RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 TRMT2AQ8IZ69 625 aaKnown RBP22.41■■□□□ 1.18
LETMD1-216ENST00000548401 HOXB7P09629 217 aa22.4■■□□□ 1.18
LETMD1-216ENST00000548401 CRKLP46109 303 aaKnown RBP22.39■■□□□ 1.17
LETMD1-216ENST00000548401 C8orf58Q8NAV2 365 aa22.39■■□□□ 1.17
LETMD1-216ENST00000548401 TEX13AQ9BXU3 409 aaPredicted RBP22.39■■□□□ 1.17
LETMD1-216ENST00000548401 USP16Q9Y5T5 823 aa22.39■■□□□ 1.17
LETMD1-216ENST00000548401 CASZ1Q86V15 1759 aa22.39■■□□□ 1.17
LETMD1-216ENST00000548401 DUSP27Q5VZP5 1158 aa22.38■■□□□ 1.17
LETMD1-216ENST00000548401 INTS5Q6P9B9 1019 aaKnown RBP22.38■■□□□ 1.17
LETMD1-216ENST00000548401 AMIGO3Q86WK7 504 aa22.38■■□□□ 1.17
LETMD1-216ENST00000548401 TSPYL6Q8N831 410 aa22.38■■□□□ 1.17
LETMD1-216ENST00000548401 RC3H1Q5TC82 1133 aaKnown RBP22.37■■□□□ 1.17
LETMD1-216ENST00000548401 CCDC87Q9NVE4 849 aa22.37■■□□□ 1.17
LETMD1-216ENST00000548401 SOS1Q07889 1333 aaPredicted RBP22.36■■□□□ 1.17
LETMD1-216ENST00000548401 STARD3NLO95772 234 aa22.36■■□□□ 1.17
LETMD1-216ENST00000548401 HMGB2P26583 209 aaKnown RBP22.36■■□□□ 1.17
LETMD1-216ENST00000548401 EXOSC9Q06265 439 aaKnown RBP22.36■■□□□ 1.17
LETMD1-216ENST00000548401 ZBTB1Q9Y2K1 713 aa22.36■■□□□ 1.17
LETMD1-216ENST00000548401 SLC15A2Q16348 729 aa22.35■■□□□ 1.17
LETMD1-216ENST00000548401 AK7Q96M32 723 aa22.35■■□□□ 1.17
LETMD1-216ENST00000548401 SCN7AQ01118 1682 aa22.34■■□□□ 1.17
LETMD1-216ENST00000548401 GNPATO15228 680 aa22.34■■□□□ 1.17
LETMD1-216ENST00000548401 STK32BQ9NY57 414 aa22.34■■□□□ 1.17
LETMD1-216ENST00000548401 ERBB4Q15303 1308 aa22.33■■□□□ 1.17
LETMD1-216ENST00000548401 BCORQ6W2J9 1755 aa22.33■■□□□ 1.17
LETMD1-216ENST00000548401 A1BGP04217 495 aa22.33■■□□□ 1.17
LETMD1-216ENST00000548401 TWISTNBQ3B726 338 aaPredicted RBP22.33■■□□□ 1.17
LETMD1-216ENST00000548401 YTHDC1Q96MU7 727 aaKnown RBP22.33■■□□□ 1.17
LETMD1-216ENST00000548401 PNPLA7Q6ZV29 1317 aa22.32■■□□□ 1.16
LETMD1-216ENST00000548401 NBPF26B4DH59 902 aa22.32■■□□□ 1.16
LETMD1-216ENST00000548401 ELL2O00472 640 aaPredicted RBP22.32■■□□□ 1.16
LETMD1-216ENST00000548401 NBPF14Q5TI25 921 aa22.32■■□□□ 1.16
LETMD1-216ENST00000548401 NBPF10Q6P3W6 841 aaKnown RBP22.32■■□□□ 1.16
LETMD1-216ENST00000548401 NBPF15Q8N660 670 aa22.32■■□□□ 1.16
LETMD1-216ENST00000548401 RPS6KA4O75676 772 aa22.31■■□□□ 1.16
LETMD1-216ENST00000548401 HDGFL1Q5TGJ6 251 aa22.31■■□□□ 1.16
LETMD1-216ENST00000548401 COL15A1P39059 1388 aa22.3■■□□□ 1.16
LETMD1-216ENST00000548401 SSFA2P28290 1259 aa22.3■■□□□ 1.16
LETMD1-216ENST00000548401 PIP4K2AP48426 406 aaPredicted RBP22.3■■□□□ 1.16
LETMD1-216ENST00000548401 SMIM5Q71RC9 77 aa22.3■■□□□ 1.16
LETMD1-216ENST00000548401 LRP10Q7Z4F1 713 aa22.3■■□□□ 1.16
LETMD1-216ENST00000548401 VAMP4O75379 141 aa22.29■■□□□ 1.16
LETMD1-216ENST00000548401 EIF2S2P20042 333 aaKnown RBP22.29■■□□□ 1.16
LETMD1-216ENST00000548401 PDIA6Q15084 440 aa22.29■■□□□ 1.16
LETMD1-216ENST00000548401 TFCP2L1Q9NZI6 479 aa22.29■■□□□ 1.16
LETMD1-216ENST00000548401 CANXP27824 592 aaKnown RBP22.28■■□□□ 1.16
LETMD1-216ENST00000548401 IL6STP40189 918 aaPredicted RBP22.28■■□□□ 1.16
LETMD1-216ENST00000548401 EIF5P55010 431 aaKnown RBP22.28■■□□□ 1.16
LETMD1-216ENST00000548401 PROSER3Q2NL68 480 aa22.28■■□□□ 1.16
LETMD1-216ENST00000548401 NECTIN2Q92692 538 aa22.28■■□□□ 1.16
LETMD1-216ENST00000548401 CHPF2Q9P2E5 772 aa22.28■■□□□ 1.16
LETMD1-216ENST00000548401 RTCBQ9Y3I0 505 aaKnown RBP22.28■■□□□ 1.16
LETMD1-216ENST00000548401 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.27■■□□□ 1.16
LETMD1-216ENST00000548401 ADRA2BP18089 450 aa22.27■■□□□ 1.16
LETMD1-216ENST00000548401 R3HDM1Q15032 1099 aaKnown RBP22.27■■□□□ 1.16
LETMD1-216ENST00000548401 COL24A1Q17RW2 1714 aa22.27■■□□□ 1.16
LETMD1-216ENST00000548401 CACNA1FO60840 1977 aa22.27■■□□□ 1.15
LETMD1-216ENST00000548401 PHF14O94880 888 aa22.26■■□□□ 1.15
LETMD1-216ENST00000548401 ANXA1P04083 346 aa22.25■■□□□ 1.15
LETMD1-216ENST00000548401 COL23A1Q86Y22 540 aaPredicted RBP22.25■■□□□ 1.15
LETMD1-216ENST00000548401 PDGFDQ9GZP0 370 aaPredicted RBP22.25■■□□□ 1.15
LETMD1-216ENST00000548401 DDX21Q9NR30 783 aaKnown RBP eCLIP22.25■■□□□ 1.15
LETMD1-216ENST00000548401 PSDA5PKW4 1024 aaPredicted RBP22.24■■□□□ 1.15
LETMD1-216ENST00000548401 CCDC30Q5VVM6 783 aa22.24■■□□□ 1.15
LETMD1-216ENST00000548401 DBF4Q9UBU7 674 aaPredicted RBP22.24■■□□□ 1.15
LETMD1-216ENST00000548401 CT47B1P0C2W7 299 aaPredicted RBP22.23■■□□□ 1.15
LETMD1-216ENST00000548401 FLAD1Q8NFF5 587 aa22.23■■□□□ 1.15
LETMD1-216ENST00000548401 ARHGEF1Q92888 912 aaKnown RBP22.23■■□□□ 1.15
LETMD1-216ENST00000548401 MYL6BP14649 208 aa22.22■■□□□ 1.15
LETMD1-216ENST00000548401 USP42Q9H9J4 1324 aaKnown RBP22.22■■□□□ 1.15
LETMD1-216ENST00000548401 ARFGEF2Q9Y6D5 1785 aa22.22■■□□□ 1.15
LETMD1-216ENST00000548401 CHMP4AQ9BY43 222 aa22.21■■□□□ 1.15
LETMD1-216ENST00000548401 TCERG1O14776 1098 aaKnown RBP22.2■■□□□ 1.14
LETMD1-216ENST00000548401 TRAPPC3LQ5T215 181 aa22.2■■□□□ 1.14
LETMD1-216ENST00000548401 ZNF428Q96B54 188 aa22.2■■□□□ 1.14
LETMD1-216ENST00000548401 ZNF330Q9Y3S2 320 aaPredicted RBP22.2■■□□□ 1.14
LETMD1-216ENST00000548401 SRP68Q9UHB9 627 aaKnown RBP22.19■■□□□ 1.14
LETMD1-216ENST00000548401 ANKRD36CQ5JPF3 1778 aa22.19■■□□□ 1.14
LETMD1-216ENST00000548401 A0A087WZG4 1122 aa22.18■■□□□ 1.14
LETMD1-216ENST00000548401 CAMTA2O94983 1202 aa22.18■■□□□ 1.14
LETMD1-216ENST00000548401 TTLL7Q6ZT98 887 aa22.18■■□□□ 1.14
LETMD1-216ENST00000548401 DZIP3Q86Y13 1208 aaKnown RBP22.18■■□□□ 1.14
LETMD1-216ENST00000548401 STK31Q9BXU1 1019 aa22.18■■□□□ 1.14
LETMD1-216ENST00000548401 HYPKQ9NX55 129 aa22.18■■□□□ 1.14
LETMD1-216ENST00000548401 NUP98P52948 1817 aa22.17■■□□□ 1.14
LETMD1-216ENST00000548401 RFC4P35249 363 aa22.17■■□□□ 1.14
LETMD1-216ENST00000548401 XAGE3Q8WTP9 111 aa22.17■■□□□ 1.14
LETMD1-216ENST00000548401 BCL2L12Q9HB09 334 aa22.17■■□□□ 1.14
LETMD1-216ENST00000548401 NARFQ9UHQ1 456 aa22.17■■□□□ 1.14
LETMD1-216ENST00000548401 SSH1Q8WYL5 1049 aa22.16■■□□□ 1.14
LETMD1-216ENST00000548401 PHAXQ9H814 394 aaKnown RBP22.16■■□□□ 1.14
LETMD1-216ENST00000548401 TBC1D2BQ9UPU7 963 aa22.16■■□□□ 1.14
LETMD1-216ENST00000548401 MAP3K15Q6ZN16 1313 aa22.15■■□□□ 1.14
LETMD1-216ENST00000548401 GYS1P13807 737 aa22.15■■□□□ 1.14
LETMD1-216ENST00000548401 RARSP54136 660 aaKnown RBP22.15■■□□□ 1.14
LETMD1-216ENST00000548401 ALDH1L2Q3SY69 923 aa22.15■■□□□ 1.14
LETMD1-216ENST00000548401 COPS6Q7L5N1 327 aa22.15■■□□□ 1.14
LETMD1-216ENST00000548401 G2E3Q7L622 706 aa22.15■■□□□ 1.14
LETMD1-216ENST00000548401 RGL2O15211 777 aa22.14■■□□□ 1.13
LETMD1-216ENST00000548401 USPL1Q5W0Q7 1092 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms