RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 AIDAQ96BJ3 306 aa6.75□□□□□ -1.33
HCFC2-203ENST00000547194 PRR12Q9ULL5 1215 aa6.75□□□□□ -1.33
HCFC2-203ENST00000547194 PCDHGC4Q9Y5F7 938 aa6.75□□□□□ -1.33
HCFC2-203ENST00000547194 MYCP01106 439 aaPredicted RBP6.74□□□□□ -1.33
HCFC2-203ENST00000547194 LRP8Q14114 963 aa6.74□□□□□ -1.33
HCFC2-203ENST00000547194 TBC1D9Q6ZT07 1266 aa6.74□□□□□ -1.33
HCFC2-203ENST00000547194 TRIM34Q9BYJ4 488 aa6.74□□□□□ -1.33
HCFC2-203ENST00000547194 FHDC1Q9C0D6 1143 aaPredicted RBP6.74□□□□□ -1.33
HCFC2-203ENST00000547194 GOPCQ9HD26 462 aa6.74□□□□□ -1.33
HCFC2-203ENST00000547194 MAPTP10636 758 aaKnown RBP6.73□□□□□ -1.33
HCFC2-203ENST00000547194 GRIK4Q16099 956 aa6.73□□□□□ -1.33
HCFC2-203ENST00000547194 IL27Q8NEV9 243 aa6.73□□□□□ -1.33
HCFC2-203ENST00000547194 RHBDD1Q8TEB9 315 aa6.73□□□□□ -1.33
HCFC2-203ENST00000547194 CDCA7Q9BWT1 371 aaPredicted RBP6.73□□□□□ -1.33
HCFC2-203ENST00000547194 SPDYE3A6NKU9 549 aa6.72□□□□□ -1.33
HCFC2-203ENST00000547194 HYAL3O43820 417 aaPredicted RBP6.72□□□□□ -1.33
HCFC2-203ENST00000547194 COBLO75128 1261 aa6.72□□□□□ -1.33
HCFC2-203ENST00000547194 RFC5P40937 340 aa6.72□□□□□ -1.33
HCFC2-203ENST00000547194 TLR1Q15399 786 aa6.72□□□□□ -1.33
HCFC2-203ENST00000547194 ARSJQ5FYB0 599 aaPredicted RBP6.72□□□□□ -1.33
HCFC2-203ENST00000547194 CCDC125Q86Z20 511 aa6.72□□□□□ -1.33
HCFC2-203ENST00000547194 XAGE2Q96GT9 111 aa6.72□□□□□ -1.33
HCFC2-203ENST00000547194 CRISPLD1Q9H336 500 aa6.72□□□□□ -1.33
HCFC2-203ENST00000547194 DNAAF2Q9NVR5 837 aaKnown RBP6.72□□□□□ -1.33
HCFC2-203ENST00000547194 HCN2Q9UL51 889 aa6.71□□□□□ -1.34
HCFC2-203ENST00000547194 PCMTD1Q96MG8 357 aaPredicted RBP6.7□□□□□ -1.34
HCFC2-203ENST00000547194 HRH3Q9Y5N1 445 aa6.7□□□□□ -1.34
HCFC2-203ENST00000547194 ALAS2P22557 587 aa6.69□□□□□ -1.34
HCFC2-203ENST00000547194 TNP2Q05952 138 aa6.69□□□□□ -1.34
HCFC2-203ENST00000547194 TRIM28Q13263 835 aaKnown RBP6.69□□□□□ -1.34
HCFC2-203ENST00000547194 ESCO1Q5FWF5 840 aa6.69□□□□□ -1.34
HCFC2-203ENST00000547194 C8orf86Q6ZUL3 223 aa6.69□□□□□ -1.34
HCFC2-203ENST00000547194 GJA3Q9Y6H8 435 aa6.69□□□□□ -1.34
HCFC2-203ENST00000547194 A0A1W2PNR3 127 aa6.68□□□□□ -1.34
HCFC2-203ENST00000547194 M0R082 166 aa6.68□□□□□ -1.34
HCFC2-203ENST00000547194 ATP4AP20648 1035 aa6.68□□□□□ -1.34
HCFC2-203ENST00000547194 ZNF417Q8TAU3 575 aa6.68□□□□□ -1.34
HCFC2-203ENST00000547194 NACC1Q96RE7 527 aa6.68□□□□□ -1.34
HCFC2-203ENST00000547194 ZNF587Q96SQ5 575 aaPredicted RBP6.68□□□□□ -1.34
HCFC2-203ENST00000547194 ETNK1Q9HBU6 452 aa6.68□□□□□ -1.34
HCFC2-203ENST00000547194 ELOA3CA0A087WX78 387 aaPredicted RBP6.67□□□□□ -1.34
HCFC2-203ENST00000547194 ELOA3DA6NLF2 546 aaPredicted RBP6.67□□□□□ -1.34
HCFC2-203ENST00000547194 ELOA3BQ3SY89 546 aa6.67□□□□□ -1.34
HCFC2-203ENST00000547194 ZNF468Q5VIY5 522 aaPredicted RBP6.67□□□□□ -1.34
HCFC2-203ENST00000547194 NLRP8Q86W28 1048 aa6.67□□□□□ -1.34
HCFC2-203ENST00000547194 PPARGC1BQ86YN6 1023 aaKnown RBP6.67□□□□□ -1.34
HCFC2-203ENST00000547194 ELOA3Q8NG57 546 aa6.67□□□□□ -1.34
HCFC2-203ENST00000547194 CCDC85AQ96PX6 553 aaPredicted RBP6.67□□□□□ -1.34
HCFC2-203ENST00000547194 STRN4Q9NRL3 753 aa6.67□□□□□ -1.34
HCFC2-203ENST00000547194 NR1H3Q13133 447 aa6.66□□□□□ -1.34
HCFC2-203ENST00000547194 SYT9Q86SS6 491 aa6.66□□□□□ -1.34
HCFC2-203ENST00000547194 AVENQ9NQS1 362 aaPredicted RBP6.66□□□□□ -1.34
HCFC2-203ENST00000547194 MCTP1Q6DN14 999 aa6.65□□□□□ -1.34
HCFC2-203ENST00000547194 TP53INP1Q96A56 240 aa6.65□□□□□ -1.34
HCFC2-203ENST00000547194 ZNF330Q9Y3S2 320 aaPredicted RBP6.65□□□□□ -1.34
HCFC2-203ENST00000547194 TMEM259Q4ZIN3 620 aa6.64□□□□□ -1.35
HCFC2-203ENST00000547194 FAM182BQ5T319 152 aa6.64□□□□□ -1.35
HCFC2-203ENST00000547194 MARK1Q9P0L2 795 aa6.64□□□□□ -1.35
HCFC2-203ENST00000547194 ALBP02768 609 aa6.63□□□□□ -1.35
HCFC2-203ENST00000547194 TRAPPC3LQ5T215 181 aa6.63□□□□□ -1.35
HCFC2-203ENST00000547194 BICDL1Q6ZP65 573 aa6.63□□□□□ -1.35
HCFC2-203ENST00000547194 MCCD1P59942 119 aaPredicted RBP6.62□□□□□ -1.35
HCFC2-203ENST00000547194 NBPF1Q3BBV0 1214 aa6.62□□□□□ -1.35
HCFC2-203ENST00000547194 TSGA10IPQ3SY00 556 aa6.62□□□□□ -1.35
HCFC2-203ENST00000547194 OXLD1Q5BKU9 147 aa6.62□□□□□ -1.35
HCFC2-203ENST00000547194 GJD4Q96KN9 370 aaPredicted RBP6.62□□□□□ -1.35
HCFC2-203ENST00000547194 NIFKQ9BYG3 293 aaKnown RBP6.62□□□□□ -1.35
HCFC2-203ENST00000547194 PAX4O43316 350 aa6.61□□□□□ -1.35
HCFC2-203ENST00000547194 H2AFB1P0C5Y9 115 aa6.61□□□□□ -1.35
HCFC2-203ENST00000547194 H2AFB2P0C5Z0 115 aa6.61□□□□□ -1.35
HCFC2-203ENST00000547194 TATP17735 454 aaPredicted RBP6.61□□□□□ -1.35
HCFC2-203ENST00000547194 MBTPS1Q14703 1052 aa6.61□□□□□ -1.35
HCFC2-203ENST00000547194 SHISA2Q6UWI4 295 aa6.61□□□□□ -1.35
HCFC2-203ENST00000547194 C1orf216Q8TAB5 229 aa6.61□□□□□ -1.35
HCFC2-203ENST00000547194 ZNF592Q92610 1267 aa6.61□□□□□ -1.35
HCFC2-203ENST00000547194 SERTAD1Q9UHV2 236 aa6.61□□□□□ -1.35
HCFC2-203ENST00000547194 C9orf172C9J069 976 aa6.6□□□□□ -1.35
HCFC2-203ENST00000547194 FAM157BP0CG42 384 aa6.6□□□□□ -1.35
HCFC2-203ENST00000547194 RAB44Q7Z6P3 723 aaPredicted RBP6.6□□□□□ -1.35
HCFC2-203ENST00000547194 ZIC5Q96T25 663 aa6.6□□□□□ -1.35
HCFC2-203ENST00000547194 USP21Q9UK80 565 aa6.6□□□□□ -1.35
HCFC2-203ENST00000547194 DOLKQ9UPQ8 538 aa6.6□□□□□ -1.35
HCFC2-203ENST00000547194 PARP3Q9Y6F1 533 aa6.6□□□□□ -1.35
HCFC2-203ENST00000547194 TBC1D8BQ0IIM8 1120 aa6.59□□□□□ -1.35
HCFC2-203ENST00000547194 COL9A3Q14050 684 aaPredicted RBP6.59□□□□□ -1.35
HCFC2-203ENST00000547194 ADGRE1Q14246 886 aa6.59□□□□□ -1.35
HCFC2-203ENST00000547194 TXNRD3Q86VQ6 643 aa6.59□□□□□ -1.35
HCFC2-203ENST00000547194 MICALL1Q8N3F8 863 aa6.59□□□□□ -1.35
HCFC2-203ENST00000547194 CABP1Q9NZU7 370 aa6.59□□□□□ -1.35
HCFC2-203ENST00000547194 CEP126Q9P2H0 1117 aa6.59□□□□□ -1.35
HCFC2-203ENST00000547194 STARD13Q9Y3M8 1113 aa6.59□□□□□ -1.35
HCFC2-203ENST00000547194 ELNP15502 786 aa6.58□□□□□ -1.36
HCFC2-203ENST00000547194 SELPP16109 830 aa6.58□□□□□ -1.36
HCFC2-203ENST00000547194 GDF10P55107 478 aa6.58□□□□□ -1.36
HCFC2-203ENST00000547194 NID1P14543 1247 aa6.57□□□□□ -1.36
HCFC2-203ENST00000547194 YBX3P16989 372 aaKnown RBP eCLIP6.57□□□□□ -1.36
HCFC2-203ENST00000547194 TXKP42681 527 aa6.57□□□□□ -1.36
HCFC2-203ENST00000547194 NRG1Q02297 640 aaPredicted RBP6.57□□□□□ -1.36
HCFC2-203ENST00000547194 USP4Q13107 963 aa6.57□□□□□ -1.36
HCFC2-203ENST00000547194 BANK1Q8NDB2 785 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms