RNA–Protein interactions for RNA: ENST00000552180.5

GPN3-210, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 640 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-210ENST00000552180 STARD3NLO95772 234 aa25.59■■□□□ 1.69
GPN3-210ENST00000552180 RFC4P35249 363 aa25.59■■□□□ 1.69
GPN3-210ENST00000552180 GYS1P13807 737 aa25.58■■□□□ 1.69
GPN3-210ENST00000552180 RRP7AQ9Y3A4 280 aaKnown RBP25.58■■□□□ 1.69
GPN3-210ENST00000552180 C4AP0C0L4 1744 aa25.57■■□□□ 1.68
GPN3-210ENST00000552180 PNISRQ8TF01 805 aaKnown RBP25.57■■□□□ 1.68
GPN3-210ENST00000552180 USP16Q9Y5T5 823 aa25.56■■□□□ 1.68
GPN3-210ENST00000552180 PRAMEF22A3QJZ6 481 aa25.55■■□□□ 1.68
GPN3-210ENST00000552180 NLGN1Q8N2Q7 840 aa25.55■■□□□ 1.68
GPN3-210ENST00000552180 SRP68Q9UHB9 627 aaKnown RBP25.55■■□□□ 1.68
GPN3-210ENST00000552180 TRIM35Q9UPQ4 493 aa25.55■■□□□ 1.68
GPN3-210ENST00000552180 USP42Q9H9J4 1324 aaKnown RBP25.55■■□□□ 1.68
GPN3-210ENST00000552180 SNRPA1P09661 255 aaKnown RBP25.54■■□□□ 1.68
GPN3-210ENST00000552180 EIF5P55010 431 aaKnown RBP25.54■■□□□ 1.68
GPN3-210ENST00000552180 LMOD3Q0VAK6 560 aa25.54■■□□□ 1.68
GPN3-210ENST00000552180 A1BGP04217 495 aa25.53■■□□□ 1.68
GPN3-210ENST00000552180 CANXP27824 592 aaKnown RBP25.53■■□□□ 1.68
GPN3-210ENST00000552180 NEUROD2Q15784 382 aa25.53■■□□□ 1.68
GPN3-210ENST00000552180 KDM3BQ7LBC6 1761 aa25.53■■□□□ 1.68
GPN3-210ENST00000552180 COL15A1P39059 1388 aa25.52■■□□□ 1.68
GPN3-210ENST00000552180 GOLGB1Q14789 3259 aaKnown RBP25.51■■□□□ 1.67
GPN3-210ENST00000552180 UTRNP46939 3433 aa25.51■■□□□ 1.67
GPN3-210ENST00000552180 MMP10P09238 476 aa25.51■■□□□ 1.67
GPN3-210ENST00000552180 EIF4A1P60842 406 aaKnown RBP25.51■■□□□ 1.67
GPN3-210ENST00000552180 FKBP8Q14318 412 aa25.5■■□□□ 1.67
GPN3-210ENST00000552180 NARFQ9UHQ1 456 aa25.5■■□□□ 1.67
GPN3-210ENST00000552180 APAF1O14727 1248 aa25.49■■□□□ 1.67
GPN3-210ENST00000552180 IL6STP40189 918 aaPredicted RBP25.49■■□□□ 1.67
GPN3-210ENST00000552180 KLHL34Q8N239 644 aa25.49■■□□□ 1.67
GPN3-210ENST00000552180 NLGN2Q8NFZ4 835 aa25.49■■□□□ 1.67
GPN3-210ENST00000552180 BABAM1Q9NWV8 329 aa25.49■■□□□ 1.67
GPN3-210ENST00000552180 CD2APQ9Y5K6 639 aa25.49■■□□□ 1.67
GPN3-210ENST00000552180 USPL1Q5W0Q7 1092 aa25.48■■□□□ 1.67
GPN3-210ENST00000552180 MRS2Q9HD23 443 aa25.48■■□□□ 1.67
GPN3-210ENST00000552180 ZPR1O75312 459 aa25.47■■□□□ 1.67
GPN3-210ENST00000552180 GIGYF1O75420 1035 aaPredicted RBP25.47■■□□□ 1.67
GPN3-210ENST00000552180 BCL2L12Q9HB09 334 aa25.47■■□□□ 1.67
GPN3-210ENST00000552180 TM4SF1P30408 202 aa25.46■■□□□ 1.67
GPN3-210ENST00000552180 TSPYL4Q9UJ04 414 aa25.46■■□□□ 1.67
GPN3-210ENST00000552180 A0A087WZG4 1122 aa25.45■■□□□ 1.66
GPN3-210ENST00000552180 CHL1O00533 1208 aa25.45■■□□□ 1.66
GPN3-210ENST00000552180 NBPF26B4DH59 902 aa25.44■■□□□ 1.66
GPN3-210ENST00000552180 NBPF10Q6P3W6 841 aaKnown RBP25.44■■□□□ 1.66
GPN3-210ENST00000552180 NBPF15Q8N660 670 aa25.44■■□□□ 1.66
GPN3-210ENST00000552180 PIP4K2AP48426 406 aaPredicted RBP25.43■■□□□ 1.66
GPN3-210ENST00000552180 DDR1Q08345 913 aa25.43■■□□□ 1.66
GPN3-210ENST00000552180 TBC1D2BQ9UPU7 963 aa25.42■■□□□ 1.66
GPN3-210ENST00000552180 PARP3Q9Y6F1 533 aa25.41■■□□□ 1.66
GPN3-210ENST00000552180 POLRMTO00411 1230 aaKnown RBP25.4■■□□□ 1.66
GPN3-210ENST00000552180 ZNF330Q9Y3S2 320 aaPredicted RBP25.4■■□□□ 1.66
GPN3-210ENST00000552180 LAMB4A4D0S4 1761 aa25.39■■□□□ 1.66
GPN3-210ENST00000552180 DCAF8L1A6NGE4 600 aa25.39■■□□□ 1.66
GPN3-210ENST00000552180 NFIXQ14938 502 aa25.39■■□□□ 1.66
GPN3-210ENST00000552180 KIF13BQ9NQT8 1826 aa25.38■■□□□ 1.65
GPN3-210ENST00000552180 CAMTA2O94983 1202 aa25.38■■□□□ 1.65
GPN3-210ENST00000552180 C10orf71Q711Q0 1435 aa25.37■■□□□ 1.65
GPN3-210ENST00000552180 ZNF853P0CG23 659 aa25.37■■□□□ 1.65
GPN3-210ENST00000552180 CFAP44Q96MT7 982 aa25.37■■□□□ 1.65
GPN3-210ENST00000552180 DZIP3Q86Y13 1208 aaKnown RBP25.36■■□□□ 1.65
GPN3-210ENST00000552180 LAS1LQ9Y4W2 734 aaKnown RBP25.36■■□□□ 1.65
GPN3-210ENST00000552180 SCN7AQ01118 1682 aa25.35■■□□□ 1.65
GPN3-210ENST00000552180 KRT24Q2M2I5 525 aa25.34■■□□□ 1.65
GPN3-210ENST00000552180 TBC1D9BQ66K14 1250 aa25.34■■□□□ 1.65
GPN3-210ENST00000552180 NPM2Q86SE8 214 aaKnown RBP25.34■■□□□ 1.65
GPN3-210ENST00000552180 TGFB2P61812 414 aa25.33■■□□□ 1.65
GPN3-210ENST00000552180 GPR162Q16538 588 aa25.33■■□□□ 1.65
GPN3-210ENST00000552180 CCDC27Q2M243 656 aa25.33■■□□□ 1.65
GPN3-210ENST00000552180 NCBP3Q53F19 620 aaKnown RBP25.33■■□□□ 1.65
GPN3-210ENST00000552180 KIAA1551Q9HCM1 1747 aa25.33■■□□□ 1.65
GPN3-210ENST00000552180 YBX3P16989 372 aaKnown RBP eCLIP25.32■■□□□ 1.641e-7■■□□□ 13.6
GPN3-210ENST00000552180 PDIA6Q15084 440 aa25.32■■□□□ 1.64
GPN3-210ENST00000552180 MBIPQ9NS73 344 aa25.32■■□□□ 1.64
GPN3-210ENST00000552180 IFT57Q9NWB7 429 aa25.32■■□□□ 1.64
GPN3-210ENST00000552180 ERBB4Q15303 1308 aa25.32■■□□□ 1.64
GPN3-210ENST00000552180 NRXN2Q9P2S2 1712 aa25.32■■□□□ 1.64
GPN3-210ENST00000552180 SENP3-EIF4A1A0A087X0R7 540 aa25.31■■□□□ 1.64
GPN3-210ENST00000552180 SERPINB2P05120 415 aa25.31■■□□□ 1.64
GPN3-210ENST00000552180 CALD1Q05682 793 aaKnown RBP25.31■■□□□ 1.64
GPN3-210ENST00000552180 CLEC4GQ6UXB4 293 aa25.31■■□□□ 1.64
GPN3-210ENST00000552180 LRP10Q7Z4F1 713 aa25.31■■□□□ 1.64
GPN3-210ENST00000552180 PXDNLA1KZ92 1463 aa25.31■■□□□ 1.64
GPN3-210ENST00000552180 BCORQ6W2J9 1755 aa25.31■■□□□ 1.64
GPN3-210ENST00000552180 AFDNP55196 1824 aaKnown RBP25.3■■□□□ 1.64
GPN3-210ENST00000552180 RGL2O15211 777 aa25.3■■□□□ 1.64
GPN3-210ENST00000552180 BICDL1Q6ZP65 573 aa25.3■■□□□ 1.64
GPN3-210ENST00000552180 A0A0G2JLW4 131 aa25.29■■□□□ 1.64
GPN3-210ENST00000552180 EIF2S2P20042 333 aaKnown RBP25.29■■□□□ 1.64
GPN3-210ENST00000552180 GNAI1P63096 354 aa25.29■■□□□ 1.64
GPN3-210ENST00000552180 WWC1Q8IX03 1113 aa25.29■■□□□ 1.64
GPN3-210ENST00000552180 MYL6BP14649 208 aa25.28■■□□□ 1.64
GPN3-210ENST00000552180 PELP1Q8IZL8 1130 aaKnown RBP25.28■■□□□ 1.64
GPN3-210ENST00000552180 FAM9BQ8IZU0 186 aa25.28■■□□□ 1.64
GPN3-210ENST00000552180 DPEP1P16444 411 aa25.27■■□□□ 1.64
GPN3-210ENST00000552180 KCNA3P22001 575 aa25.27■■□□□ 1.64
GPN3-210ENST00000552180 TTLL7Q6ZT98 887 aa25.27■■□□□ 1.64
GPN3-210ENST00000552180 NGEFQ8N5V2 710 aa25.27■■□□□ 1.64
GPN3-210ENST00000552180 N4BP2Q86UW6 1770 aaPredicted RBP25.26■■□□□ 1.63
GPN3-210ENST00000552180 HOXB7P09629 217 aa25.26■■□□□ 1.63
GPN3-210ENST00000552180 HLFQ16534 295 aa25.26■■□□□ 1.63
GPN3-210ENST00000552180 PROSER3Q2NL68 480 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms