RNA–Protein interactions for RNA: ENST00000549710.1

AC011601.1-201, humanhuman

TSL 3 BASIC

Gene AC011601.1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011601.1-201ENST00000549710 PCDHB11Q9Y5F2 797 aa9.72□□□□□ -0.85
AC011601.1-201ENST00000549710 K7ELQ4 463 aaPredicted RBP9.71□□□□□ -0.86
AC011601.1-201ENST00000549710 GPR182O15218 404 aa9.71□□□□□ -0.86
AC011601.1-201ENST00000549710 FZD6O60353 706 aa9.71□□□□□ -0.86
AC011601.1-201ENST00000549710 RACK1P63244 317 aaKnown RBP9.71□□□□□ -0.86
AC011601.1-201ENST00000549710 HSP90AB4PQ58FF6 505 aa9.71□□□□□ -0.86
AC011601.1-201ENST00000549710 CCAR1Q8IX12 1150 aaKnown RBP9.71□□□□□ -0.86
AC011601.1-201ENST00000549710 RPUSD2Q8IZ73 545 aaKnown RBP9.71□□□□□ -0.86
AC011601.1-201ENST00000549710 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.71□□□□□ -0.86
AC011601.1-201ENST00000549710 IGHA2P01877 340 aa9.7□□□□□ -0.86
AC011601.1-201ENST00000549710 EIF1AXP47813 144 aaKnown RBP9.7□□□□□ -0.86
AC011601.1-201ENST00000549710 ZNF394Q53GI3 561 aa9.7□□□□□ -0.86
AC011601.1-201ENST00000549710 ALKBH2Q6NS38 261 aa9.7□□□□□ -0.86
AC011601.1-201ENST00000549710 SCUBE3Q8IX30 993 aa9.7□□□□□ -0.86
AC011601.1-201ENST00000549710 PMM1Q92871 262 aa9.7□□□□□ -0.86
AC011601.1-201ENST00000549710 FAM129BQ96TA1 746 aa9.7□□□□□ -0.86
AC011601.1-201ENST00000549710 PRR14Q9BWN1 585 aa9.7□□□□□ -0.86
AC011601.1-201ENST00000549710 SLC4A5Q9BY07 1137 aa9.7□□□□□ -0.86
AC011601.1-201ENST00000549710 DDX56Q9NY93 547 aaKnown RBP9.7□□□□□ -0.86
AC011601.1-201ENST00000549710 MAGEB6P1A0A0J9YX57 407 aa9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 PPP1R12AO14974 1030 aaPredicted RBP9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 U2SURPO15042 1029 aaKnown RBP9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 S100BP04271 92 aaPredicted RBP9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 NBPF20Q3BBV1 942 aa9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 LAPTM4BQ86VI4 370 aa9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 SCG3Q8WXD2 468 aaKnown RBP9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 SAP130Q9H0E3 1048 aa9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 ZNF358Q9NW07 568 aa9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 GABBR1Q9UBS5 961 aa9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 G3BP2Q9UN86 482 aaKnown RBP9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 PRKAB1Q9Y478 270 aa9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 PCDHGB7Q9Y5F8 929 aa9.69□□□□□ -0.86
AC011601.1-201ENST00000549710 ESPNB1AK53 854 aa9.68□□□□□ -0.86
AC011601.1-201ENST00000549710 DXOO77932 396 aaKnown RBP9.68□□□□□ -0.86
AC011601.1-201ENST00000549710 NBPF6Q5VWK0 638 aa9.68□□□□□ -0.86
AC011601.1-201ENST00000549710 C16orf46Q6P387 395 aa9.68□□□□□ -0.86
AC011601.1-201ENST00000549710 USP48Q86UV5 1035 aa9.68□□□□□ -0.86
AC011601.1-201ENST00000549710 CKAP2LQ8IYA6 745 aa9.68□□□□□ -0.86
AC011601.1-201ENST00000549710 MKL1Q969V6 931 aa9.68□□□□□ -0.86
AC011601.1-201ENST00000549710 ALKBH8Q96BT7 664 aaKnown RBP9.68□□□□□ -0.86
AC011601.1-201ENST00000549710 NBPF4Q96M43 638 aa9.68□□□□□ -0.86
AC011601.1-201ENST00000549710 PNMA6FA0A0J9YX94 578 aa9.67□□□□□ -0.86
AC011601.1-201ENST00000549710 HMGB1P1B2RPK0 211 aaPredicted RBP9.67□□□□□ -0.86
AC011601.1-201ENST00000549710 ENOX2Q16206 610 aaKnown RBP9.67□□□□□ -0.86
AC011601.1-201ENST00000549710 ALG1LQ6GMV1 187 aa9.67□□□□□ -0.86
AC011601.1-201ENST00000549710 APBB1IPQ7Z5R6 666 aaPredicted RBP9.67□□□□□ -0.86
AC011601.1-201ENST00000549710 CCDC146Q8IYE0 955 aa9.67□□□□□ -0.86
AC011601.1-201ENST00000549710 CRELD1Q96HD1 420 aa9.67□□□□□ -0.86
AC011601.1-201ENST00000549710 UBA5Q9GZZ9 404 aa9.67□□□□□ -0.86
AC011601.1-201ENST00000549710 TMX1Q9H3N1 280 aa9.67□□□□□ -0.86
AC011601.1-201ENST00000549710 NR1I2O75469 434 aa9.66□□□□□ -0.86
AC011601.1-201ENST00000549710 ATF4P18848 351 aaPredicted RBP9.66□□□□□ -0.86
AC011601.1-201ENST00000549710 GNA15P30679 374 aa9.66□□□□□ -0.86
AC011601.1-201ENST00000549710 RALBP1Q15311 655 aa9.66□□□□□ -0.86
AC011601.1-201ENST00000549710 TEX2Q8IWB9 1127 aa9.66□□□□□ -0.86
AC011601.1-201ENST00000549710 STAG1Q8WVM7 1258 aa9.66□□□□□ -0.86
AC011601.1-201ENST00000549710 SPOCK3Q9BQ16 436 aa9.66□□□□□ -0.86
AC011601.1-201ENST00000549710 NIF3L1Q9GZT8 377 aa9.66□□□□□ -0.86
AC011601.1-201ENST00000549710 SRA1Q9HD15 236 aaKnown RBP9.66□□□□□ -0.86
AC011601.1-201ENST00000549710 ATAD2Q6PL18 1390 aa9.65□□□□□ -0.86
AC011601.1-201ENST00000549710 SERINC3Q13530 473 aa9.65□□□□□ -0.86
AC011601.1-201ENST00000549710 MSS51Q4VC12 460 aa9.65□□□□□ -0.86
AC011601.1-201ENST00000549710 PLEKHG4Q58EX7 1191 aa9.65□□□□□ -0.86
AC011601.1-201ENST00000549710 CHMP7Q8WUX9 453 aaPredicted RBP9.65□□□□□ -0.86
AC011601.1-201ENST00000549710 ZFRQ96KR1 1074 aaKnown RBP9.65□□□□□ -0.86
AC011601.1-201ENST00000549710 CREB3O43889 395 aa9.64□□□□□ -0.87
AC011601.1-201ENST00000549710 MYCP01106 439 aaPredicted RBP9.64□□□□□ -0.87
AC011601.1-201ENST00000549710 GJA8P48165 433 aa9.64□□□□□ -0.87
AC011601.1-201ENST00000549710 PTPN12Q05209 780 aaKnown RBP9.64□□□□□ -0.87
AC011601.1-201ENST00000549710 ERFEQ4G0M1 354 aa9.64□□□□□ -0.87
AC011601.1-201ENST00000549710 SH3RF1Q7Z6J0 888 aa9.64□□□□□ -0.87
AC011601.1-201ENST00000549710 CCDC136Q96JN2 1154 aa9.64□□□□□ -0.87
AC011601.1-201ENST00000549710 RNPC3Q96LT9 517 aaKnown RBP9.64□□□□□ -0.87
AC011601.1-201ENST00000549710 UNC93B1Q9H1C4 597 aa9.64□□□□□ -0.87
AC011601.1-201ENST00000549710 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.64□□□□□ -0.87
AC011601.1-201ENST00000549710 STIM2Q9P246 746 aa9.64□□□□□ -0.87
AC011601.1-201ENST00000549710 ZBTB24O43167 697 aaPredicted RBP9.63□□□□□ -0.87
AC011601.1-201ENST00000549710 CENPBP07199 599 aaPredicted RBP9.63□□□□□ -0.87
AC011601.1-201ENST00000549710 CTSHP09668 335 aa9.63□□□□□ -0.87
AC011601.1-201ENST00000549710 DMRTA1Q5VZB9 504 aa9.63□□□□□ -0.87
AC011601.1-201ENST00000549710 HS2ST1Q7LGA3 356 aa9.63□□□□□ -0.87
AC011601.1-201ENST00000549710 FMNL3Q8IVF7 1028 aa9.63□□□□□ -0.87
AC011601.1-201ENST00000549710 TNS4Q8IZW8 715 aa9.63□□□□□ -0.87
AC011601.1-201ENST00000549710 SLC10A4Q96EP9 437 aa9.63□□□□□ -0.87
AC011601.1-201ENST00000549710 LRCH3Q96II8 777 aa9.63□□□□□ -0.87
AC011601.1-201ENST00000549710 AK5Q9Y6K8 562 aa9.63□□□□□ -0.87
AC011601.1-201ENST00000549710 TMEM229AB2RXF0 380 aa9.62□□□□□ -0.87
AC011601.1-201ENST00000549710 ARHGAP33O14559 1287 aa9.62□□□□□ -0.87
AC011601.1-201ENST00000549710 TNFRSF10BO14763 440 aa9.62□□□□□ -0.87
AC011601.1-201ENST00000549710 HOXB1P14653 301 aaPredicted RBP9.62□□□□□ -0.87
AC011601.1-201ENST00000549710 MMP16P51512 607 aa9.62□□□□□ -0.87
AC011601.1-201ENST00000549710 SPTY2D1Q68D10 685 aaPredicted RBP9.62□□□□□ -0.87
AC011601.1-201ENST00000549710 FAM160A2Q8N612 972 aaPredicted RBP9.62□□□□□ -0.87
AC011601.1-201ENST00000549710 NBPF3Q9H094 633 aa9.62□□□□□ -0.87
AC011601.1-201ENST00000549710 SLKQ9H2G2 1235 aaPredicted RBP9.62□□□□□ -0.87
AC011601.1-201ENST00000549710 PCDHB3Q9Y5E6 796 aa9.62□□□□□ -0.87
AC011601.1-201ENST00000549710 TBX4P57082 545 aa9.61□□□□□ -0.87
AC011601.1-201ENST00000549710 AMPD3Q01432 767 aa9.61□□□□□ -0.87
AC011601.1-201ENST00000549710 FRMD6Q96NE9 622 aa9.61□□□□□ -0.87
AC011601.1-201ENST00000549710 PRDM9Q9NQV7 894 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms