RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 THUMPD2Q9BTF0 503 aaKnown RBP23.75■■□□□ 1.39
TUBA1A-206ENST00000550254 STARD3NLO95772 234 aa23.74■■□□□ 1.39
TUBA1A-206ENST00000550254 TEX13AQ9BXU3 409 aaPredicted RBP23.74■■□□□ 1.39
TUBA1A-206ENST00000550254 MIS18AQ9NYP9 233 aa23.74■■□□□ 1.39
TUBA1A-206ENST00000550254 USP42Q9H9J4 1324 aaKnown RBP23.74■■□□□ 1.39
TUBA1A-206ENST00000550254 MMP10P09238 476 aa23.73■■□□□ 1.39
TUBA1A-206ENST00000550254 TMPOP42166 694 aaKnown RBP23.73■■□□□ 1.39
TUBA1A-206ENST00000550254 RIPK4P57078 832 aa23.73■■□□□ 1.39
TUBA1A-206ENST00000550254 PRAMEF22A3QJZ6 481 aa23.72■■□□□ 1.39
TUBA1A-206ENST00000550254 CANXP27824 592 aaKnown RBP23.72■■□□□ 1.39
TUBA1A-206ENST00000550254 RUNDC1Q96C34 613 aa23.72■■□□□ 1.39
TUBA1A-206ENST00000550254 CD2APQ9Y5K6 639 aa23.72■■□□□ 1.39
TUBA1A-206ENST00000550254 COL15A1P39059 1388 aa23.72■■□□□ 1.39
TUBA1A-206ENST00000550254 DCAF8L1A6NGE4 600 aa23.71■■□□□ 1.39
TUBA1A-206ENST00000550254 CCDC184Q52MB2 194 aa23.71■■□□□ 1.39
TUBA1A-206ENST00000550254 USP16Q9Y5T5 823 aa23.71■■□□□ 1.39
TUBA1A-206ENST00000550254 EIF5P55010 431 aaKnown RBP23.7■■□□□ 1.38
TUBA1A-206ENST00000550254 FKBP8Q14318 412 aa23.7■■□□□ 1.38
TUBA1A-206ENST00000550254 RRP7AQ9Y3A4 280 aaKnown RBP23.7■■□□□ 1.38
TUBA1A-206ENST00000550254 A1BGP04217 495 aa23.69■■□□□ 1.38
TUBA1A-206ENST00000550254 USPL1Q5W0Q7 1092 aa23.69■■□□□ 1.38
TUBA1A-206ENST00000550254 PNISRQ8TF01 805 aaKnown RBP23.69■■□□□ 1.38
TUBA1A-206ENST00000550254 NARFQ9UHQ1 456 aa23.69■■□□□ 1.38
TUBA1A-206ENST00000550254 KIF13BQ9NQT8 1826 aa23.68■■□□□ 1.38
TUBA1A-206ENST00000550254 SNRPA1P09661 255 aaKnown RBP23.68■■□□□ 1.38
TUBA1A-206ENST00000550254 ZPR1O75312 459 aa23.67■■□□□ 1.38
TUBA1A-206ENST00000550254 NEUROD2Q15784 382 aa23.66■■□□□ 1.38
TUBA1A-206ENST00000550254 BCL2L12Q9HB09 334 aa23.66■■□□□ 1.38
TUBA1A-206ENST00000550254 LAMB4A4D0S4 1761 aa23.65■■□□□ 1.38
TUBA1A-206ENST00000550254 TM4SF1P30408 202 aa23.65■■□□□ 1.38
TUBA1A-206ENST00000550254 IL6STP40189 918 aaPredicted RBP23.65■■□□□ 1.38
TUBA1A-206ENST00000550254 EIF4A1P60842 406 aaKnown RBP23.65■■□□□ 1.38
TUBA1A-206ENST00000550254 TRIM35Q9UPQ4 493 aa23.65■■□□□ 1.38
TUBA1A-206ENST00000550254 KIAA1551Q9HCM1 1747 aa23.64■■□□□ 1.38
TUBA1A-206ENST00000550254 DDR1Q08345 913 aa23.64■■□□□ 1.37
TUBA1A-206ENST00000550254 LMOD3Q0VAK6 560 aa23.64■■□□□ 1.37
TUBA1A-206ENST00000550254 PARP3Q9Y6F1 533 aa23.64■■□□□ 1.37
TUBA1A-206ENST00000550254 A0A087WZG4 1122 aa23.63■■□□□ 1.37
TUBA1A-206ENST00000550254 ANP32CO43423 234 aa23.63■■□□□ 1.37
TUBA1A-206ENST00000550254 PIP4K2AP48426 406 aaPredicted RBP23.63■■□□□ 1.37
TUBA1A-206ENST00000550254 GPR162Q16538 588 aa23.63■■□□□ 1.37
TUBA1A-206ENST00000550254 C10orf71Q711Q0 1435 aa23.62■■□□□ 1.37
TUBA1A-206ENST00000550254 SCN7AQ01118 1682 aa23.62■■□□□ 1.37
TUBA1A-206ENST00000550254 POLRMTO00411 1230 aaKnown RBP23.61■■□□□ 1.37
TUBA1A-206ENST00000550254 GIGYF1O75420 1035 aaPredicted RBP23.61■■□□□ 1.37
TUBA1A-206ENST00000550254 PELP1Q8IZL8 1130 aaKnown RBP23.61■■□□□ 1.37
TUBA1A-206ENST00000550254 TBC1D2BQ9UPU7 963 aa23.61■■□□□ 1.37
TUBA1A-206ENST00000550254 ZNF330Q9Y3S2 320 aaPredicted RBP23.61■■□□□ 1.37
TUBA1A-206ENST00000550254 AFDNP55196 1824 aaKnown RBP23.61■■□□□ 1.37
TUBA1A-206ENST00000550254 N4BP2Q86UW6 1770 aaPredicted RBP23.6■■□□□ 1.37
TUBA1A-206ENST00000550254 NBPF26B4DH59 902 aa23.6■■□□□ 1.37
TUBA1A-206ENST00000550254 YBX3P16989 372 aaKnown RBP eCLIP23.6■■□□□ 1.37
TUBA1A-206ENST00000550254 NFIXQ14938 502 aa23.6■■□□□ 1.37
TUBA1A-206ENST00000550254 NBPF10Q6P3W6 841 aaKnown RBP23.6■■□□□ 1.37
TUBA1A-206ENST00000550254 NBPF15Q8N660 670 aa23.6■■□□□ 1.37
TUBA1A-206ENST00000550254 TSPYL4Q9UJ04 414 aa23.6■■□□□ 1.37
TUBA1A-206ENST00000550254 NRXN2Q9P2S2 1712 aa23.59■■□□□ 1.37
TUBA1A-206ENST00000550254 UTRNP46939 3433 aa23.59■■□□□ 1.37
TUBA1A-206ENST00000550254 BABAM1Q9NWV8 329 aa23.59■■□□□ 1.37
TUBA1A-206ENST00000550254 BCORQ6W2J9 1755 aa23.59■■□□□ 1.37
TUBA1A-206ENST00000550254 PXDNLA1KZ92 1463 aa23.58■■□□□ 1.37
TUBA1A-206ENST00000550254 APAF1O14727 1248 aa23.58■■□□□ 1.37
TUBA1A-206ENST00000550254 CHD4Q14839 1912 aa23.57■■□□□ 1.36
TUBA1A-206ENST00000550254 CAMTA2O94983 1202 aa23.56■■□□□ 1.36
TUBA1A-206ENST00000550254 TGFB2P61812 414 aa23.56■■□□□ 1.36
TUBA1A-206ENST00000550254 CHL1O00533 1208 aa23.55■■□□□ 1.36
TUBA1A-206ENST00000550254 TBC1D9BQ66K14 1250 aa23.55■■□□□ 1.36
TUBA1A-206ENST00000550254 DZIP3Q86Y13 1208 aaKnown RBP23.55■■□□□ 1.36
TUBA1A-206ENST00000550254 GOLGB1Q14789 3259 aaKnown RBP23.55■■□□□ 1.36
TUBA1A-206ENST00000550254 YY1P25490 414 aa23.54■■□□□ 1.36
TUBA1A-206ENST00000550254 NPM2Q86SE8 214 aaKnown RBP23.54■■□□□ 1.36
TUBA1A-206ENST00000550254 MRS2Q9HD23 443 aa23.54■■□□□ 1.36
TUBA1A-206ENST00000550254 WWC3Q9ULE0 1092 aa23.54■■□□□ 1.36
TUBA1A-206ENST00000550254 A0A0G2JLW4 131 aa23.53■■□□□ 1.36
TUBA1A-206ENST00000550254 SERPINB2P05120 415 aa23.53■■□□□ 1.36
TUBA1A-206ENST00000550254 BICDL1Q6ZP65 573 aa23.53■■□□□ 1.36
TUBA1A-206ENST00000550254 BRCA1P38398 1863 aaKnown RBP23.53■■□□□ 1.36
TUBA1A-206ENST00000550254 DPEP1P16444 411 aa23.52■■□□□ 1.36
TUBA1A-206ENST00000550254 LAS1LQ9Y4W2 734 aaKnown RBP23.52■■□□□ 1.36
TUBA1A-206ENST00000550254 GRIN3BO60391 1043 aa23.51■■□□□ 1.35
TUBA1A-206ENST00000550254 KCNA3P22001 575 aa23.51■■□□□ 1.35
TUBA1A-206ENST00000550254 KRT24Q2M2I5 525 aa23.49■■□□□ 1.35
TUBA1A-206ENST00000550254 CFAP44Q96MT7 982 aa23.48■■□□□ 1.35
TUBA1A-206ENST00000550254 ZNF853P0CG23 659 aa23.47■■□□□ 1.35
TUBA1A-206ENST00000550254 MYL6BP14649 208 aa23.47■■□□□ 1.35
TUBA1A-206ENST00000550254 CLEC4GQ6UXB4 293 aa23.47■■□□□ 1.35
TUBA1A-206ENST00000550254 NGEFQ8N5V2 710 aa23.47■■□□□ 1.35
TUBA1A-206ENST00000550254 CARMIL3Q8ND23 1372 aa23.47■■□□□ 1.35
TUBA1A-206ENST00000550254 EIF2S2P20042 333 aaKnown RBP23.46■■□□□ 1.35
TUBA1A-206ENST00000550254 CHRNA5P30532 468 aa23.46■■□□□ 1.35
TUBA1A-206ENST00000550254 PDIA6Q15084 440 aa23.46■■□□□ 1.35
TUBA1A-206ENST00000550254 ERBB4Q15303 1308 aa23.46■■□□□ 1.35
TUBA1A-206ENST00000550254 ANKRD31Q8N7Z5 1873 aa23.46■■□□□ 1.35
TUBA1A-206ENST00000550254 SENP3-EIF4A1A0A087X0R7 540 aa23.45■■□□□ 1.34
TUBA1A-206ENST00000550254 HLFQ16534 295 aa23.45■■□□□ 1.34
TUBA1A-206ENST00000550254 TTLL7Q6ZT98 887 aa23.45■■□□□ 1.34
TUBA1A-206ENST00000550254 LRP10Q7Z4F1 713 aa23.45■■□□□ 1.34
TUBA1A-206ENST00000550254 SETDB2Q96T68 719 aa23.45■■□□□ 1.34
TUBA1A-206ENST00000550254 MBIPQ9NS73 344 aa23.45■■□□□ 1.34
TUBA1A-206ENST00000550254 NUP98P52948 1817 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms