RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 CHL1O00533 1208 aa19.48■□□□□ 0.71
GPN3-206ENST00000549963 ZBTB7AO95365 584 aa19.48■□□□□ 0.71
GPN3-206ENST00000549963 RFC4P35249 363 aa19.48■□□□□ 0.71
GPN3-206ENST00000549963 EIF4A1P60842 406 aaKnown RBP19.48■□□□□ 0.71
GPN3-206ENST00000549963 PDGFDQ9GZP0 370 aaPredicted RBP19.48■□□□□ 0.71
GPN3-206ENST00000549963 TUBGCP6Q96RT7 1819 aa19.48■□□□□ 0.71
GPN3-206ENST00000549963 KDM3BQ7LBC6 1761 aa19.47■□□□□ 0.71
GPN3-206ENST00000549963 MYH14Q7Z406 1995 aaKnown RBP19.47■□□□□ 0.71
GPN3-206ENST00000549963 INTS5Q6P9B9 1019 aaKnown RBP19.47■□□□□ 0.71
GPN3-206ENST00000549963 ATF5Q9Y2D1 282 aaPredicted RBP19.47■□□□□ 0.71
GPN3-206ENST00000549963 CASZ1Q86V15 1759 aa19.47■□□□□ 0.71
GPN3-206ENST00000549963 CANXP27824 592 aaKnown RBP19.46■□□□□ 0.71
GPN3-206ENST00000549963 WWC1Q8IX03 1113 aa19.46■□□□□ 0.71
GPN3-206ENST00000549963 IFT57Q9NWB7 429 aa19.46■□□□□ 0.71
GPN3-206ENST00000549963 SALL2Q9Y467 1007 aaPredicted RBP19.46■□□□□ 0.71
GPN3-206ENST00000549963 A0A087WZG4 1122 aa19.45■□□□□ 0.7
GPN3-206ENST00000549963 POLD1P28340 1107 aa19.45■□□□□ 0.7
GPN3-206ENST00000549963 ARHGEF1Q92888 912 aaKnown RBP19.45■□□□□ 0.7
GPN3-206ENST00000549963 PPP1R1BQ9UD71 204 aaPredicted RBP19.45■□□□□ 0.7
GPN3-206ENST00000549963 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
GPN3-206ENST00000549963 GIGYF1O75420 1035 aaPredicted RBP19.44■□□□□ 0.7
GPN3-206ENST00000549963 SENP3-EIF4A1A0A087X0R7 540 aa19.43■□□□□ 0.7
GPN3-206ENST00000549963 ZPR1O75312 459 aa19.43■□□□□ 0.7
GPN3-206ENST00000549963 WDR63Q8IWG1 891 aa19.43■□□□□ 0.7
GPN3-206ENST00000549963 A1BGP04217 495 aa19.42■□□□□ 0.7
GPN3-206ENST00000549963 IL6STP40189 918 aaPredicted RBP19.42■□□□□ 0.7
GPN3-206ENST00000549963 SMIM5Q71RC9 77 aa19.42■□□□□ 0.7
GPN3-206ENST00000549963 CHMP4AQ9BY43 222 aa19.42■□□□□ 0.7
GPN3-206ENST00000549963 ZBTB1Q9Y2K1 713 aa19.42■□□□□ 0.7
GPN3-206ENST00000549963 IL16Q14005 1332 aa19.42■□□□□ 0.7
GPN3-206ENST00000549963 ZNF853P0CG23 659 aa19.41■□□□□ 0.7
GPN3-206ENST00000549963 NLGN1Q8N2Q7 840 aa19.41■□□□□ 0.7
GPN3-206ENST00000549963 ARXQ96QS3 562 aa19.41■□□□□ 0.7
GPN3-206ENST00000549963 MBIPQ9NS73 344 aa19.41■□□□□ 0.7
GPN3-206ENST00000549963 ZNF330Q9Y3S2 320 aaPredicted RBP19.41■□□□□ 0.7
GPN3-206ENST00000549963 PRAMEF22A3QJZ6 481 aa19.4■□□□□ 0.7
GPN3-206ENST00000549963 AMIGO3Q86WK7 504 aa19.4■□□□□ 0.7
GPN3-206ENST00000549963 SOS1Q07889 1333 aaPredicted RBP19.4■□□□□ 0.7
GPN3-206ENST00000549963 EIF2S2P20042 333 aaKnown RBP19.39■□□□□ 0.69
GPN3-206ENST00000549963 EIF5P55010 431 aaKnown RBP19.39■□□□□ 0.69
GPN3-206ENST00000549963 LRP5O75197 1615 aa19.39■□□□□ 0.69
GPN3-206ENST00000549963 HOXB7P09629 217 aa19.38■□□□□ 0.69
GPN3-206ENST00000549963 COL15A1P39059 1388 aa19.38■□□□□ 0.69
GPN3-206ENST00000549963 MSL1Q68DK7 614 aa19.38■□□□□ 0.69
GPN3-206ENST00000549963 NARFQ9UHQ1 456 aa19.38■□□□□ 0.69
GPN3-206ENST00000549963 LAMB4A4D0S4 1761 aa19.37■□□□□ 0.69
GPN3-206ENST00000549963 ERBB4Q15303 1308 aa19.36■□□□□ 0.69
GPN3-206ENST00000549963 PTGER2P43116 358 aa19.36■□□□□ 0.69
GPN3-206ENST00000549963 MYH16Q9H6N6 1097 aa19.36■□□□□ 0.69
GPN3-206ENST00000549963 USP42Q9H9J4 1324 aaKnown RBP19.35■□□□□ 0.69
GPN3-206ENST00000549963 GYS1P13807 737 aa19.35■□□□□ 0.69
GPN3-206ENST00000549963 DUSP27Q5VZP5 1158 aa19.35■□□□□ 0.69
GPN3-206ENST00000549963 GOLGA2Q08379 1002 aa19.34■□□□□ 0.69
GPN3-206ENST00000549963 USPL1Q5W0Q7 1092 aa19.34■□□□□ 0.69
GPN3-206ENST00000549963 DZIP3Q86Y13 1208 aaKnown RBP19.34■□□□□ 0.69
GPN3-206ENST00000549963 SRP68Q9UHB9 627 aaKnown RBP19.34■□□□□ 0.69
GPN3-206ENST00000549963 TBC1D2BQ9UPU7 963 aa19.34■□□□□ 0.69
GPN3-206ENST00000549963 MYL6BP14649 208 aa19.33■□□□□ 0.68
GPN3-206ENST00000549963 PIP4K2AP48426 406 aaPredicted RBP19.33■□□□□ 0.68
GPN3-206ENST00000549963 HDGFL1Q5TGJ6 251 aa19.33■□□□□ 0.68
GPN3-206ENST00000549963 SGIP1Q9BQI5 828 aa19.33■□□□□ 0.68
GPN3-206ENST00000549963 C4AP0C0L4 1744 aa19.33■□□□□ 0.68
GPN3-206ENST00000549963 COL24A1Q17RW2 1714 aa19.32■□□□□ 0.68
GPN3-206ENST00000549963 NBPF26B4DH59 902 aa19.32■□□□□ 0.68
GPN3-206ENST00000549963 KRT24Q2M2I5 525 aa19.32■□□□□ 0.68
GPN3-206ENST00000549963 NBPF10Q6P3W6 841 aaKnown RBP19.32■□□□□ 0.68
GPN3-206ENST00000549963 NBPF15Q8N660 670 aa19.32■□□□□ 0.68
GPN3-206ENST00000549963 NECTIN2Q92692 538 aa19.32■□□□□ 0.68
GPN3-206ENST00000549963 TSR2Q969E8 191 aaKnown RBP19.32■□□□□ 0.68
GPN3-206ENST00000549963 ZNF652Q9Y2D9 606 aa19.32■□□□□ 0.68
GPN3-206ENST00000549963 PARP3Q9Y6F1 533 aa19.32■□□□□ 0.68
GPN3-206ENST00000549963 ELL2O00472 640 aaPredicted RBP19.31■□□□□ 0.68
GPN3-206ENST00000549963 KIF6Q6ZMV9 814 aa19.31■□□□□ 0.68
GPN3-206ENST00000549963 MMP10P09238 476 aa19.3■□□□□ 0.68
GPN3-206ENST00000549963 FKBP8Q14318 412 aa19.3■□□□□ 0.68
GPN3-206ENST00000549963 DDX21Q9NR30 783 aaKnown RBP eCLIP19.3■□□□□ 0.68
GPN3-206ENST00000549963 DBF4Q9UBU7 674 aaPredicted RBP19.3■□□□□ 0.68
GPN3-206ENST00000549963 CCDC30Q5VVM6 783 aa19.29■□□□□ 0.68
GPN3-206ENST00000549963 CLEC4GQ6UXB4 293 aa19.29■□□□□ 0.68
GPN3-206ENST00000549963 KLHL34Q8N239 644 aa19.29■□□□□ 0.68
GPN3-206ENST00000549963 C8orf58Q8NAV2 365 aa19.29■□□□□ 0.68
GPN3-206ENST00000549963 E9PSI1 815 aa19.28■□□□□ 0.68
GPN3-206ENST00000549963 RGL2O15211 777 aa19.28■□□□□ 0.68
GPN3-206ENST00000549963 HYPKQ9NX55 129 aa19.28■□□□□ 0.68
GPN3-206ENST00000549963 FANCIQ9NVI1 1328 aa19.27■□□□□ 0.68
GPN3-206ENST00000549963 ERVV-1B6SEH8 477 aa19.27■□□□□ 0.68
GPN3-206ENST00000549963 TWISTNBQ3B726 338 aaPredicted RBP19.27■□□□□ 0.68
GPN3-206ENST00000549963 ZNF521Q96K83 1311 aa19.26■□□□□ 0.67
GPN3-206ENST00000549963 DCAF8L1A6NGE4 600 aa19.26■□□□□ 0.67
GPN3-206ENST00000549963 CAMTA2O94983 1202 aa19.26■□□□□ 0.67
GPN3-206ENST00000549963 TM4SF1P30408 202 aa19.26■□□□□ 0.67
GPN3-206ENST00000549963 PDIA6Q15084 440 aa19.26■□□□□ 0.67
GPN3-206ENST00000549963 SETDB2Q96T68 719 aa19.26■□□□□ 0.67
GPN3-206ENST00000549963 STK31Q9BXU1 1019 aa19.26■□□□□ 0.67
GPN3-206ENST00000549963 FHDC1Q9C0D6 1143 aaPredicted RBP19.26■□□□□ 0.67
GPN3-206ENST00000549963 CHPF2Q9P2E5 772 aa19.26■□□□□ 0.67
GPN3-206ENST00000549963 HNRNPUQ00839 825 aaKnown RBP eCLIP19.25■□□□□ 0.67
GPN3-206ENST00000549963 BICDL1Q6ZP65 573 aa19.25■□□□□ 0.67
GPN3-206ENST00000549963 BCL2L12Q9HB09 334 aa19.25■□□□□ 0.67
GPN3-206ENST00000549963 CD2APQ9Y5K6 639 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms