RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 LMO7Q8WWI1 1683 aa9.75□□□□□ -0.85
KRR1-204ENST00000550898 C11orf95C9JLR9 678 aaPredicted RBP9.75□□□□□ -0.85
KRR1-204ENST00000550898 CSB-PGBD3P0DP91 1061 aa9.75□□□□□ -0.85
KRR1-204ENST00000550898 LARP1Q6PKG0 1096 aaKnown RBP9.75□□□□□ -0.85
KRR1-204ENST00000550898 PANK3Q9H999 370 aa9.75□□□□□ -0.85
KRR1-204ENST00000550898 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.75□□□□□ -0.85
KRR1-204ENST00000550898 CRB1P82279 1406 aa9.74□□□□□ -0.85
KRR1-204ENST00000550898 TOM1L2Q6ZVM7 507 aa9.74□□□□□ -0.85
KRR1-204ENST00000550898 SEPT12Q8IYM1 358 aa9.74□□□□□ -0.85
KRR1-204ENST00000550898 TCP11L2Q8N4U5 519 aa9.74□□□□□ -0.85
KRR1-204ENST00000550898 USP35Q9P2H5 1018 aa9.74□□□□□ -0.85
KRR1-204ENST00000550898 THRAP3Q9Y2W1 955 aaKnown RBP9.74□□□□□ -0.85
KRR1-204ENST00000550898 WDR17Q8IZU2 1322 aa9.74□□□□□ -0.85
KRR1-204ENST00000550898 RTL1A6NKG5 1358 aa9.74□□□□□ -0.85
KRR1-204ENST00000550898 NSD2O96028 1365 aa9.74□□□□□ -0.85
KRR1-204ENST00000550898 CCDC7Q96M83 1385 aa9.74□□□□□ -0.85
KRR1-204ENST00000550898 BLMP54132 1417 aaPredicted RBP9.73□□□□□ -0.85
KRR1-204ENST00000550898 RGS20O76081 388 aa9.73□□□□□ -0.85
KRR1-204ENST00000550898 ZEB1P37275 1124 aaPredicted RBP9.73□□□□□ -0.85
KRR1-204ENST00000550898 AMPHP49418 695 aa9.73□□□□□ -0.85
KRR1-204ENST00000550898 PRSS12P56730 875 aa9.73□□□□□ -0.85
KRR1-204ENST00000550898 BARGINQ6ZT62 677 aa9.73□□□□□ -0.85
KRR1-204ENST00000550898 TSR3Q9UJK0 312 aaKnown RBP9.73□□□□□ -0.85
KRR1-204ENST00000550898 MAP3K19Q56UN5 1328 aa9.73□□□□□ -0.85
KRR1-204ENST00000550898 SAMD7Q7Z3H4 446 aa9.72□□□□□ -0.85
KRR1-204ENST00000550898 IP6K1Q92551 441 aa9.72□□□□□ -0.85
KRR1-204ENST00000550898 LRCH3Q96II8 777 aa9.72□□□□□ -0.85
KRR1-204ENST00000550898 KNSTRNQ9Y448 316 aa9.72□□□□□ -0.85
KRR1-204ENST00000550898 HOXC9P31274 260 aa9.71□□□□□ -0.86
KRR1-204ENST00000550898 KRT27Q7Z3Y8 459 aa9.71□□□□□ -0.86
KRR1-204ENST00000550898 PACS2Q86VP3 889 aa9.71□□□□□ -0.86
KRR1-204ENST00000550898 ANKRD24Q8TF21 1146 aa9.71□□□□□ -0.86
KRR1-204ENST00000550898 CARD10Q9BWT7 1032 aa9.71□□□□□ -0.86
KRR1-204ENST00000550898 WASHC2AQ641Q2 1341 aa9.71□□□□□ -0.86
KRR1-204ENST00000550898 KIF24Q5T7B8 1368 aa9.71□□□□□ -0.86
KRR1-204ENST00000550898 RRS1Q15050 365 aaKnown RBP9.7□□□□□ -0.86
KRR1-204ENST00000550898 CDCA7Q9BWT1 371 aaPredicted RBP9.7□□□□□ -0.86
KRR1-204ENST00000550898 NPDC1Q9NQX5 325 aaPredicted RBP9.7□□□□□ -0.86
KRR1-204ENST00000550898 FLT4P35916 1363 aa9.7□□□□□ -0.86
KRR1-204ENST00000550898 SMG6Q86US8 1419 aaKnown RBP9.7□□□□□ -0.86
KRR1-204ENST00000550898 NYAP1Q6ZVC0 841 aa9.69□□□□□ -0.86
KRR1-204ENST00000550898 TATDN2Q93075 761 aa9.69□□□□□ -0.86
KRR1-204ENST00000550898 NLRP2Q9NX02 1062 aa9.69□□□□□ -0.86
KRR1-204ENST00000550898 COL18A1P39060 1754 aa9.68□□□□□ -0.86
KRR1-204ENST00000550898 THSD7AQ9UPZ6 1657 aa9.68□□□□□ -0.86
KRR1-204ENST00000550898 FBLN1P23142 703 aa9.68□□□□□ -0.86
KRR1-204ENST00000550898 KCNC4Q03721 635 aa9.68□□□□□ -0.86
KRR1-204ENST00000550898 PDE3BQ13370 1112 aa9.68□□□□□ -0.86
KRR1-204ENST00000550898 MORC1Q86VD1 984 aa9.68□□□□□ -0.86
KRR1-204ENST00000550898 LTV1Q96GA3 475 aaPredicted RBP9.68□□□□□ -0.86
KRR1-204ENST00000550898 IRX2Q9BZI1 471 aaPredicted RBP9.68□□□□□ -0.86
KRR1-204ENST00000550898 KIF20BQ96Q89 1820 aa9.68□□□□□ -0.86
KRR1-204ENST00000550898 INSRP06213 1382 aa9.67□□□□□ -0.86
KRR1-204ENST00000550898 PPM1GO15355 546 aaPredicted RBP9.67□□□□□ -0.86
KRR1-204ENST00000550898 TJAP1Q5JTD0 557 aa9.67□□□□□ -0.86
KRR1-204ENST00000550898 PNMA3Q9UL41 463 aa9.67□□□□□ -0.86
KRR1-204ENST00000550898 IL2RBP14784 551 aa9.66□□□□□ -0.86
KRR1-204ENST00000550898 TNNT2P45379 298 aaPredicted RBP9.66□□□□□ -0.86
KRR1-204ENST00000550898 SF3B2Q13435 895 aaKnown RBP9.66□□□□□ -0.86
KRR1-204ENST00000550898 DDB1Q16531 1140 aa9.66□□□□□ -0.86
KRR1-204ENST00000550898 NUDT18Q6ZVK8 323 aa9.66□□□□□ -0.86
KRR1-204ENST00000550898 CCDC125Q86Z20 511 aa9.66□□□□□ -0.86
KRR1-204ENST00000550898 TTC13Q8NBP0 860 aa9.66□□□□□ -0.86
KRR1-204ENST00000550898 EMILIN1Q9Y6C2 1016 aa9.66□□□□□ -0.86
KRR1-204ENST00000550898 DISP2A7MBM2 1401 aa9.65□□□□□ -0.86
KRR1-204ENST00000550898 NPC1L1Q9UHC9 1359 aa9.65□□□□□ -0.86
KRR1-204ENST00000550898 MLLT3P42568 568 aaPredicted RBP9.65□□□□□ -0.86
KRR1-204ENST00000550898 HSP90AB2PQ58FF8 381 aa9.65□□□□□ -0.86
KRR1-204ENST00000550898 FAM196AQ6ZSG2 479 aa9.65□□□□□ -0.86
KRR1-204ENST00000550898 POLKQ9UBT6 870 aa9.65□□□□□ -0.86
KRR1-204ENST00000550898 LTN1O94822 1766 aa9.65□□□□□ -0.87
KRR1-204ENST00000550898 OVOS2A0A0G2JMS6 1433 aa9.65□□□□□ -0.87
KRR1-204ENST00000550898 TNS2Q63HR2 1409 aa9.65□□□□□ -0.87
KRR1-204ENST00000550898 EXOC5O00471 708 aa9.64□□□□□ -0.87
KRR1-204ENST00000550898 PER1O15534 1290 aaPredicted RBP9.64□□□□□ -0.87
KRR1-204ENST00000550898 PPP4CP60510 307 aa9.64□□□□□ -0.87
KRR1-204ENST00000550898 CC2D1BQ5T0F9 858 aaKnown RBP9.63□□□□□ -0.87
KRR1-204ENST00000550898 FAM182BQ5T319 152 aa9.63□□□□□ -0.87
KRR1-204ENST00000550898 PADI6Q6TGC4 694 aa9.63□□□□□ -0.87
KRR1-204ENST00000550898 LRRC37A3O60309 1634 aa9.63□□□□□ -0.87
KRR1-204ENST00000550898 PARP4Q9UKK3 1724 aaKnown RBP9.62□□□□□ -0.87
KRR1-204ENST00000550898 FAM208AQ9UK61 1670 aaKnown RBP9.62□□□□□ -0.87
KRR1-204ENST00000550898 APLP1P51693 650 aa9.62□□□□□ -0.87
KRR1-204ENST00000550898 NBPF6Q5VWK0 638 aa9.62□□□□□ -0.87
KRR1-204ENST00000550898 RAPGEF4Q8WZA2 1011 aa9.62□□□□□ -0.87
KRR1-204ENST00000550898 ZNF516Q92618 1163 aa9.62□□□□□ -0.87
KRR1-204ENST00000550898 NBPF4Q96M43 638 aa9.62□□□□□ -0.87
KRR1-204ENST00000550898 ANKRD26Q9UPS8 1709 aa9.62□□□□□ -0.87
KRR1-204ENST00000550898 LCE2BO14633 110 aa9.61□□□□□ -0.87
KRR1-204ENST00000550898 BAG6P46379 1132 aa9.61□□□□□ -0.87
KRR1-204ENST00000550898 MTRQ99707 1265 aa9.61□□□□□ -0.87
KRR1-204ENST00000550898 PEAK1Q9H792 1746 aa9.61□□□□□ -0.87
KRR1-204ENST00000550898 BCL9O00512 1426 aa9.6□□□□□ -0.87
KRR1-204ENST00000550898 NBPF26B4DH59 902 aa9.6□□□□□ -0.87
KRR1-204ENST00000550898 TATP17735 454 aaPredicted RBP9.6□□□□□ -0.87
KRR1-204ENST00000550898 CNGB1Q14028 1251 aaPredicted RBP9.6□□□□□ -0.87
KRR1-204ENST00000550898 EIF4A2Q14240 407 aaKnown RBP9.6□□□□□ -0.87
KRR1-204ENST00000550898 USHBP1Q8N6Y0 703 aa9.6□□□□□ -0.87
KRR1-204ENST00000550898 KCNV2Q8TDN2 545 aa9.6□□□□□ -0.87
KRR1-204ENST00000550898 TRIM37O94972 964 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms