RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 RGPD3A6NKT7 1758 aaPredicted RBP11.58□□□□□ -0.56
CACNB3-215ENST00000550190 RGPD4Q7Z3J3 1758 aa11.58□□□□□ -0.56
CACNB3-215ENST00000550190 HOXB7P09629 217 aa11.57□□□□□ -0.56
CACNB3-215ENST00000550190 CYP19A1P11511 503 aaPredicted RBP11.57□□□□□ -0.56
CACNB3-215ENST00000550190 CANXP27824 592 aaKnown RBP11.57□□□□□ -0.56
CACNB3-215ENST00000550190 CCDC30Q5VVM6 783 aa11.57□□□□□ -0.56
CACNB3-215ENST00000550190 LINC00116Q8NCU8 138 aa11.57□□□□□ -0.56
CACNB3-215ENST00000550190 CAMKK2Q96RR4 588 aa11.57□□□□□ -0.56
CACNB3-215ENST00000550190 ZNF330Q9Y3S2 320 aaPredicted RBP11.57□□□□□ -0.56
CACNB3-215ENST00000550190 SOS1Q07889 1333 aaPredicted RBP11.57□□□□□ -0.56
CACNB3-215ENST00000550190 CACNA1FO60840 1977 aa11.56□□□□□ -0.56
CACNB3-215ENST00000550190 MYH14Q7Z406 1995 aaKnown RBP11.56□□□□□ -0.56
CACNB3-215ENST00000550190 ANXA1P04083 346 aa11.56□□□□□ -0.56
CACNB3-215ENST00000550190 CT47B1P0C2W7 299 aaPredicted RBP11.56□□□□□ -0.56
CACNB3-215ENST00000550190 MYL6BP14649 208 aa11.56□□□□□ -0.56
CACNB3-215ENST00000550190 BCL2L13Q9BXK5 485 aa11.56□□□□□ -0.56
CACNB3-215ENST00000550190 STK31Q9BXU1 1019 aa11.56□□□□□ -0.56
CACNB3-215ENST00000550190 CHMP4AQ9BY43 222 aa11.56□□□□□ -0.56
CACNB3-215ENST00000550190 CHPF2Q9P2E5 772 aa11.56□□□□□ -0.56
CACNB3-215ENST00000550190 CICQ96RK0 1608 aaPredicted RBP11.56□□□□□ -0.56
CACNB3-215ENST00000550190 RREB1Q92766 1687 aa11.55□□□□□ -0.56
CACNB3-215ENST00000550190 C4BP0C0L5 1744 aa11.55□□□□□ -0.56
CACNB3-215ENST00000550190 CRKLP46109 303 aaKnown RBP11.55□□□□□ -0.56
CACNB3-215ENST00000550190 ARXQ96QS3 562 aa11.55□□□□□ -0.56
CACNB3-215ENST00000550190 CCDC87Q9NVE4 849 aa11.55□□□□□ -0.56
CACNB3-215ENST00000550190 SLC4A2P04920 1241 aa11.54□□□□□ -0.56
CACNB3-215ENST00000550190 INTS5Q6P9B9 1019 aaKnown RBP11.54□□□□□ -0.56
CACNB3-215ENST00000550190 NPM2Q86SE8 214 aaKnown RBP11.54□□□□□ -0.56
CACNB3-215ENST00000550190 SSH1Q8WYL5 1049 aa11.54□□□□□ -0.56
CACNB3-215ENST00000550190 AK7Q96M32 723 aa11.54□□□□□ -0.56
CACNB3-215ENST00000550190 SMC4Q9NTJ3 1288 aa11.54□□□□□ -0.56
CACNB3-215ENST00000550190 DBF4Q9UBU7 674 aaPredicted RBP11.54□□□□□ -0.56
CACNB3-215ENST00000550190 RCAN3Q9UKA8 241 aa11.54□□□□□ -0.56
CACNB3-215ENST00000550190 ZBTB1Q9Y2K1 713 aa11.54□□□□□ -0.56
CACNB3-215ENST00000550190 NUP188Q5SRE5 1749 aa11.54□□□□□ -0.56
CACNB3-215ENST00000550190 NBPF26B4DH59 902 aa11.53□□□□□ -0.56
CACNB3-215ENST00000550190 GNPATO15228 680 aa11.53□□□□□ -0.56
CACNB3-215ENST00000550190 BCAR3O75815 825 aa11.53□□□□□ -0.56
CACNB3-215ENST00000550190 HMGB2P26583 209 aaKnown RBP11.53□□□□□ -0.56
CACNB3-215ENST00000550190 RARSP54136 660 aaKnown RBP11.53□□□□□ -0.56
CACNB3-215ENST00000550190 AIMP1Q12904 312 aaKnown RBP11.53□□□□□ -0.56
CACNB3-215ENST00000550190 PROSER3Q2NL68 480 aa11.53□□□□□ -0.56
CACNB3-215ENST00000550190 ALDH1L2Q3SY69 923 aa11.53□□□□□ -0.56
CACNB3-215ENST00000550190 NBPF14Q5TI25 921 aa11.53□□□□□ -0.56
CACNB3-215ENST00000550190 NBPF10Q6P3W6 841 aaKnown RBP11.53□□□□□ -0.56
CACNB3-215ENST00000550190 NBPF15Q8N660 670 aa11.53□□□□□ -0.56
CACNB3-215ENST00000550190 ZNF428Q96B54 188 aa11.53□□□□□ -0.56
CACNB3-215ENST00000550190 DDX21Q9NR30 783 aaKnown RBP eCLIP11.53□□□□□ -0.56
CACNB3-215ENST00000550190 CNTNAP4Q9C0A0 1308 aa11.53□□□□□ -0.56
CACNB3-215ENST00000550190 PHF14O94880 888 aa11.52□□□□□ -0.57
CACNB3-215ENST00000550190 PDIA6Q15084 440 aa11.52□□□□□ -0.57
CACNB3-215ENST00000550190 RC3H1Q5TC82 1133 aaKnown RBP11.52□□□□□ -0.57
CACNB3-215ENST00000550190 SMIM5Q71RC9 77 aa11.52□□□□□ -0.57
CACNB3-215ENST00000550190 G2E3Q7L622 706 aa11.52□□□□□ -0.57
CACNB3-215ENST00000550190 MRPL50Q8N5N7 158 aaKnown RBP11.52□□□□□ -0.57
CACNB3-215ENST00000550190 PHAXQ9H814 394 aaKnown RBP11.52□□□□□ -0.57
CACNB3-215ENST00000550190 HYPKQ9NX55 129 aa11.52□□□□□ -0.57
CACNB3-215ENST00000550190 STK32BQ9NY57 414 aa11.52□□□□□ -0.57
CACNB3-215ENST00000550190 RTCBQ9Y3I0 505 aaKnown RBP11.52□□□□□ -0.57
CACNB3-215ENST00000550190 ERBB4Q15303 1308 aa11.52□□□□□ -0.57
CACNB3-215ENST00000550190 TUBGCP6Q96RT7 1819 aa11.51□□□□□ -0.57
CACNB3-215ENST00000550190 UBR3Q6ZT12 1888 aa11.51□□□□□ -0.57
CACNB3-215ENST00000550190 RPS6KA4O75676 772 aa11.51□□□□□ -0.57
CACNB3-215ENST00000550190 IL6STP40189 918 aaPredicted RBP11.51□□□□□ -0.57
CACNB3-215ENST00000550190 FRAT1Q92837 279 aaPredicted RBP11.51□□□□□ -0.57
CACNB3-215ENST00000550190 TFCP2L1Q9NZI6 479 aa11.51□□□□□ -0.57
CACNB3-215ENST00000550190 MSH5O43196 834 aa11.5□□□□□ -0.57
CACNB3-215ENST00000550190 ZNF827Q17R98 1081 aa11.5□□□□□ -0.57
CACNB3-215ENST00000550190 COPS6Q7L5N1 327 aa11.5□□□□□ -0.57
CACNB3-215ENST00000550190 XAGE3Q8WTP9 111 aa11.5□□□□□ -0.57
CACNB3-215ENST00000550190 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
CACNB3-215ENST00000550190 EIF5P55010 431 aaKnown RBP11.49□□□□□ -0.57
CACNB3-215ENST00000550190 FLIIQ13045 1269 aa11.49□□□□□ -0.57
CACNB3-215ENST00000550190 FKBP5Q13451 457 aaPredicted RBP11.49□□□□□ -0.57
CACNB3-215ENST00000550190 SLC15A2Q16348 729 aa11.49□□□□□ -0.57
CACNB3-215ENST00000550190 TRAPPC3LQ5T215 181 aa11.49□□□□□ -0.57
CACNB3-215ENST00000550190 TTLL7Q6ZT98 887 aa11.49□□□□□ -0.57
CACNB3-215ENST00000550190 DZIP3Q86Y13 1208 aaKnown RBP11.49□□□□□ -0.57
CACNB3-215ENST00000550190 NOB1Q9ULX3 412 aaKnown RBP11.49□□□□□ -0.57
CACNB3-215ENST00000550190 TBC1D2BQ9UPU7 963 aa11.49□□□□□ -0.57
CACNB3-215ENST00000550190 A0A087WZG4 1122 aa11.48□□□□□ -0.57
CACNB3-215ENST00000550190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.48□□□□□ -0.57
CACNB3-215ENST00000550190 RFC4P35249 363 aa11.48□□□□□ -0.57
CACNB3-215ENST00000550190 KIF6Q6ZMV9 814 aa11.48□□□□□ -0.57
CACNB3-215ENST00000550190 ANO8Q9HCE9 1232 aaPredicted RBP11.48□□□□□ -0.57
CACNB3-215ENST00000550190 COL15A1P39059 1388 aa11.48□□□□□ -0.57
CACNB3-215ENST00000550190 NUP98P52948 1817 aa11.47□□□□□ -0.57
CACNB3-215ENST00000550190 C4AP0C0L4 1744 aa11.47□□□□□ -0.57
CACNB3-215ENST00000550190 KIF16BQ96L93 1317 aa11.47□□□□□ -0.57
CACNB3-215ENST00000550190 IPO8O15397 1037 aaKnown RBP11.47□□□□□ -0.57
CACNB3-215ENST00000550190 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
CACNB3-215ENST00000550190 LRP10Q7Z4F1 713 aa11.47□□□□□ -0.57
CACNB3-215ENST00000550190 RIC3Q7Z5B4 369 aa11.47□□□□□ -0.57
CACNB3-215ENST00000550190 AMIGO3Q86WK7 504 aa11.47□□□□□ -0.57
CACNB3-215ENST00000550190 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
CACNB3-215ENST00000550190 ZBTB3Q9H5J0 574 aa11.47□□□□□ -0.57
CACNB3-215ENST00000550190 SUPT16HQ9Y5B9 1047 aaKnown RBP11.47□□□□□ -0.57
CACNB3-215ENST00000550190 EP400Q96L91 3159 aa11.47□□□□□ -0.57
CACNB3-215ENST00000550190 ARFGEF2Q9Y6D5 1785 aa11.46□□□□□ -0.57
CACNB3-215ENST00000550190 F6X3S4 739 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms