RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PDGFDQ9GZP0 370 aaPredicted RBP18.89■□□□□ 0.61
DDX54-203ENST00000546869 MTFR1LQ9H019 292 aa18.89■□□□□ 0.61
DDX54-203ENST00000546869 IL16Q14005 1332 aa18.89■□□□□ 0.61
DDX54-203ENST00000546869 KDM3BQ7LBC6 1761 aa18.88■□□□□ 0.61
DDX54-203ENST00000546869 CASZ1Q86V15 1759 aa18.88■□□□□ 0.61
DDX54-203ENST00000546869 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.88■□□□□ 0.61
DDX54-203ENST00000546869 AMIGO3Q86WK7 504 aa18.88■□□□□ 0.61
DDX54-203ENST00000546869 USP16Q9Y5T5 823 aa18.88■□□□□ 0.61
DDX54-203ENST00000546869 SPON1Q9HCB6 807 aa18.86■□□□□ 0.61
DDX54-203ENST00000546869 UBR3Q6ZT12 1888 aa18.86■□□□□ 0.61
DDX54-203ENST00000546869 SOS1Q07889 1333 aaPredicted RBP18.85■□□□□ 0.61
DDX54-203ENST00000546869 HOXB7P09629 217 aa18.85■□□□□ 0.61
DDX54-203ENST00000546869 ARHGEF1Q92888 912 aaKnown RBP18.85■□□□□ 0.61
DDX54-203ENST00000546869 MBIPQ9NS73 344 aa18.85■□□□□ 0.61
DDX54-203ENST00000546869 ZBTB1Q9Y2K1 713 aa18.85■□□□□ 0.61
DDX54-203ENST00000546869 LAS1LQ9Y4W2 734 aaKnown RBP18.85■□□□□ 0.61
DDX54-203ENST00000546869 PRAMEF22A3QJZ6 481 aa18.84■□□□□ 0.61
DDX54-203ENST00000546869 IL6STP40189 918 aaPredicted RBP18.84■□□□□ 0.61
DDX54-203ENST00000546869 EIF5P55010 431 aaKnown RBP18.84■□□□□ 0.61
DDX54-203ENST00000546869 MYH14Q7Z406 1995 aaKnown RBP18.84■□□□□ 0.61
DDX54-203ENST00000546869 ZNF521Q96K83 1311 aa18.83■□□□□ 0.61
DDX54-203ENST00000546869 PHF14O94880 888 aa18.83■□□□□ 0.6
DDX54-203ENST00000546869 SGIP1Q9BQI5 828 aa18.83■□□□□ 0.6
DDX54-203ENST00000546869 TUBGCP6Q96RT7 1819 aa18.83■□□□□ 0.6
DDX54-203ENST00000546869 ERBB4Q15303 1308 aa18.82■□□□□ 0.6
DDX54-203ENST00000546869 A0A087WZG4 1122 aa18.82■□□□□ 0.6
DDX54-203ENST00000546869 ZBTB7AO95365 584 aa18.82■□□□□ 0.6
DDX54-203ENST00000546869 A1BGP04217 495 aa18.82■□□□□ 0.6
DDX54-203ENST00000546869 RFC4P35249 363 aa18.82■□□□□ 0.6
DDX54-203ENST00000546869 MSH5O43196 834 aa18.81■□□□□ 0.6
DDX54-203ENST00000546869 CANXP27824 592 aaKnown RBP18.81■□□□□ 0.6
DDX54-203ENST00000546869 PTGER2P43116 358 aa18.81■□□□□ 0.6
DDX54-203ENST00000546869 SMIM5Q71RC9 77 aa18.81■□□□□ 0.6
DDX54-203ENST00000546869 NLGN1Q8N2Q7 840 aa18.8■□□□□ 0.6
DDX54-203ENST00000546869 ATF5Q9Y2D1 282 aaPredicted RBP18.8■□□□□ 0.6
DDX54-203ENST00000546869 LRP5O75197 1615 aa18.8■□□□□ 0.6
DDX54-203ENST00000546869 USP42Q9H9J4 1324 aaKnown RBP18.79■□□□□ 0.6
DDX54-203ENST00000546869 SENP3-EIF4A1A0A087X0R7 540 aa18.79■□□□□ 0.6
DDX54-203ENST00000546869 NBPF26B4DH59 902 aa18.79■□□□□ 0.6
DDX54-203ENST00000546869 NBPF10Q6P3W6 841 aaKnown RBP18.79■□□□□ 0.6
DDX54-203ENST00000546869 NBPF15Q8N660 670 aa18.79■□□□□ 0.6
DDX54-203ENST00000546869 CHMP4AQ9BY43 222 aa18.79■□□□□ 0.6
DDX54-203ENST00000546869 NARFQ9UHQ1 456 aa18.79■□□□□ 0.6
DDX54-203ENST00000546869 SALL2Q9Y467 1007 aaPredicted RBP18.79■□□□□ 0.6
DDX54-203ENST00000546869 COL15A1P39059 1388 aa18.79■□□□□ 0.6
DDX54-203ENST00000546869 COL24A1Q17RW2 1714 aa18.78■□□□□ 0.6
DDX54-203ENST00000546869 RGL2O15211 777 aa18.78■□□□□ 0.6
DDX54-203ENST00000546869 ZPR1O75312 459 aa18.77■□□□□ 0.6
DDX54-203ENST00000546869 GYS1P13807 737 aa18.77■□□□□ 0.6
DDX54-203ENST00000546869 POLD1P28340 1107 aa18.77■□□□□ 0.6
DDX54-203ENST00000546869 DUSP27Q5VZP5 1158 aa18.77■□□□□ 0.6
DDX54-203ENST00000546869 NPM2Q86SE8 214 aaKnown RBP18.77■□□□□ 0.6
DDX54-203ENST00000546869 KRT24Q2M2I5 525 aa18.76■□□□□ 0.59
DDX54-203ENST00000546869 MYH16Q9H6N6 1097 aa18.76■□□□□ 0.59
DDX54-203ENST00000546869 PDIA6Q15084 440 aa18.75■□□□□ 0.59
DDX54-203ENST00000546869 LAMB4A4D0S4 1761 aa18.75■□□□□ 0.59
DDX54-203ENST00000546869 EIF2S2P20042 333 aaKnown RBP18.74■□□□□ 0.59
DDX54-203ENST00000546869 GOLGA2Q08379 1002 aa18.74■□□□□ 0.59
DDX54-203ENST00000546869 C8orf58Q8NAV2 365 aa18.74■□□□□ 0.59
DDX54-203ENST00000546869 TSR2Q969E8 191 aaKnown RBP18.74■□□□□ 0.59
DDX54-203ENST00000546869 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
DDX54-203ENST00000546869 FANCIQ9NVI1 1328 aa18.74■□□□□ 0.59
DDX54-203ENST00000546869 HDGFL1Q5TGJ6 251 aa18.73■□□□□ 0.59
DDX54-203ENST00000546869 USPL1Q5W0Q7 1092 aa18.73■□□□□ 0.59
DDX54-203ENST00000546869 CLEC4GQ6UXB4 293 aa18.73■□□□□ 0.59
DDX54-203ENST00000546869 LRP10Q7Z4F1 713 aa18.73■□□□□ 0.59
DDX54-203ENST00000546869 ARXQ96QS3 562 aa18.73■□□□□ 0.59
DDX54-203ENST00000546869 DDX21Q9NR30 783 aaKnown RBP eCLIP18.73■□□□□ 0.59
DDX54-203ENST00000546869 SRP68Q9UHB9 627 aaKnown RBP18.73■□□□□ 0.59
DDX54-203ENST00000546869 E9PSI1 815 aa18.72■□□□□ 0.59
DDX54-203ENST00000546869 TM4SF1P30408 202 aa18.72■□□□□ 0.59
DDX54-203ENST00000546869 PIP4K2AP48426 406 aaPredicted RBP18.72■□□□□ 0.59
DDX54-203ENST00000546869 DZIP3Q86Y13 1208 aaKnown RBP18.72■□□□□ 0.59
DDX54-203ENST00000546869 BCL2L12Q9HB09 334 aa18.72■□□□□ 0.59
DDX54-203ENST00000546869 DBF4Q9UBU7 674 aaPredicted RBP18.72■□□□□ 0.59
DDX54-203ENST00000546869 CAMTA2O94983 1202 aa18.71■□□□□ 0.59
DDX54-203ENST00000546869 FKBP8Q14318 412 aa18.71■□□□□ 0.59
DDX54-203ENST00000546869 MSL1Q68DK7 614 aa18.71■□□□□ 0.59
DDX54-203ENST00000546869 TBC1D2BQ9UPU7 963 aa18.71■□□□□ 0.59
DDX54-203ENST00000546869 C4AP0C0L4 1744 aa18.71■□□□□ 0.59
DDX54-203ENST00000546869 ERVV-1B6SEH8 477 aa18.7■□□□□ 0.58
DDX54-203ENST00000546869 SLFN5Q08AF3 891 aa18.7■□□□□ 0.58
DDX54-203ENST00000546869 TSPYL6Q8N831 410 aa18.7■□□□□ 0.58
DDX54-203ENST00000546869 ZNF330Q9Y3S2 320 aaPredicted RBP18.7■□□□□ 0.58
DDX54-203ENST00000546869 ELL2O00472 640 aaPredicted RBP18.69■□□□□ 0.58
DDX54-203ENST00000546869 MMP10P09238 476 aa18.69■□□□□ 0.58
DDX54-203ENST00000546869 MYL6BP14649 208 aa18.69■□□□□ 0.58
DDX54-203ENST00000546869 TWISTNBQ3B726 338 aaPredicted RBP18.69■□□□□ 0.58
DDX54-203ENST00000546869 CCDC30Q5VVM6 783 aa18.69■□□□□ 0.58
DDX54-203ENST00000546869 TRMT2AQ8IZ69 625 aaKnown RBP18.69■□□□□ 0.58
DDX54-203ENST00000546869 HYPKQ9NX55 129 aa18.69■□□□□ 0.58
DDX54-203ENST00000546869 PPP1R1BQ9UD71 204 aaPredicted RBP18.69■□□□□ 0.58
DDX54-203ENST00000546869 VAMP4O75379 141 aa18.67■□□□□ 0.58
DDX54-203ENST00000546869 EXOSC9Q06265 439 aaKnown RBP18.67■□□□□ 0.58
DDX54-203ENST00000546869 PROSER3Q2NL68 480 aa18.67■□□□□ 0.58
DDX54-203ENST00000546869 CHPF2Q9P2E5 772 aa18.67■□□□□ 0.58
DDX54-203ENST00000546869 ZNF652Q9Y2D9 606 aa18.67■□□□□ 0.58
DDX54-203ENST00000546869 PARP3Q9Y6F1 533 aa18.67■□□□□ 0.58
DDX54-203ENST00000546869 NFIXQ14938 502 aa18.66■□□□□ 0.58
DDX54-203ENST00000546869 KIF6Q6ZMV9 814 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms