RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 KCNQ3O43525 872 aa15.36■□□□□ 0.05
TRAFD1-209ENST00000552896 CYP19A1P11511 503 aaPredicted RBP15.36■□□□□ 0.05
TRAFD1-209ENST00000552896 AMIGO3Q86WK7 504 aa15.36■□□□□ 0.05
TRAFD1-209ENST00000552896 CCDC87Q9NVE4 849 aa15.36■□□□□ 0.05
TRAFD1-209ENST00000552896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.35■□□□□ 0.05
TRAFD1-209ENST00000552896 COL23A1Q86Y22 540 aaPredicted RBP15.35■□□□□ 0.05
TRAFD1-209ENST00000552896 TEX13AQ9BXU3 409 aaPredicted RBP15.35■□□□□ 0.05
TRAFD1-209ENST00000552896 SPON1Q9HCB6 807 aa15.35■□□□□ 0.05
TRAFD1-209ENST00000552896 RTCBQ9Y3I0 505 aaKnown RBP15.35■□□□□ 0.05
TRAFD1-209ENST00000552896 RPS6KA4O75676 772 aa15.34■□□□□ 0.05
TRAFD1-209ENST00000552896 PHF14O94880 888 aa15.34■□□□□ 0.05
TRAFD1-209ENST00000552896 ZBTB7AO95365 584 aa15.34■□□□□ 0.05
TRAFD1-209ENST00000552896 STARD3NLO95772 234 aa15.34■□□□□ 0.05
TRAFD1-209ENST00000552896 COL15A1P39059 1388 aa15.34■□□□□ 0.05
TRAFD1-209ENST00000552896 KIF13BQ9NQT8 1826 aa15.33■□□□□ 0.05
TRAFD1-209ENST00000552896 SNRPA1P09661 255 aaKnown RBP15.33■□□□□ 0.04
TRAFD1-209ENST00000552896 CALD1Q05682 793 aaKnown RBP15.33■□□□□ 0.04
TRAFD1-209ENST00000552896 CCDC27Q2M243 656 aa15.33■□□□□ 0.04
TRAFD1-209ENST00000552896 INTS5Q6P9B9 1019 aaKnown RBP15.33■□□□□ 0.04
TRAFD1-209ENST00000552896 FAM9BQ8IZU0 186 aa15.33■□□□□ 0.04
TRAFD1-209ENST00000552896 TSPYL4Q9UJ04 414 aa15.33■□□□□ 0.04
TRAFD1-209ENST00000552896 SOS1Q07889 1333 aaPredicted RBP15.33■□□□□ 0.04
TRAFD1-209ENST00000552896 MIS18AQ9NYP9 233 aa15.32■□□□□ 0.04
TRAFD1-209ENST00000552896 PTGER2P43116 358 aa15.31■□□□□ 0.04
TRAFD1-209ENST00000552896 EIF4A1P60842 406 aaKnown RBP15.31■□□□□ 0.04
TRAFD1-209ENST00000552896 SGIP1Q9BQI5 828 aa15.31■□□□□ 0.04
TRAFD1-209ENST00000552896 ZBTB1Q9Y2K1 713 aa15.31■□□□□ 0.04
TRAFD1-209ENST00000552896 AFDNP55196 1824 aaKnown RBP15.31■□□□□ 0.04
TRAFD1-209ENST00000552896 CACNA1FO60840 1977 aa15.31■□□□□ 0.04
TRAFD1-209ENST00000552896 CHL1O00533 1208 aa15.3■□□□□ 0.04
TRAFD1-209ENST00000552896 NUP98P52948 1817 aa15.3■□□□□ 0.04
TRAFD1-209ENST00000552896 TRAPPC3LQ5T215 181 aa15.3■□□□□ 0.04
TRAFD1-209ENST00000552896 NGEFQ8N5V2 710 aa15.3■□□□□ 0.04
TRAFD1-209ENST00000552896 CFAP44Q96MT7 982 aa15.3■□□□□ 0.04
TRAFD1-209ENST00000552896 IFT57Q9NWB7 429 aa15.3■□□□□ 0.04
TRAFD1-209ENST00000552896 ANKRD36CQ5JPF3 1778 aa15.29■□□□□ 0.04
TRAFD1-209ENST00000552896 NRXN2Q9P2S2 1712 aa15.29■□□□□ 0.04
TRAFD1-209ENST00000552896 USP42Q9H9J4 1324 aaKnown RBP15.29■□□□□ 0.04
TRAFD1-209ENST00000552896 GIGYF1O75420 1035 aaPredicted RBP15.29■□□□□ 0.04
TRAFD1-209ENST00000552896 SMIM5Q71RC9 77 aa15.29■□□□□ 0.04
TRAFD1-209ENST00000552896 ATF5Q9Y2D1 282 aaPredicted RBP15.29■□□□□ 0.04
TRAFD1-209ENST00000552896 PRAMEF22A3QJZ6 481 aa15.28■□□□□ 0.04
TRAFD1-209ENST00000552896 ZNF853P0CG23 659 aa15.28■□□□□ 0.04
TRAFD1-209ENST00000552896 RFC4P35249 363 aa15.28■□□□□ 0.04
TRAFD1-209ENST00000552896 GNAI1P63096 354 aa15.28■□□□□ 0.04
TRAFD1-209ENST00000552896 ARHGEF1Q92888 912 aaKnown RBP15.28■□□□□ 0.04
TRAFD1-209ENST00000552896 IL16Q14005 1332 aa15.27■□□□□ 0.04
TRAFD1-209ENST00000552896 POLD1P28340 1107 aa15.27■□□□□ 0.04
TRAFD1-209ENST00000552896 IL6STP40189 918 aaPredicted RBP15.27■□□□□ 0.04
TRAFD1-209ENST00000552896 EIF5P55010 431 aaKnown RBP15.27■□□□□ 0.04
TRAFD1-209ENST00000552896 WWC1Q8IX03 1113 aa15.27■□□□□ 0.04
TRAFD1-209ENST00000552896 USP16Q9Y5T5 823 aa15.27■□□□□ 0.04
TRAFD1-209ENST00000552896 KIAA1551Q9HCM1 1747 aa15.26■□□□□ 0.03
TRAFD1-209ENST00000552896 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
TRAFD1-209ENST00000552896 CANXP27824 592 aaKnown RBP15.26■□□□□ 0.03
TRAFD1-209ENST00000552896 MSL1Q68DK7 614 aa15.26■□□□□ 0.03
TRAFD1-209ENST00000552896 MIER1Q8N108 512 aa15.26■□□□□ 0.03
TRAFD1-209ENST00000552896 MBIPQ9NS73 344 aa15.26■□□□□ 0.03
TRAFD1-209ENST00000552896 PPP1R1BQ9UD71 204 aaPredicted RBP15.26■□□□□ 0.03
TRAFD1-209ENST00000552896 LAS1LQ9Y4W2 734 aaKnown RBP15.26■□□□□ 0.03
TRAFD1-209ENST00000552896 A0A087WZG4 1122 aa15.25■□□□□ 0.03
TRAFD1-209ENST00000552896 HOXB7P09629 217 aa15.25■□□□□ 0.03
TRAFD1-209ENST00000552896 GYS1P13807 737 aa15.25■□□□□ 0.03
TRAFD1-209ENST00000552896 BRCA1P38398 1863 aaKnown RBP15.25■□□□□ 0.03
TRAFD1-209ENST00000552896 DLEC1Q9Y238 1755 aa15.24■□□□□ 0.03
TRAFD1-209ENST00000552896 ARFGEF2Q9Y6D5 1785 aa15.24■□□□□ 0.03
TRAFD1-209ENST00000552896 A1BGP04217 495 aa15.24■□□□□ 0.03
TRAFD1-209ENST00000552896 ARXQ96QS3 562 aa15.24■□□□□ 0.03
TRAFD1-209ENST00000552896 NARFQ9UHQ1 456 aa15.24■□□□□ 0.03
TRAFD1-209ENST00000552896 ZPR1O75312 459 aa15.23■□□□□ 0.03
TRAFD1-209ENST00000552896 NLGN1Q8N2Q7 840 aa15.23■□□□□ 0.03
TRAFD1-209ENST00000552896 SRP68Q9UHB9 627 aaKnown RBP15.23■□□□□ 0.03
TRAFD1-209ENST00000552896 SENP3-EIF4A1A0A087X0R7 540 aa15.22■□□□□ 0.03
TRAFD1-209ENST00000552896 NBPF26B4DH59 902 aa15.22■□□□□ 0.03
TRAFD1-209ENST00000552896 NBPF10Q6P3W6 841 aaKnown RBP15.22■□□□□ 0.03
TRAFD1-209ENST00000552896 NPM2Q86SE8 214 aaKnown RBP15.22■□□□□ 0.03
TRAFD1-209ENST00000552896 WDR63Q8IWG1 891 aa15.22■□□□□ 0.03
TRAFD1-209ENST00000552896 NBPF15Q8N660 670 aa15.22■□□□□ 0.03
TRAFD1-209ENST00000552896 ZNF330Q9Y3S2 320 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-209ENST00000552896 N4BP2Q86UW6 1770 aaPredicted RBP15.21■□□□□ 0.03
TRAFD1-209ENST00000552896 ZNF521Q96K83 1311 aa15.21■□□□□ 0.03
TRAFD1-209ENST00000552896 ANKRD31Q8N7Z5 1873 aa15.21■□□□□ 0.03
TRAFD1-209ENST00000552896 C10orf71Q711Q0 1435 aa15.21■□□□□ 0.03
TRAFD1-209ENST00000552896 KRT24Q2M2I5 525 aa15.21■□□□□ 0.03
TRAFD1-209ENST00000552896 USPL1Q5W0Q7 1092 aa15.21■□□□□ 0.03
TRAFD1-209ENST00000552896 RGL2O15211 777 aa15.2■□□□□ 0.02
TRAFD1-209ENST00000552896 MMP10P09238 476 aa15.2■□□□□ 0.02
TRAFD1-209ENST00000552896 PIP4K2AP48426 406 aaPredicted RBP15.2■□□□□ 0.02
TRAFD1-209ENST00000552896 FANCIQ9NVI1 1328 aa15.19■□□□□ 0.02
TRAFD1-209ENST00000552896 CAMTA2O94983 1202 aa15.19■□□□□ 0.02
TRAFD1-209ENST00000552896 FKBP8Q14318 412 aa15.19■□□□□ 0.02
TRAFD1-209ENST00000552896 DZIP3Q86Y13 1208 aaKnown RBP15.19■□□□□ 0.02
TRAFD1-209ENST00000552896 TSR2Q969E8 191 aaKnown RBP15.19■□□□□ 0.02
TRAFD1-209ENST00000552896 FHDC1Q9C0D6 1143 aaPredicted RBP15.19■□□□□ 0.02
TRAFD1-209ENST00000552896 BCL2L12Q9HB09 334 aa15.19■□□□□ 0.02
TRAFD1-209ENST00000552896 SALL2Q9Y467 1007 aaPredicted RBP15.19■□□□□ 0.02
TRAFD1-209ENST00000552896 HDGFL1Q5TGJ6 251 aa15.18■□□□□ 0.02
TRAFD1-209ENST00000552896 DUSP27Q5VZP5 1158 aa15.18■□□□□ 0.02
TRAFD1-209ENST00000552896 COL11A2P13942 1736 aaPredicted RBP15.17■□□□□ 0.02
TRAFD1-209ENST00000552896 CARMIL3Q8ND23 1372 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms