Q5VZP5 1158 aa19.29■□□□□ 0.68
MTHFD1-204ENST00000553405 MYH16Q9H6N6 1097 aa19.29■□□□□ 0.68
MTHFD1-204ENST00000553405 TEX13AQ9BXU3 409 aaPredicted RBP19.28■□□□□ 0.68
MTHFD1-204ENST00000553405 NBPF26B4DH59 902 aa19.27■□□□□ 0.68
MTHFD1-204ENST00000553405 SLC15A2Q16348 729 aa19.27■□□□□ 0.68
MTHFD1-204ENST00000553405 NBPF14Q5TI25 921 aa19.27■□□□□ 0.68
MTHFD1-204ENST00000553405 NBPF10Q6P3W6 841 aaKnown RBP19.27■□□□□ 0.68
MTHFD1-204ENST00000553405 NBPF15Q8N660 670 aa19.27■□□□□ 0.68
MTHFD1-204ENST00000553405 EXOSC9Q06265 439 aaKnown RBP19.26■□□□□ 0.67
MTHFD1-204ENST00000553405 PDIA6Q15084 440 aa19.26■□□□□ 0.67
MTHFD1-204ENST00000553405 LRP10Q7Z4F1 713 aa19.26■□□□□ 0.67
MTHFD1-204ENST00000553405 CCDC87Q9NVE4 849 aa19.26■□□□□ 0.67
MTHFD1-204ENST00000553405 ZBTB1Q9Y2K1 713 aa19.26■□□□□ 0.67
MTHFD1-204ENST00000553405 SOS1Q07889 1333 aaPredicted RBP19.25■□□□□ 0.67
MTHFD1-204ENST00000553405 CASZ1Q86V15 1759 aa19.25■□□□□ 0.67
MTHFD1-204ENST00000553405 STARD3NLO95772 234 aa19.25■□□□□ 0.67
MTHFD1-204ENST00000553405 A1BGP04217 495 aa19.25■□□□□ 0.67
MTHFD1-204ENST00000553405 VAMP4O75379 141 aa19.24■□□□□ 0.67
MTHFD1-204ENST00000553405 SMIM5Q71RC9 77 aa19.24■□□□□ 0.67
MTHFD1-204ENST00000553405 C4AP0C0L4 1744 aa19.24■□□□□ 0.67
MTHFD1-204ENST00000553405 PNPLA7Q6ZV29 1317 aa19.24■□□□□ 0.67
MTHFD1-204ENST00000553405 ELL2O00472 640 aaPredicted RBP19.23■□□□□ 0.67
MTHFD1-204ENST00000553405 RPS6KA4O75676 772 aa19.23■□□□□ 0.67
MTHFD1-204ENST00000553405 EIF5P55010 431 aaKnown RBP19.23■□□□□ 0.67
MTHFD1-204ENST00000553405 ERBB4Q15303 1308 aa19.23■□□□□ 0.67
MTHFD1-204ENST00000553405 GNPATO15228 680 aa19.22■□□□□ 0.67
MTHFD1-204ENST00000553405 HMGB2P26583 209 aaKnown RBP19.22■□□□□ 0.67
MTHFD1-204ENST00000553405 PROSER3Q2NL68 480 aa19.22■□□□□ 0.67
MTHFD1-204ENST00000553405 TWISTNBQ3B726 338 aaPredicted RBP19.22■□□□□ 0.67
MTHFD1-204ENST00000553405 STK32BQ9NY57 414 aa19.22■□□□□ 0.67
MTHFD1-204ENST00000553405 PIP4K2AP48426 406 aaPredicted RBP19.21■□□□□ 0.67
MTHFD1-204ENST00000553405 AK7Q96M32 723 aa19.21■□□□□ 0.67
MTHFD1-204ENST00000553405 PDGFDQ9GZP0 370 aaPredicted RBP19.21■□□□□ 0.67
MTHFD1-204ENST00000553405 SSFA2P28290 1259 aa19.2■□□□□ 0.66
MTHFD1-204ENST00000553405 IL6STP40189 918 aaPredicted RBP19.2■□□□□ 0.66
MTHFD1-204ENST00000553405 HDGFL1Q5TGJ6 251 aa19.2■□□□□ 0.66
MTHFD1-204ENST00000553405 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.19■□□□□ 0.66
MTHFD1-204ENST00000553405 EIF2S2P20042 333 aaKnown RBP19.19■□□□□ 0.66
MTHFD1-204ENST00000553405 R3HDM1Q15032 1099 aaKnown RBP19.19■□□□□ 0.66
MTHFD1-204ENST00000553405 COL23A1Q86Y22 540 aaPredicted RBP19.19■□□□□ 0.66
MTHFD1-204ENST00000553405 TFCP2L1Q9NZI6 479 aa19.19■□□□□ 0.66
MTHFD1-204ENST00000553405 COL15A1P39059 1388 aa19.19■□□□□ 0.66
MTHFD1-204ENST00000553405 COL24A1Q17RW2 1714 aa19.18■□□□□ 0.66
MTHFD1-204ENST00000553405 ADRA2BP18089 450 aa19.18■□□□□ 0.66
MTHFD1-204ENST00000553405 CANXP27824 592 aaKnown RBP19.18■□□□□ 0.66
MTHFD1-204ENST00000553405 YTHDC1Q96MU7 727 aaKnown RBP19.18■□□□□ 0.66
MTHFD1-204ENST00000553405 CHPF2Q9P2E5 772 aa19.18■□□□□ 0.66
MTHFD1-204ENST00000553405 RTCBQ9Y3I0 505 aaKnown RBP19.18■□□□□ 0.66
MTHFD1-204ENST00000553405 ANXA1P04083 346 aa19.17■□□□□ 0.66
MTHFD1-204ENST00000553405 NECTIN2Q92692 538 aa19.17■□□□□ 0.66
MTHFD1-204ENST00000553405 ARHGEF1Q92888 912 aaKnown RBP19.17■□□□□ 0.66
MTHFD1-204ENST00000553405 DDX21Q9NR30 783 aaKnown RBP eCLIP19.17■□□□□ 0.66
MTHFD1-204ENST00000553405 SCN7AQ01118 1682 aa19.17■□□□□ 0.66
MTHFD1-204ENST00000553405 BCORQ6W2J9 1755 aa19.16■□□□□ 0.66
MTHFD1-204ENST00000553405 PSDA5PKW4 1024 aaPredicted RBP19.15■□□□□ 0.66
MTHFD1-204ENST00000553405 PHF14O94880 888 aa19.14■□□□□ 0.65
MTHFD1-204ENST00000553405 CT47B1P0C2W7 299 aaPredicted RBP19.14■□□□□ 0.65
MTHFD1-204ENST00000553405 CCDC30Q5VVM6 783 aa19.14■□□□□ 0.65
MTHFD1-204ENST00000553405 FLAD1Q8NFF5 587 aa19.14■□□□□ 0.65
MTHFD1-204ENST00000553405 BCL2L12Q9HB09 334 aa19.14■□□□□ 0.65
MTHFD1-204ENST00000553405 DBF4Q9UBU7 674 aaPredicted RBP19.14■□□□□ 0.65
MTHFD1-204ENST00000553405 CACNA1FO60840 1977 aa19.13■□□□□ 0.65
MTHFD1-204ENST00000553405 MYL6BP14649 208 aa19.13■□□□□ 0.65
MTHFD1-204ENST00000553405 TRAPPC3LQ5T215 181 aa19.13■□□□□ 0.65
MTHFD1-204ENST00000553405 TTLL7Q6ZT98 887 aa19.13■□□□□ 0.65
MTHFD1-204ENST00000553405 USP42Q9H9J4 1324 aaKnown RBP19.13■□□□□ 0.65
MTHFD1-204ENST00000553405 SRCAPQ6ZRS2 3230 aa19.12■□□□□ 0.65
MTHFD1-204ENST00000553405 TCERG1O14776 1098 aaKnown RBP19.12■□□□□ 0.65
MTHFD1-204ENST00000553405 CAMTA2O94983 1202 aa19.12■□□□□ 0.65
MTHFD1-204ENST00000553405 ZNF428Q96B54 188 aa19.12■□□□□ 0.65
MTHFD1-204ENST00000553405 SRP68Q9UHB9 627 aaKnown RBP19.12■□□□□ 0.65
MTHFD1-204ENST00000553405 NARFQ9UHQ1 456 aa19.12■□□□□ 0.65
MTHFD1-204ENST00000553405 G2E3Q7L622 706 aa19.11■□□□□ 0.65
MTHFD1-204ENST00000553405 SSH1Q8WYL5 1049 aa19.11■□□□□ 0.65
MTHFD1-204ENST00000553405 PHAXQ9H814 394 aaKnown RBP19.11■□□□□ 0.65
MTHFD1-204ENST00000553405 A0A087WZG4 1122 aa19.1■□□□□ 0.65
MTHFD1-204ENST00000553405 GYS1P13807 737 aa19.1■□□□□ 0.65
MTHFD1-204ENST00000553405 XAGE3Q8WTP9 111 aa19.1■□□□□ 0.65
MTHFD1-204ENST00000553405 CHMP4AQ9BY43 222 aa19.1■□□□□ 0.65
MTHFD1-204ENST00000553405 HYPKQ9NX55 129 aa19.1■□□□□ 0.65
MTHFD1-204ENST00000553405 TBC1D2BQ9UPU7 963 aa19.1■□□□□ 0.65
MTHFD1-204ENST00000553405 SLC4A2P04920 1241 aa19.09■□□□□ 0.65
MTHFD1-204ENST00000553405 RARSP54136 660 aaKnown RBP19.09■□□□□ 0.65
MTHFD1-204ENST00000553405 COPS6Q7L5N1 327 aa19.09■□□□□ 0.65
MTHFD1-204ENST00000553405 MRPL50Q8N5N7 158 aaKnown RBP19.09■□□□□ 0.65
MTHFD1-204ENST00000553405 RGL2O15211 777 aa19.08■□□□□ 0.64
MTHFD1-204ENST00000553405 BRPF1P55201 1214 aaPredicted RBP19.08■□□□□ 0.64
MTHFD1-204ENST00000553405 ALDH1L2Q3SY69 923 aa19.08■□□□□ 0.64
MTHFD1-204ENST00000553405 DZIP3Q86Y13 1208 aaKnown RBP19.08■□□□□ 0.64
MTHFD1-204ENST00000553405 SLC16A10Q8TF71 515 aa19.08■□□□□ 0.64
MTHFD1-204ENST00000553405 MAP3K15Q6ZN16 1313 aa19.07■□□□□ 0.64
MTHFD1-204ENST00000553405 RFC4P35249 363 aa19.07■□□□□ 0.64
MTHFD1-204ENST00000553405 FKBP8Q14318 412 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms