RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 MSL1Q68DK7 614 aa20.28■□□□□ 0.84
PRPF40B-211ENST00000551063 MYH14Q7Z406 1995 aaKnown RBP20.28■□□□□ 0.84
PRPF40B-211ENST00000551063 SOS1Q07889 1333 aaPredicted RBP20.27■□□□□ 0.84
PRPF40B-211ENST00000551063 THUMPD2Q9BTF0 503 aaKnown RBP20.27■□□□□ 0.84
PRPF40B-211ENST00000551063 MRS2Q9HD23 443 aa20.27■□□□□ 0.84
PRPF40B-211ENST00000551063 ZBTB1Q9Y2K1 713 aa20.27■□□□□ 0.84
PRPF40B-211ENST00000551063 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.84
PRPF40B-211ENST00000551063 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
PRPF40B-211ENST00000551063 RFC4P35249 363 aa20.26■□□□□ 0.83
PRPF40B-211ENST00000551063 ZNF784Q8NCA9 323 aaPredicted RBP20.26■□□□□ 0.83
PRPF40B-211ENST00000551063 SNRPA1P09661 255 aaKnown RBP20.25■□□□□ 0.83
PRPF40B-211ENST00000551063 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
PRPF40B-211ENST00000551063 BABAM1Q9NWV8 329 aa20.25■□□□□ 0.83
PRPF40B-211ENST00000551063 COL15A1P39059 1388 aa20.24■□□□□ 0.83
PRPF40B-211ENST00000551063 NLGN1Q8N2Q7 840 aa20.24■□□□□ 0.83
PRPF40B-211ENST00000551063 USP42Q9H9J4 1324 aaKnown RBP20.24■□□□□ 0.83
PRPF40B-211ENST00000551063 GYS1P13807 737 aa20.23■□□□□ 0.83
PRPF40B-211ENST00000551063 NEUROD2Q15784 382 aa20.23■□□□□ 0.83
PRPF40B-211ENST00000551063 NLGN2Q8NFZ4 835 aa20.23■□□□□ 0.83
PRPF40B-211ENST00000551063 MIS18AQ9NYP9 233 aa20.23■□□□□ 0.83
PRPF40B-211ENST00000551063 TRIM35Q9UPQ4 493 aa20.23■□□□□ 0.83
PRPF40B-211ENST00000551063 CHD4Q14839 1912 aa20.21■□□□□ 0.83
PRPF40B-211ENST00000551063 APAF1O14727 1248 aa20.21■□□□□ 0.83
PRPF40B-211ENST00000551063 GRIN3BO60391 1043 aa20.21■□□□□ 0.83
PRPF40B-211ENST00000551063 CANXP27824 592 aaKnown RBP20.21■□□□□ 0.83
PRPF40B-211ENST00000551063 IL6STP40189 918 aaPredicted RBP20.21■□□□□ 0.83
PRPF40B-211ENST00000551063 EIF5P55010 431 aaKnown RBP20.21■□□□□ 0.83
PRPF40B-211ENST00000551063 EIF4A1P60842 406 aaKnown RBP20.21■□□□□ 0.83
PRPF40B-211ENST00000551063 TSPYL4Q9UJ04 414 aa20.21■□□□□ 0.83
PRPF40B-211ENST00000551063 CD2APQ9Y5K6 639 aa20.21■□□□□ 0.83
PRPF40B-211ENST00000551063 KDM3BQ7LBC6 1761 aa20.21■□□□□ 0.83
PRPF40B-211ENST00000551063 C4AP0C0L4 1744 aa20.2■□□□□ 0.82
PRPF40B-211ENST00000551063 A0A087WZG4 1122 aa20.2■□□□□ 0.82
PRPF40B-211ENST00000551063 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
PRPF40B-211ENST00000551063 SRP68Q9UHB9 627 aaKnown RBP20.19■□□□□ 0.82
PRPF40B-211ENST00000551063 NARFQ9UHQ1 456 aa20.19■□□□□ 0.82
PRPF40B-211ENST00000551063 PRAMEF22A3QJZ6 481 aa20.18■□□□□ 0.82
PRPF40B-211ENST00000551063 ZPR1O75312 459 aa20.18■□□□□ 0.82
PRPF40B-211ENST00000551063 GIGYF1O75420 1035 aaPredicted RBP20.18■□□□□ 0.82
PRPF40B-211ENST00000551063 MMP10P09238 476 aa20.18■□□□□ 0.82
PRPF40B-211ENST00000551063 A1BGP04217 495 aa20.17■□□□□ 0.82
PRPF40B-211ENST00000551063 UTRNP46939 3433 aa20.16■□□□□ 0.82
PRPF40B-211ENST00000551063 CHL1O00533 1208 aa20.16■□□□□ 0.82
PRPF40B-211ENST00000551063 CALD1Q05682 793 aaKnown RBP20.16■□□□□ 0.82
PRPF40B-211ENST00000551063 USPL1Q5W0Q7 1092 aa20.16■□□□□ 0.82
PRPF40B-211ENST00000551063 NPM2Q86SE8 214 aaKnown RBP20.16■□□□□ 0.82
PRPF40B-211ENST00000551063 FKBP8Q14318 412 aa20.15■□□□□ 0.82
PRPF40B-211ENST00000551063 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
PRPF40B-211ENST00000551063 YBX3P16989 372 aaKnown RBP eCLIP20.14■□□□□ 0.81
PRPF40B-211ENST00000551063 ZNF330Q9Y3S2 320 aaPredicted RBP20.14■□□□□ 0.81
PRPF40B-211ENST00000551063 LAMB4A4D0S4 1761 aa20.13■□□□□ 0.81
PRPF40B-211ENST00000551063 CCDC27Q2M243 656 aa20.13■□□□□ 0.81
PRPF40B-211ENST00000551063 CFAP44Q96MT7 982 aa20.13■□□□□ 0.81
PRPF40B-211ENST00000551063 BCL2L12Q9HB09 334 aa20.13■□□□□ 0.81
PRPF40B-211ENST00000551063 PARP3Q9Y6F1 533 aa20.13■□□□□ 0.81
PRPF40B-211ENST00000551063 ERBB4Q15303 1308 aa20.12■□□□□ 0.81
PRPF40B-211ENST00000551063 NBPF26B4DH59 902 aa20.12■□□□□ 0.81
PRPF40B-211ENST00000551063 NBPF10Q6P3W6 841 aaKnown RBP20.12■□□□□ 0.81
PRPF40B-211ENST00000551063 NBPF15Q8N660 670 aa20.12■□□□□ 0.81
PRPF40B-211ENST00000551063 IFT57Q9NWB7 429 aa20.12■□□□□ 0.81
PRPF40B-211ENST00000551063 C10orf71Q711Q0 1435 aa20.11■□□□□ 0.81
PRPF40B-211ENST00000551063 DDR1Q08345 913 aa20.11■□□□□ 0.81
PRPF40B-211ENST00000551063 RGL2O15211 777 aa20.1■□□□□ 0.81
PRPF40B-211ENST00000551063 ZNF853P0CG23 659 aa20.1■□□□□ 0.81
PRPF40B-211ENST00000551063 TM4SF1P30408 202 aa20.1■□□□□ 0.81
PRPF40B-211ENST00000551063 PIP4K2AP48426 406 aaPredicted RBP20.1■□□□□ 0.81
PRPF40B-211ENST00000551063 GNAI1P63096 354 aa20.1■□□□□ 0.81
PRPF40B-211ENST00000551063 DZIP3Q86Y13 1208 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-211ENST00000551063 TBC1D2BQ9UPU7 963 aa20.1■□□□□ 0.81
PRPF40B-211ENST00000551063 LAS1LQ9Y4W2 734 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-211ENST00000551063 SCN7AQ01118 1682 aa20.1■□□□□ 0.81
PRPF40B-211ENST00000551063 POLRMTO00411 1230 aaKnown RBP20.09■□□□□ 0.81
PRPF40B-211ENST00000551063 CAMTA2O94983 1202 aa20.09■□□□□ 0.81
PRPF40B-211ENST00000551063 NFIXQ14938 502 aa20.09■□□□□ 0.81
PRPF40B-211ENST00000551063 HOXB7P09629 217 aa20.08■□□□□ 0.81
PRPF40B-211ENST00000551063 MBIPQ9NS73 344 aa20.08■□□□□ 0.81
PRPF40B-211ENST00000551063 C1QTNF8P60827 252 aa20.07■□□□□ 0.8
PRPF40B-211ENST00000551063 FAM9BQ8IZU0 186 aa20.07■□□□□ 0.8
PRPF40B-211ENST00000551063 CLEC4GQ6UXB4 293 aa20.06■□□□□ 0.8
PRPF40B-211ENST00000551063 WWC1Q8IX03 1113 aa20.06■□□□□ 0.8
PRPF40B-211ENST00000551063 ZNF652Q9Y2D9 606 aa20.06■□□□□ 0.8
PRPF40B-211ENST00000551063 CCER2I3L3R5 266 aa20.05■□□□□ 0.8
PRPF40B-211ENST00000551063 TGFB2P61812 414 aa20.05■□□□□ 0.8
PRPF40B-211ENST00000551063 NGEFQ8N5V2 710 aa20.05■□□□□ 0.8
PRPF40B-211ENST00000551063 KRT24Q2M2I5 525 aa20.04■□□□□ 0.8
PRPF40B-211ENST00000551063 TBC1D9BQ66K14 1250 aa20.04■□□□□ 0.8
PRPF40B-211ENST00000551063 CARMIL3Q8ND23 1372 aa20.04■□□□□ 0.8
PRPF40B-211ENST00000551063 PXDNLA1KZ92 1463 aa20.04■□□□□ 0.8
PRPF40B-211ENST00000551063 IL16Q14005 1332 aa20.03■□□□□ 0.8
PRPF40B-211ENST00000551063 SERPINB2P05120 415 aa20.03■□□□□ 0.8
PRPF40B-211ENST00000551063 EIF2S2P20042 333 aaKnown RBP20.03■□□□□ 0.8
PRPF40B-211ENST00000551063 BCORQ6W2J9 1755 aa20.03■□□□□ 0.8
PRPF40B-211ENST00000551063 KIF13BQ9NQT8 1826 aa20.02■□□□□ 0.8
PRPF40B-211ENST00000551063 MYL6BP14649 208 aa20.02■□□□□ 0.8
PRPF40B-211ENST00000551063 PDIA6Q15084 440 aa20.02■□□□□ 0.8
PRPF40B-211ENST00000551063 BICDL1Q6ZP65 573 aa20.02■□□□□ 0.8
PRPF40B-211ENST00000551063 LRP10Q7Z4F1 713 aa20.02■□□□□ 0.8
PRPF40B-211ENST00000551063 ERVV-1B6SEH8 477 aa20.01■□□□□ 0.79
PRPF40B-211ENST00000551063 HDGFL1Q5TGJ6 251 aa20.01■□□□□ 0.79
PRPF40B-211ENST00000551063 DUSP27Q5VZP5 1158 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 303.7 ms