RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 GNPATO15228 680 aa24.43■■□□□ 1.5
CTDSP2-207ENST00000551594 RC3H1Q5TC82 1133 aaKnown RBP24.43■■□□□ 1.5
CTDSP2-207ENST00000551594 TEX13AQ9BXU3 409 aaPredicted RBP24.43■■□□□ 1.5
CTDSP2-207ENST00000551594 PDGFDQ9GZP0 370 aaPredicted RBP24.43■■□□□ 1.5
CTDSP2-207ENST00000551594 UBR3Q6ZT12 1888 aa24.43■■□□□ 1.5
CTDSP2-207ENST00000551594 CNTNAP4Q9C0A0 1308 aa24.42■■□□□ 1.5
CTDSP2-207ENST00000551594 STARD3NLO95772 234 aa24.42■■□□□ 1.5
CTDSP2-207ENST00000551594 HMGB2P26583 209 aaKnown RBP24.42■■□□□ 1.5
CTDSP2-207ENST00000551594 A1BGP04217 495 aa24.41■■□□□ 1.5
CTDSP2-207ENST00000551594 CCDC87Q9NVE4 849 aa24.41■■□□□ 1.5
CTDSP2-207ENST00000551594 PNPLA7Q6ZV29 1317 aa24.4■■□□□ 1.5
CTDSP2-207ENST00000551594 PHF14O94880 888 aa24.4■■□□□ 1.5
CTDSP2-207ENST00000551594 ZBTB1Q9Y2K1 713 aa24.4■■□□□ 1.5
CTDSP2-207ENST00000551594 CANXP27824 592 aaKnown RBP24.39■■□□□ 1.49
CTDSP2-207ENST00000551594 PIP4K2AP48426 406 aaPredicted RBP24.39■■□□□ 1.49
CTDSP2-207ENST00000551594 C8orf58Q8NAV2 365 aa24.39■■□□□ 1.49
CTDSP2-207ENST00000551594 FANCIQ9NVI1 1328 aa24.38■■□□□ 1.49
CTDSP2-207ENST00000551594 ELL2O00472 640 aaPredicted RBP24.38■■□□□ 1.49
CTDSP2-207ENST00000551594 RPS6KA4O75676 772 aa24.38■■□□□ 1.49
CTDSP2-207ENST00000551594 GOLGA2Q08379 1002 aa24.38■■□□□ 1.49
CTDSP2-207ENST00000551594 CDCA7LQ96GN5 454 aa24.38■■□□□ 1.49
CTDSP2-207ENST00000551594 LAMB4A4D0S4 1761 aa24.38■■□□□ 1.49
CTDSP2-207ENST00000551594 QSER1Q2KHR3 1735 aa24.38■■□□□ 1.49
CTDSP2-207ENST00000551594 EIF2S2P20042 333 aaKnown RBP24.37■■□□□ 1.49
CTDSP2-207ENST00000551594 DUSP27Q5VZP5 1158 aa24.37■■□□□ 1.49
CTDSP2-207ENST00000551594 COL23A1Q86Y22 540 aaPredicted RBP24.37■■□□□ 1.49
CTDSP2-207ENST00000551594 RTCBQ9Y3I0 505 aaKnown RBP24.37■■□□□ 1.49
CTDSP2-207ENST00000551594 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.36■■□□□ 1.49
CTDSP2-207ENST00000551594 NECTIN2Q92692 538 aa24.36■■□□□ 1.49
CTDSP2-207ENST00000551594 MSH5O43196 834 aa24.35■■□□□ 1.49
CTDSP2-207ENST00000551594 TSPYL6Q8N831 410 aa24.35■■□□□ 1.49
CTDSP2-207ENST00000551594 MYH16Q9H6N6 1097 aa24.35■■□□□ 1.49
CTDSP2-207ENST00000551594 NBPF26B4DH59 902 aa24.34■■□□□ 1.49
CTDSP2-207ENST00000551594 SSFA2P28290 1259 aa24.34■■□□□ 1.49
CTDSP2-207ENST00000551594 NBPF10Q6P3W6 841 aaKnown RBP24.34■■□□□ 1.49
CTDSP2-207ENST00000551594 NBPF15Q8N660 670 aa24.34■■□□□ 1.49
CTDSP2-207ENST00000551594 CASZ1Q86V15 1759 aa24.34■■□□□ 1.49
CTDSP2-207ENST00000551594 SOS1Q07889 1333 aaPredicted RBP24.34■■□□□ 1.49
CTDSP2-207ENST00000551594 EXOSC9Q06265 439 aaKnown RBP24.33■■□□□ 1.49
CTDSP2-207ENST00000551594 SLFN5Q08AF3 891 aa24.33■■□□□ 1.49
CTDSP2-207ENST00000551594 TRAPPC3LQ5T215 181 aa24.33■■□□□ 1.49
CTDSP2-207ENST00000551594 ARHGEF1Q92888 912 aaKnown RBP24.33■■□□□ 1.49
CTDSP2-207ENST00000551594 E9PSI1 815 aa24.32■■□□□ 1.48
CTDSP2-207ENST00000551594 FLAD1Q8NFF5 587 aa24.32■■□□□ 1.48
CTDSP2-207ENST00000551594 ZNF330Q9Y3S2 320 aaPredicted RBP24.32■■□□□ 1.48
CTDSP2-207ENST00000551594 ZBTB7AO95365 584 aa24.3■■□□□ 1.48
CTDSP2-207ENST00000551594 HOXB7P09629 217 aa24.3■■□□□ 1.48
CTDSP2-207ENST00000551594 EIF5P55010 431 aaKnown RBP24.3■■□□□ 1.48
CTDSP2-207ENST00000551594 HDGFL1Q5TGJ6 251 aa24.3■■□□□ 1.48
CTDSP2-207ENST00000551594 ANXA1P04083 346 aa24.29■■□□□ 1.48
CTDSP2-207ENST00000551594 MYL6BP14649 208 aa24.29■■□□□ 1.48
CTDSP2-207ENST00000551594 IL6STP40189 918 aaPredicted RBP24.29■■□□□ 1.48
CTDSP2-207ENST00000551594 C4AP0C0L4 1744 aa24.29■■□□□ 1.48
CTDSP2-207ENST00000551594 COL15A1P39059 1388 aa24.29■■□□□ 1.48
CTDSP2-207ENST00000551594 ADRA2BP18089 450 aa24.28■■□□□ 1.48
CTDSP2-207ENST00000551594 PDIA6Q15084 440 aa24.28■■□□□ 1.48
CTDSP2-207ENST00000551594 PROSER3Q2NL68 480 aa24.28■■□□□ 1.48
CTDSP2-207ENST00000551594 TWISTNBQ3B726 338 aaPredicted RBP24.28■■□□□ 1.48
CTDSP2-207ENST00000551594 SRP68Q9UHB9 627 aaKnown RBP24.28■■□□□ 1.48
CTDSP2-207ENST00000551594 RFC4P35249 363 aa24.27■■□□□ 1.48
CTDSP2-207ENST00000551594 TRMT2AQ8IZ69 625 aaKnown RBP24.27■■□□□ 1.48
CTDSP2-207ENST00000551594 ZBED9Q6R2W3 1325 aa24.27■■□□□ 1.48
CTDSP2-207ENST00000551594 ARXQ96QS3 562 aa24.26■■□□□ 1.47
CTDSP2-207ENST00000551594 CHPF2Q9P2E5 772 aa24.26■■□□□ 1.47
CTDSP2-207ENST00000551594 ATF5Q9Y2D1 282 aaPredicted RBP24.26■■□□□ 1.47
CTDSP2-207ENST00000551594 TCERG1O14776 1098 aaKnown RBP24.25■■□□□ 1.47
CTDSP2-207ENST00000551594 MSL1Q68DK7 614 aa24.25■■□□□ 1.47
CTDSP2-207ENST00000551594 TBC1D2BQ9UPU7 963 aa24.25■■□□□ 1.47
CTDSP2-207ENST00000551594 VAMP4O75379 141 aa24.24■■□□□ 1.47
CTDSP2-207ENST00000551594 ERBB4Q15303 1308 aa24.24■■□□□ 1.47
CTDSP2-207ENST00000551594 A0A087WZG4 1122 aa24.23■■□□□ 1.47
CTDSP2-207ENST00000551594 LRP10Q7Z4F1 713 aa24.23■■□□□ 1.47
CTDSP2-207ENST00000551594 NPM2Q86SE8 214 aaKnown RBP24.23■■□□□ 1.47
CTDSP2-207ENST00000551594 SLC16A10Q8TF71 515 aa24.23■■□□□ 1.47
CTDSP2-207ENST00000551594 YTHDC1Q96MU7 727 aaKnown RBP24.23■■□□□ 1.47
CTDSP2-207ENST00000551594 USP42Q9H9J4 1324 aaKnown RBP24.22■■□□□ 1.47
CTDSP2-207ENST00000551594 USPL1Q5W0Q7 1092 aa24.22■■□□□ 1.47
CTDSP2-207ENST00000551594 MTFR1LQ9H019 292 aa24.22■■□□□ 1.47
CTDSP2-207ENST00000551594 DDX21Q9NR30 783 aaKnown RBP eCLIP24.22■■□□□ 1.47
CTDSP2-207ENST00000551594 NARFQ9UHQ1 456 aa24.22■■□□□ 1.47
CTDSP2-207ENST00000551594 ZPR1O75312 459 aa24.21■■□□□ 1.47
CTDSP2-207ENST00000551594 GYS1P13807 737 aa24.21■■□□□ 1.47
CTDSP2-207ENST00000551594 TTLL7Q6ZT98 887 aa24.21■■□□□ 1.47
CTDSP2-207ENST00000551594 DZIP3Q86Y13 1208 aaKnown RBP24.21■■□□□ 1.47
CTDSP2-207ENST00000551594 DBF4Q9UBU7 674 aaPredicted RBP24.21■■□□□ 1.47
CTDSP2-207ENST00000551594 CCDC30Q5VVM6 783 aa24.2■■□□□ 1.46
CTDSP2-207ENST00000551594 BCL2L12Q9HB09 334 aa24.2■■□□□ 1.46
CTDSP2-207ENST00000551594 FKBP8Q14318 412 aa24.19■■□□□ 1.46
CTDSP2-207ENST00000551594 CAMTA2O94983 1202 aa24.18■■□□□ 1.46
CTDSP2-207ENST00000551594 AIMP1Q12904 312 aaKnown RBP24.18■■□□□ 1.46
CTDSP2-207ENST00000551594 XAGE3Q8WTP9 111 aa24.18■■□□□ 1.46
CTDSP2-207ENST00000551594 COPS6Q7L5N1 327 aa24.17■■□□□ 1.46
CTDSP2-207ENST00000551594 PHAXQ9H814 394 aaKnown RBP24.17■■□□□ 1.46
CTDSP2-207ENST00000551594 SPON1Q9HCB6 807 aa24.17■■□□□ 1.46
CTDSP2-207ENST00000551594 PTGER2P43116 358 aa24.16■■□□□ 1.46
CTDSP2-207ENST00000551594 HYPKQ9NX55 129 aa24.16■■□□□ 1.46
CTDSP2-207ENST00000551594 HLFQ16534 295 aa24.15■■□□□ 1.46
CTDSP2-207ENST00000551594 STK31Q9BXU1 1019 aa24.15■■□□□ 1.46
CTDSP2-207ENST00000551594 CHMP4AQ9BY43 222 aa24.15■■□□□ 1.46
CTDSP2-207ENST00000551594 BCORQ6W2J9 1755 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms