RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TRAPPC3LQ5T215 181 aa13.9□□□□□ -0.18
PTCH1-225ENST00000551845 BABAM1Q9NWV8 329 aa13.9□□□□□ -0.18
PTCH1-225ENST00000551845 RTCBQ9Y3I0 505 aaKnown RBP13.9□□□□□ -0.18
PTCH1-225ENST00000551845 GNPATO15228 680 aa13.89□□□□□ -0.19
PTCH1-225ENST00000551845 RPS6KA4O75676 772 aa13.89□□□□□ -0.19
PTCH1-225ENST00000551845 SNRPA1P09661 255 aaKnown RBP13.89□□□□□ -0.19
PTCH1-225ENST00000551845 CALD1Q05682 793 aaKnown RBP13.89□□□□□ -0.19
PTCH1-225ENST00000551845 COL23A1Q86Y22 540 aaPredicted RBP13.89□□□□□ -0.19
PTCH1-225ENST00000551845 CEP350Q5VT06 3117 aa13.89□□□□□ -0.19
PTCH1-225ENST00000551845 LY75O60449 1722 aa13.88□□□□□ -0.19
PTCH1-225ENST00000551845 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
PTCH1-225ENST00000551845 CYP19A1P11511 503 aaPredicted RBP13.88□□□□□ -0.19
PTCH1-225ENST00000551845 SSFA2P28290 1259 aa13.88□□□□□ -0.19
PTCH1-225ENST00000551845 CRKLP46109 303 aaKnown RBP13.88□□□□□ -0.19
PTCH1-225ENST00000551845 TSPYL4Q9UJ04 414 aa13.88□□□□□ -0.19
PTCH1-225ENST00000551845 LAS1LQ9Y4W2 734 aaKnown RBP13.88□□□□□ -0.19
PTCH1-225ENST00000551845 CNTNAP4Q9C0A0 1308 aa13.88□□□□□ -0.19
PTCH1-225ENST00000551845 TOGARAM1Q9Y4F4 1720 aa13.87□□□□□ -0.19
PTCH1-225ENST00000551845 HEG1Q9ULI3 1381 aa13.87□□□□□ -0.19
PTCH1-225ENST00000551845 PHF14O94880 888 aa13.87□□□□□ -0.19
PTCH1-225ENST00000551845 MIER1Q8N108 512 aa13.87□□□□□ -0.19
PTCH1-225ENST00000551845 CD2APQ9Y5K6 639 aa13.87□□□□□ -0.19
PTCH1-225ENST00000551845 MRC1P22897 1456 aa13.87□□□□□ -0.19
PTCH1-225ENST00000551845 CHL1O00533 1208 aa13.86□□□□□ -0.19
PTCH1-225ENST00000551845 HOXD11P31277 338 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-225ENST00000551845 EIF4A1P60842 406 aaKnown RBP13.86□□□□□ -0.19
PTCH1-225ENST00000551845 CCDC27Q2M243 656 aa13.86□□□□□ -0.19
PTCH1-225ENST00000551845 INTS5Q6P9B9 1019 aaKnown RBP13.86□□□□□ -0.19
PTCH1-225ENST00000551845 NPM2Q86SE8 214 aaKnown RBP13.86□□□□□ -0.19
PTCH1-225ENST00000551845 CCDC87Q9NVE4 849 aa13.86□□□□□ -0.19
PTCH1-225ENST00000551845 WWC3Q9ULE0 1092 aa13.86□□□□□ -0.19
PTCH1-225ENST00000551845 USP16Q9Y5T5 823 aa13.86□□□□□ -0.19
PTCH1-225ENST00000551845 ITGB4P16144 1822 aa13.85□□□□□ -0.19
PTCH1-225ENST00000551845 ADCY9O60503 1353 aa13.85□□□□□ -0.19
PTCH1-225ENST00000551845 RFC4P35249 363 aa13.85□□□□□ -0.19
PTCH1-225ENST00000551845 SMIM5Q71RC9 77 aa13.85□□□□□ -0.19
PTCH1-225ENST00000551845 NGEFQ8N5V2 710 aa13.85□□□□□ -0.19
PTCH1-225ENST00000551845 ARHGEF1Q92888 912 aaKnown RBP13.85□□□□□ -0.19
PTCH1-225ENST00000551845 CFAP44Q96MT7 982 aa13.85□□□□□ -0.19
PTCH1-225ENST00000551845 CANXP27824 592 aaKnown RBP13.84□□□□□ -0.19
PTCH1-225ENST00000551845 APLP1P51693 650 aa13.84□□□□□ -0.19
PTCH1-225ENST00000551845 SALL2Q9Y467 1007 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-225ENST00000551845 GNAI1P63096 354 aa13.83□□□□□ -0.2
PTCH1-225ENST00000551845 AMIGO3Q86WK7 504 aa13.83□□□□□ -0.2
PTCH1-225ENST00000551845 WWC1Q8IX03 1113 aa13.83□□□□□ -0.2
PTCH1-225ENST00000551845 SCN11AQ9UI33 1791 aa13.83□□□□□ -0.2
PTCH1-225ENST00000551845 GOLGB1Q14789 3259 aaKnown RBP13.82□□□□□ -0.2
PTCH1-225ENST00000551845 A0A087WZG4 1122 aa13.82□□□□□ -0.2
PTCH1-225ENST00000551845 PRAMEF22A3QJZ6 481 aa13.82□□□□□ -0.2
PTCH1-225ENST00000551845 KIF3CO14782 793 aa13.82□□□□□ -0.2
PTCH1-225ENST00000551845 A1BGP04217 495 aa13.82□□□□□ -0.2
PTCH1-225ENST00000551845 NLGN1Q8N2Q7 840 aa13.82□□□□□ -0.2
PTCH1-225ENST00000551845 IFT57Q9NWB7 429 aa13.82□□□□□ -0.2
PTCH1-225ENST00000551845 ZBTB1Q9Y2K1 713 aa13.82□□□□□ -0.2
PTCH1-225ENST00000551845 ADAMTS7Q9UKP4 1686 aa13.82□□□□□ -0.2
PTCH1-225ENST00000551845 ZPR1O75312 459 aa13.81□□□□□ -0.2
PTCH1-225ENST00000551845 ZNF853P0CG23 659 aa13.81□□□□□ -0.2
PTCH1-225ENST00000551845 IL6STP40189 918 aaPredicted RBP13.81□□□□□ -0.2
PTCH1-225ENST00000551845 C5P01031 1676 aa13.8□□□□□ -0.2
PTCH1-225ENST00000551845 EIF5P55010 431 aaKnown RBP13.8□□□□□ -0.2
PTCH1-225ENST00000551845 WDR63Q8IWG1 891 aa13.8□□□□□ -0.2
PTCH1-225ENST00000551845 ZNF330Q9Y3S2 320 aaPredicted RBP13.8□□□□□ -0.2
PTCH1-225ENST00000551845 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
PTCH1-225ENST00000551845 CAPN15O75808 1086 aa13.79□□□□□ -0.2
PTCH1-225ENST00000551845 EIF2S2P20042 333 aaKnown RBP13.79□□□□□ -0.2
PTCH1-225ENST00000551845 MBIPQ9NS73 344 aa13.79□□□□□ -0.2
PTCH1-225ENST00000551845 SOS1Q07889 1333 aaPredicted RBP13.79□□□□□ -0.2
PTCH1-225ENST00000551845 NARFQ9UHQ1 456 aa13.78□□□□□ -0.2
PTCH1-225ENST00000551845 TOMM70O94826 608 aa13.77□□□□□ -0.21
PTCH1-225ENST00000551845 GYS1P13807 737 aa13.77□□□□□ -0.21
PTCH1-225ENST00000551845 IL16Q14005 1332 aa13.77□□□□□ -0.21
PTCH1-225ENST00000551845 DNAJC5GQ8N7S2 189 aa13.77□□□□□ -0.21
PTCH1-225ENST00000551845 CHMP4AQ9BY43 222 aa13.77□□□□□ -0.21
PTCH1-225ENST00000551845 TBC1D2BQ9UPU7 963 aa13.77□□□□□ -0.21
PTCH1-225ENST00000551845 C4BP0C0L5 1744 aa13.76□□□□□ -0.21
PTCH1-225ENST00000551845 NBPF26B4DH59 902 aa13.76□□□□□ -0.21
PTCH1-225ENST00000551845 PIP4K2AP48426 406 aaPredicted RBP13.76□□□□□ -0.21
PTCH1-225ENST00000551845 DUSP27Q5VZP5 1158 aa13.76□□□□□ -0.21
PTCH1-225ENST00000551845 USPL1Q5W0Q7 1092 aa13.76□□□□□ -0.21
PTCH1-225ENST00000551845 NBPF10Q6P3W6 841 aaKnown RBP13.76□□□□□ -0.21
PTCH1-225ENST00000551845 NBPF15Q8N660 670 aa13.76□□□□□ -0.21
PTCH1-225ENST00000551845 SRP68Q9UHB9 627 aaKnown RBP13.76□□□□□ -0.21
PTCH1-225ENST00000551845 TAF1LQ8IZX4 1826 aa13.76□□□□□ -0.21
PTCH1-225ENST00000551845 USP42Q9H9J4 1324 aaKnown RBP13.75□□□□□ -0.21
PTCH1-225ENST00000551845 ELL2O00472 640 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-225ENST00000551845 HOXB7P09629 217 aa13.75□□□□□ -0.21
PTCH1-225ENST00000551845 KRT24Q2M2I5 525 aa13.75□□□□□ -0.21
PTCH1-225ENST00000551845 COL15A1P39059 1388 aa13.74□□□□□ -0.21
PTCH1-225ENST00000551845 ERBB4Q15303 1308 aa13.74□□□□□ -0.21
PTCH1-225ENST00000551845 MMP10P09238 476 aa13.74□□□□□ -0.21
PTCH1-225ENST00000551845 MYL6BP14649 208 aa13.74□□□□□ -0.21
PTCH1-225ENST00000551845 GOLGA2Q08379 1002 aa13.74□□□□□ -0.21
PTCH1-225ENST00000551845 FKBP8Q14318 412 aa13.74□□□□□ -0.21
PTCH1-225ENST00000551845 DZIP3Q86Y13 1208 aaKnown RBP13.74□□□□□ -0.21
PTCH1-225ENST00000551845 PARP3Q9Y6F1 533 aa13.74□□□□□ -0.21
PTCH1-225ENST00000551845 ZNF831Q5JPB2 1677 aa13.74□□□□□ -0.21
PTCH1-225ENST00000551845 COL13A1Q5TAT6 717 aaPredicted RBP13.73□□□□□ -0.21
PTCH1-225ENST00000551845 HDGFL1Q5TGJ6 251 aa13.73□□□□□ -0.21
PTCH1-225ENST00000551845 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
PTCH1-225ENST00000551845 MYH16Q9H6N6 1097 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms