RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SNRPA1P09661 255 aaKnown RBP24.2■■□□□ 1.46
PRPF40B-216ENST00000552301 ARXQ96QS3 562 aa24.2■■□□□ 1.46
PRPF40B-216ENST00000552301 SGIP1Q9BQI5 828 aa24.2■■□□□ 1.46
PRPF40B-216ENST00000552301 TSPYL4Q9UJ04 414 aa24.2■■□□□ 1.46
PRPF40B-216ENST00000552301 ZBTB1Q9Y2K1 713 aa24.2■■□□□ 1.46
PRPF40B-216ENST00000552301 KDM3BQ7LBC6 1761 aa24.2■■□□□ 1.46
PRPF40B-216ENST00000552301 ARHGEF1Q92888 912 aaKnown RBP24.19■■□□□ 1.46
PRPF40B-216ENST00000552301 SOS1Q07889 1333 aaPredicted RBP24.18■■□□□ 1.46
PRPF40B-216ENST00000552301 CANXP27824 592 aaKnown RBP24.18■■□□□ 1.46
PRPF40B-216ENST00000552301 NPM2Q86SE8 214 aaKnown RBP24.18■■□□□ 1.46
PRPF40B-216ENST00000552301 TRIM35Q9UPQ4 493 aa24.18■■□□□ 1.46
PRPF40B-216ENST00000552301 COL24A1Q17RW2 1714 aa24.17■■□□□ 1.46
PRPF40B-216ENST00000552301 C4AP0C0L4 1744 aa24.16■■□□□ 1.46
PRPF40B-216ENST00000552301 KLHL34Q8N239 644 aa24.16■■□□□ 1.46
PRPF40B-216ENST00000552301 BABAM1Q9NWV8 329 aa24.16■■□□□ 1.46
PRPF40B-216ENST00000552301 LAS1LQ9Y4W2 734 aaKnown RBP24.16■■□□□ 1.46
PRPF40B-216ENST00000552301 COL15A1P39059 1388 aa24.16■■□□□ 1.46
PRPF40B-216ENST00000552301 CALD1Q05682 793 aaKnown RBP24.15■■□□□ 1.46
PRPF40B-216ENST00000552301 FAM9BQ8IZU0 186 aa24.15■■□□□ 1.46
PRPF40B-216ENST00000552301 ZNF330Q9Y3S2 320 aaPredicted RBP24.15■■□□□ 1.46
PRPF40B-216ENST00000552301 ZPR1O75312 459 aa24.14■■□□□ 1.45
PRPF40B-216ENST00000552301 EIF4A1P60842 406 aaKnown RBP24.14■■□□□ 1.45
PRPF40B-216ENST00000552301 NLGN1Q8N2Q7 840 aa24.13■■□□□ 1.45
PRPF40B-216ENST00000552301 USP16Q9Y5T5 823 aa24.13■■□□□ 1.45
PRPF40B-216ENST00000552301 USP42Q9H9J4 1324 aaKnown RBP24.12■■□□□ 1.45
PRPF40B-216ENST00000552301 LAMB4A4D0S4 1761 aa24.12■■□□□ 1.45
PRPF40B-216ENST00000552301 A0A087WZG4 1122 aa24.12■■□□□ 1.45
PRPF40B-216ENST00000552301 PRAMEF22A3QJZ6 481 aa24.12■■□□□ 1.45
PRPF40B-216ENST00000552301 FHDC1Q9C0D6 1143 aaPredicted RBP24.12■■□□□ 1.45
PRPF40B-216ENST00000552301 A1BGP04217 495 aa24.11■■□□□ 1.45
PRPF40B-216ENST00000552301 IL6STP40189 918 aaPredicted RBP24.11■■□□□ 1.45
PRPF40B-216ENST00000552301 SRP68Q9UHB9 627 aaKnown RBP24.11■■□□□ 1.45
PRPF40B-216ENST00000552301 GIGYF1O75420 1035 aaPredicted RBP24.1■■□□□ 1.45
PRPF40B-216ENST00000552301 GYS1P13807 737 aa24.1■■□□□ 1.45
PRPF40B-216ENST00000552301 MMP10P09238 476 aa24.09■■□□□ 1.45
PRPF40B-216ENST00000552301 EIF5P55010 431 aaKnown RBP24.09■■□□□ 1.45
PRPF40B-216ENST00000552301 CHL1O00533 1208 aa24.08■■□□□ 1.45
PRPF40B-216ENST00000552301 DIEXFQ68CQ4 756 aaKnown RBP24.08■■□□□ 1.45
PRPF40B-216ENST00000552301 CFAP44Q96MT7 982 aa24.08■■□□□ 1.45
PRPF40B-216ENST00000552301 NARFQ9UHQ1 456 aa24.08■■□□□ 1.45
PRPF40B-216ENST00000552301 SENP3-EIF4A1A0A087X0R7 540 aa24.07■■□□□ 1.44
PRPF40B-216ENST00000552301 USPL1Q5W0Q7 1092 aa24.07■■□□□ 1.44
PRPF40B-216ENST00000552301 SYT17Q9BSW7 474 aa24.07■■□□□ 1.44
PRPF40B-216ENST00000552301 PIP4K2AP48426 406 aaPredicted RBP24.06■■□□□ 1.44
PRPF40B-216ENST00000552301 GNAI1P63096 354 aa24.06■■□□□ 1.44
PRPF40B-216ENST00000552301 IFT57Q9NWB7 429 aa24.06■■□□□ 1.44
PRPF40B-216ENST00000552301 CCER2I3L3R5 266 aa24.05■■□□□ 1.44
PRPF40B-216ENST00000552301 FKBP8Q14318 412 aa24.05■■□□□ 1.44
PRPF40B-216ENST00000552301 CCDC27Q2M243 656 aa24.05■■□□□ 1.44
PRPF40B-216ENST00000552301 PARP3Q9Y6F1 533 aa24.05■■□□□ 1.44
PRPF40B-216ENST00000552301 DCAF8L1A6NGE4 600 aa24.04■■□□□ 1.44
PRPF40B-216ENST00000552301 TBC1D2BQ9UPU7 963 aa24.03■■□□□ 1.44
PRPF40B-216ENST00000552301 EIF2S2P20042 333 aaKnown RBP24.02■■□□□ 1.44
PRPF40B-216ENST00000552301 NCBP3Q53F19 620 aaKnown RBP24.02■■□□□ 1.44
PRPF40B-216ENST00000552301 DZIP3Q86Y13 1208 aaKnown RBP24.02■■□□□ 1.44
PRPF40B-216ENST00000552301 WWC1Q8IX03 1113 aa24.02■■□□□ 1.44
PRPF40B-216ENST00000552301 MBIPQ9NS73 344 aa24.02■■□□□ 1.44
PRPF40B-216ENST00000552301 SALL2Q9Y467 1007 aaPredicted RBP24.02■■□□□ 1.44
PRPF40B-216ENST00000552301 SCN7AQ01118 1682 aa24.02■■□□□ 1.44
PRPF40B-216ENST00000552301 NBPF26B4DH59 902 aa24.01■■□□□ 1.43
PRPF40B-216ENST00000552301 NBPF10Q6P3W6 841 aaKnown RBP24.01■■□□□ 1.43
PRPF40B-216ENST00000552301 NBPF15Q8N660 670 aa24.01■■□□□ 1.43
PRPF40B-216ENST00000552301 CD2APQ9Y5K6 639 aa24.01■■□□□ 1.43
PRPF40B-216ENST00000552301 ERBB4Q15303 1308 aa24.01■■□□□ 1.43
PRPF40B-216ENST00000552301 ZNF853P0CG23 659 aa23.99■■□□□ 1.43
PRPF40B-216ENST00000552301 NGEFQ8N5V2 710 aa23.99■■□□□ 1.43
PRPF40B-216ENST00000552301 MYL6BP14649 208 aa23.98■■□□□ 1.43
PRPF40B-216ENST00000552301 KRT24Q2M2I5 525 aa23.98■■□□□ 1.43
PRPF40B-216ENST00000552301 BCL2L12Q9HB09 334 aa23.98■■□□□ 1.43
PRPF40B-216ENST00000552301 ZNF652Q9Y2D9 606 aa23.98■■□□□ 1.43
PRPF40B-216ENST00000552301 CAMTA2O94983 1202 aa23.97■■□□□ 1.43
PRPF40B-216ENST00000552301 HOXB7P09629 217 aa23.97■■□□□ 1.43
PRPF40B-216ENST00000552301 NFIXQ14938 502 aa23.97■■□□□ 1.43
PRPF40B-216ENST00000552301 BICDL1Q6ZP65 573 aa23.97■■□□□ 1.43
PRPF40B-216ENST00000552301 IL16Q14005 1332 aa23.96■■□□□ 1.43
PRPF40B-216ENST00000552301 DDR1Q08345 913 aa23.96■■□□□ 1.43
PRPF40B-216ENST00000552301 NLGN2Q8NFZ4 835 aa23.96■■□□□ 1.43
PRPF40B-216ENST00000552301 NECTIN2Q92692 538 aa23.96■■□□□ 1.43
PRPF40B-216ENST00000552301 BCORQ6W2J9 1755 aa23.96■■□□□ 1.43
PRPF40B-216ENST00000552301 TM4SF1P30408 202 aa23.95■■□□□ 1.42
PRPF40B-216ENST00000552301 HDGFL1Q5TGJ6 251 aa23.95■■□□□ 1.42
PRPF40B-216ENST00000552301 DUSP27Q5VZP5 1158 aa23.95■■□□□ 1.42
PRPF40B-216ENST00000552301 KIF6Q6ZMV9 814 aa23.95■■□□□ 1.42
PRPF40B-216ENST00000552301 POLRMTO00411 1230 aaKnown RBP23.94■■□□□ 1.42
PRPF40B-216ENST00000552301 C10orf71Q711Q0 1435 aa23.93■■□□□ 1.42
PRPF40B-216ENST00000552301 TBC1D9BQ66K14 1250 aa23.93■■□□□ 1.42
PRPF40B-216ENST00000552301 WDR63Q8IWG1 891 aa23.93■■□□□ 1.42
PRPF40B-216ENST00000552301 PELP1Q8IZL8 1130 aaKnown RBP23.93■■□□□ 1.42
PRPF40B-216ENST00000552301 CLEC4GQ6UXB4 293 aa23.92■■□□□ 1.42
PRPF40B-216ENST00000552301 TSR2Q969E8 191 aaKnown RBP23.92■■□□□ 1.42
PRPF40B-216ENST00000552301 CARMIL3Q8ND23 1372 aa23.91■■□□□ 1.42
PRPF40B-216ENST00000552301 RGL2O15211 777 aa23.91■■□□□ 1.42
PRPF40B-216ENST00000552301 NPHP1O15259 732 aa23.91■■□□□ 1.42
PRPF40B-216ENST00000552301 SERPINB2P05120 415 aa23.91■■□□□ 1.42
PRPF40B-216ENST00000552301 MIER1Q8N108 512 aa23.91■■□□□ 1.42
PRPF40B-216ENST00000552301 SETDB2Q96T68 719 aa23.91■■□□□ 1.42
PRPF40B-216ENST00000552301 ELL2O00472 640 aaPredicted RBP23.9■■□□□ 1.42
PRPF40B-216ENST00000552301 GPR162Q16538 588 aa23.9■■□□□ 1.42
PRPF40B-216ENST00000552301 CHMP4AQ9BY43 222 aa23.9■■□□□ 1.42
PRPF40B-216ENST00000552301 MAP3K15Q6ZN16 1313 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms