RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 C4AP0C0L4 1744 aa14.8□□□□□ -0.04
RAB5B-208ENST00000550283 RPS6KA4O75676 772 aa14.8□□□□□ -0.04
RAB5B-208ENST00000550283 ARHGEF1Q92888 912 aaKnown RBP14.8□□□□□ -0.04
RAB5B-208ENST00000550283 A1BGP04217 495 aa14.79□□□□□ -0.04
RAB5B-208ENST00000550283 NEFMP07197 916 aa14.79□□□□□ -0.04
RAB5B-208ENST00000550283 SSFA2P28290 1259 aa14.79□□□□□ -0.04
RAB5B-208ENST00000550283 KRT24Q2M2I5 525 aa14.79□□□□□ -0.04
RAB5B-208ENST00000550283 TTC5Q8N0Z6 440 aa14.79□□□□□ -0.04
RAB5B-208ENST00000550283 PNNQ9H307 717 aaKnown RBP14.79□□□□□ -0.04
RAB5B-208ENST00000550283 CCDC87Q9NVE4 849 aa14.79□□□□□ -0.04
RAB5B-208ENST00000550283 SOS1Q07889 1333 aaPredicted RBP14.78□□□□□ -0.04
RAB5B-208ENST00000550283 EIF4A1P60842 406 aaKnown RBP14.78□□□□□ -0.04
RAB5B-208ENST00000550283 VSIG10Q8N0Z9 540 aa14.78□□□□□ -0.04
RAB5B-208ENST00000550283 FMNL2Q96PY5 1086 aa14.78□□□□□ -0.04
RAB5B-208ENST00000550283 CANXP27824 592 aaKnown RBP14.77□□□□□ -0.05
RAB5B-208ENST00000550283 RTCBQ9Y3I0 505 aaKnown RBP14.77□□□□□ -0.05
RAB5B-208ENST00000550283 NBPF26B4DH59 902 aa14.76□□□□□ -0.05
RAB5B-208ENST00000550283 GYS1P13807 737 aa14.76□□□□□ -0.05
RAB5B-208ENST00000550283 NBPF10Q6P3W6 841 aaKnown RBP14.76□□□□□ -0.05
RAB5B-208ENST00000550283 FAM9BQ8IZU0 186 aa14.76□□□□□ -0.05
RAB5B-208ENST00000550283 NBPF15Q8N660 670 aa14.76□□□□□ -0.05
RAB5B-208ENST00000550283 SLC16A10Q8TF71 515 aa14.76□□□□□ -0.05
RAB5B-208ENST00000550283 TRAPPC3LQ5T215 181 aa14.75□□□□□ -0.05
RAB5B-208ENST00000550283 BCL2L12Q9HB09 334 aa14.75□□□□□ -0.05
RAB5B-208ENST00000550283 CHL1O00533 1208 aa14.74□□□□□ -0.05
RAB5B-208ENST00000550283 GIGYF1O75420 1035 aaPredicted RBP14.74□□□□□ -0.05
RAB5B-208ENST00000550283 FLAD1Q8NFF5 587 aa14.74□□□□□ -0.05
RAB5B-208ENST00000550283 ARXQ96QS3 562 aa14.74□□□□□ -0.05
RAB5B-208ENST00000550283 FHDC1Q9C0D6 1143 aaPredicted RBP14.74□□□□□ -0.05
RAB5B-208ENST00000550283 TSPYL4Q9UJ04 414 aa14.74□□□□□ -0.05
RAB5B-208ENST00000550283 COL15A1P39059 1388 aa14.73□□□□□ -0.05
RAB5B-208ENST00000550283 USP42Q9H9J4 1324 aaKnown RBP14.73□□□□□ -0.05
RAB5B-208ENST00000550283 SNRPA1P09661 255 aaKnown RBP14.73□□□□□ -0.05
RAB5B-208ENST00000550283 ZNF853P0CG23 659 aa14.73□□□□□ -0.05
RAB5B-208ENST00000550283 EIF5P55010 431 aaKnown RBP14.73□□□□□ -0.05
RAB5B-208ENST00000550283 FKBP8Q14318 412 aa14.73□□□□□ -0.05
RAB5B-208ENST00000550283 MIER1Q8N108 512 aa14.73□□□□□ -0.05
RAB5B-208ENST00000550283 SALL2Q9Y467 1007 aaPredicted RBP14.73□□□□□ -0.05
RAB5B-208ENST00000550283 LAS1LQ9Y4W2 734 aaKnown RBP14.73□□□□□ -0.05
RAB5B-208ENST00000550283 USPL1Q5W0Q7 1092 aa14.72□□□□□ -0.05
RAB5B-208ENST00000550283 NLGN2Q8NFZ4 835 aa14.72□□□□□ -0.05
RAB5B-208ENST00000550283 PPP1R1BQ9UD71 204 aaPredicted RBP14.72□□□□□ -0.05
RAB5B-208ENST00000550283 LAMB4A4D0S4 1761 aa14.71□□□□□ -0.05
RAB5B-208ENST00000550283 STARD3NLO95772 234 aa14.71□□□□□ -0.05
RAB5B-208ENST00000550283 RFC4P35249 363 aa14.71□□□□□ -0.05
RAB5B-208ENST00000550283 DDR1Q08345 913 aa14.71□□□□□ -0.05
RAB5B-208ENST00000550283 LMOD3Q0VAK6 560 aa14.71□□□□□ -0.05
RAB5B-208ENST00000550283 MBIPQ9NS73 344 aa14.71□□□□□ -0.05
RAB5B-208ENST00000550283 TBC1D2BQ9UPU7 963 aa14.71□□□□□ -0.05
RAB5B-208ENST00000550283 MMP10P09238 476 aa14.7□□□□□ -0.06
RAB5B-208ENST00000550283 PROSER3Q2NL68 480 aa14.7□□□□□ -0.06
RAB5B-208ENST00000550283 DIEXFQ68CQ4 756 aaKnown RBP14.7□□□□□ -0.06
RAB5B-208ENST00000550283 SYT17Q9BSW7 474 aa14.7□□□□□ -0.06
RAB5B-208ENST00000550283 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
RAB5B-208ENST00000550283 ZNF330Q9Y3S2 320 aaPredicted RBP14.7□□□□□ -0.06
RAB5B-208ENST00000550283 ANXA1P04083 346 aa14.69□□□□□ -0.06
RAB5B-208ENST00000550283 PDIA6Q15084 440 aa14.69□□□□□ -0.06
RAB5B-208ENST00000550283 LRP10Q7Z4F1 713 aa14.69□□□□□ -0.06
RAB5B-208ENST00000550283 WWC1Q8IX03 1113 aa14.69□□□□□ -0.06
RAB5B-208ENST00000550283 NECTIN2Q92692 538 aa14.69□□□□□ -0.06
RAB5B-208ENST00000550283 TEX13AQ9BXU3 409 aaPredicted RBP14.69□□□□□ -0.06
RAB5B-208ENST00000550283 CAMTA2O94983 1202 aa14.68□□□□□ -0.06
RAB5B-208ENST00000550283 KLHL34Q8N239 644 aa14.68□□□□□ -0.06
RAB5B-208ENST00000550283 TSR2Q969E8 191 aaKnown RBP14.68□□□□□ -0.06
RAB5B-208ENST00000550283 CFAP44Q96MT7 982 aa14.68□□□□□ -0.06
RAB5B-208ENST00000550283 NARFQ9UHQ1 456 aa14.68□□□□□ -0.06
RAB5B-208ENST00000550283 SCN7AQ01118 1682 aa14.68□□□□□ -0.06
RAB5B-208ENST00000550283 POLD1P28340 1107 aa14.67□□□□□ -0.06
RAB5B-208ENST00000550283 TM4SF1P30408 202 aa14.67□□□□□ -0.06
RAB5B-208ENST00000550283 IL6STP40189 918 aaPredicted RBP14.67□□□□□ -0.06
RAB5B-208ENST00000550283 ZNF784Q8NCA9 323 aaPredicted RBP14.67□□□□□ -0.06
RAB5B-208ENST00000550283 RNF216Q9NWF9 866 aaPredicted RBP14.67□□□□□ -0.06
RAB5B-208ENST00000550283 EIF2S2P20042 333 aaKnown RBP14.66□□□□□ -0.06
RAB5B-208ENST00000550283 NFIXQ14938 502 aa14.66□□□□□ -0.06
RAB5B-208ENST00000550283 CCDC27Q2M243 656 aa14.66□□□□□ -0.06
RAB5B-208ENST00000550283 TTLL7Q6ZT98 887 aa14.66□□□□□ -0.06
RAB5B-208ENST00000550283 NGEFQ8N5V2 710 aa14.66□□□□□ -0.06
RAB5B-208ENST00000550283 TSPYL6Q8N831 410 aa14.66□□□□□ -0.06
RAB5B-208ENST00000550283 C8orf58Q8NAV2 365 aa14.66□□□□□ -0.06
RAB5B-208ENST00000550283 BABAM1Q9NWV8 329 aa14.66□□□□□ -0.06
RAB5B-208ENST00000550283 KIAA1551Q9HCM1 1747 aa14.66□□□□□ -0.06
RAB5B-208ENST00000550283 GOLGB1Q14789 3259 aaKnown RBP14.65□□□□□ -0.06
RAB5B-208ENST00000550283 BCORQ6W2J9 1755 aa14.65□□□□□ -0.06
RAB5B-208ENST00000550283 CCER2I3L3R5 266 aa14.65□□□□□ -0.06
RAB5B-208ENST00000550283 POLRMTO00411 1230 aaKnown RBP14.65□□□□□ -0.06
RAB5B-208ENST00000550283 MYL6BP14649 208 aa14.65□□□□□ -0.06
RAB5B-208ENST00000550283 HMGB2P26583 209 aaKnown RBP14.65□□□□□ -0.06
RAB5B-208ENST00000550283 C1QTNF8P60827 252 aa14.65□□□□□ -0.06
RAB5B-208ENST00000550283 TBC1D9BQ66K14 1250 aa14.65□□□□□ -0.06
RAB5B-208ENST00000550283 IFT57Q9NWB7 429 aa14.65□□□□□ -0.06
RAB5B-208ENST00000550283 WWC3Q9ULE0 1092 aa14.65□□□□□ -0.06
RAB5B-208ENST00000550283 ELL2O00472 640 aaPredicted RBP14.64□□□□□ -0.07
RAB5B-208ENST00000550283 ZPR1O75312 459 aa14.64□□□□□ -0.07
RAB5B-208ENST00000550283 HLFQ16534 295 aa14.64□□□□□ -0.07
RAB5B-208ENST00000550283 BICDL1Q6ZP65 573 aa14.64□□□□□ -0.07
RAB5B-208ENST00000550283 DZIP3Q86Y13 1208 aaKnown RBP14.64□□□□□ -0.07
RAB5B-208ENST00000550283 NLGN1Q8N2Q7 840 aa14.64□□□□□ -0.07
RAB5B-208ENST00000550283 ZNF521Q96K83 1311 aa14.64□□□□□ -0.07
RAB5B-208ENST00000550283 CARMIL3Q8ND23 1372 aa14.63□□□□□ -0.07
RAB5B-208ENST00000550283 DCAF8L1A6NGE4 600 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms