RNA–Protein interactions for RNA: ENST00000546508.1

LINC00609-201, long intergenic non-protein coding RNA 609, humanhuman

TSL 3 BASIC

Gene LINC00609, Length 583 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00609-201ENST00000546508 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
LINC00609-201ENST00000546508 R3HDM1Q15032 1099 aaKnown RBP13.25□□□□□ -0.29
LINC00609-201ENST00000546508 SLC15A2Q16348 729 aa13.25□□□□□ -0.29
LINC00609-201ENST00000546508 TEX13AQ9BXU3 409 aaPredicted RBP13.25□□□□□ -0.29
LINC00609-201ENST00000546508 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
LINC00609-201ENST00000546508 ZNF521Q96K83 1311 aa13.24□□□□□ -0.29
LINC00609-201ENST00000546508 CNTNAP4Q9C0A0 1308 aa13.24□□□□□ -0.29
LINC00609-201ENST00000546508 MYH14Q7Z406 1995 aaKnown RBP13.24□□□□□ -0.29
LINC00609-201ENST00000546508 PRAMEF22A3QJZ6 481 aa13.24□□□□□ -0.29
LINC00609-201ENST00000546508 PSDA5PKW4 1024 aaPredicted RBP13.24□□□□□ -0.29
LINC00609-201ENST00000546508 GNPATO15228 680 aa13.24□□□□□ -0.29
LINC00609-201ENST00000546508 CRKLP46109 303 aaKnown RBP13.24□□□□□ -0.29
LINC00609-201ENST00000546508 TSR2Q969E8 191 aaKnown RBP13.24□□□□□ -0.29
LINC00609-201ENST00000546508 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
LINC00609-201ENST00000546508 UBR3Q6ZT12 1888 aa13.24□□□□□ -0.29
LINC00609-201ENST00000546508 QSER1Q2KHR3 1735 aa13.24□□□□□ -0.29
LINC00609-201ENST00000546508 PHF14O94880 888 aa13.23□□□□□ -0.29
LINC00609-201ENST00000546508 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
LINC00609-201ENST00000546508 GOLGA2Q08379 1002 aa13.23□□□□□ -0.29
LINC00609-201ENST00000546508 KRT24Q2M2I5 525 aa13.23□□□□□ -0.29
LINC00609-201ENST00000546508 MYH16Q9H6N6 1097 aa13.23□□□□□ -0.29
LINC00609-201ENST00000546508 CCDC87Q9NVE4 849 aa13.23□□□□□ -0.29
LINC00609-201ENST00000546508 FANCIQ9NVI1 1328 aa13.22□□□□□ -0.29
LINC00609-201ENST00000546508 GIGYF1O75420 1035 aaPredicted RBP13.22□□□□□ -0.29
LINC00609-201ENST00000546508 RC3H1Q5TC82 1133 aaKnown RBP13.22□□□□□ -0.29
LINC00609-201ENST00000546508 RTCBQ9Y3I0 505 aaKnown RBP13.22□□□□□ -0.29
LINC00609-201ENST00000546508 USP16Q9Y5T5 823 aa13.22□□□□□ -0.29
LINC00609-201ENST00000546508 SPINK5Q9NQ38 1064 aaPredicted RBP13.21□□□□□ -0.29
LINC00609-201ENST00000546508 ZBTB1Q9Y2K1 713 aa13.21□□□□□ -0.29
LINC00609-201ENST00000546508 ZNF330Q9Y3S2 320 aaPredicted RBP13.21□□□□□ -0.29
LINC00609-201ENST00000546508 PNPLA7Q6ZV29 1317 aa13.2□□□□□ -0.3
LINC00609-201ENST00000546508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.2□□□□□ -0.3
LINC00609-201ENST00000546508 E9PSI1 815 aa13.2□□□□□ -0.3
LINC00609-201ENST00000546508 ELL2O00472 640 aaPredicted RBP13.2□□□□□ -0.3
LINC00609-201ENST00000546508 EIF2S2P20042 333 aaKnown RBP13.2□□□□□ -0.3
LINC00609-201ENST00000546508 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
LINC00609-201ENST00000546508 SSFA2P28290 1259 aa13.2□□□□□ -0.3
LINC00609-201ENST00000546508 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
LINC00609-201ENST00000546508 DUSP27Q5VZP5 1158 aa13.2□□□□□ -0.3
LINC00609-201ENST00000546508 INTS5Q6P9B9 1019 aaKnown RBP13.2□□□□□ -0.3
LINC00609-201ENST00000546508 SMIM5Q71RC9 77 aa13.2□□□□□ -0.3
LINC00609-201ENST00000546508 NECTIN2Q92692 538 aa13.2□□□□□ -0.3
LINC00609-201ENST00000546508 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
LINC00609-201ENST00000546508 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
LINC00609-201ENST00000546508 RPS6KA4O75676 772 aa13.19□□□□□ -0.3
LINC00609-201ENST00000546508 A1BGP04217 495 aa13.19□□□□□ -0.3
LINC00609-201ENST00000546508 NPM2Q86SE8 214 aaKnown RBP13.19□□□□□ -0.3
LINC00609-201ENST00000546508 AMIGO3Q86WK7 504 aa13.19□□□□□ -0.3
LINC00609-201ENST00000546508 FLAD1Q8NFF5 587 aa13.19□□□□□ -0.3
LINC00609-201ENST00000546508 COL15A1P39059 1388 aa13.19□□□□□ -0.3
LINC00609-201ENST00000546508 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
LINC00609-201ENST00000546508 ZBED9Q6R2W3 1325 aa13.18□□□□□ -0.3
LINC00609-201ENST00000546508 HDGFL1Q5TGJ6 251 aa13.18□□□□□ -0.3
LINC00609-201ENST00000546508 COL23A1Q86Y22 540 aaPredicted RBP13.18□□□□□ -0.3
LINC00609-201ENST00000546508 C8orf58Q8NAV2 365 aa13.18□□□□□ -0.3
LINC00609-201ENST00000546508 CDCA7LQ96GN5 454 aa13.18□□□□□ -0.3
LINC00609-201ENST00000546508 PDGFDQ9GZP0 370 aaPredicted RBP13.18□□□□□ -0.3
LINC00609-201ENST00000546508 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
LINC00609-201ENST00000546508 HOXB7P09629 217 aa13.17□□□□□ -0.3
LINC00609-201ENST00000546508 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
LINC00609-201ENST00000546508 SLFN5Q08AF3 891 aa13.17□□□□□ -0.3
LINC00609-201ENST00000546508 TWISTNBQ3B726 338 aaPredicted RBP13.17□□□□□ -0.3
LINC00609-201ENST00000546508 TRAPPC3LQ5T215 181 aa13.17□□□□□ -0.3
LINC00609-201ENST00000546508 YTHDC1Q96MU7 727 aaKnown RBP13.17□□□□□ -0.3
LINC00609-201ENST00000546508 MYL6BP14649 208 aa13.16□□□□□ -0.3
LINC00609-201ENST00000546508 RFC4P35249 363 aa13.16□□□□□ -0.3
LINC00609-201ENST00000546508 IL6STP40189 918 aaPredicted RBP13.16□□□□□ -0.3
LINC00609-201ENST00000546508 TSPYL6Q8N831 410 aa13.16□□□□□ -0.3
LINC00609-201ENST00000546508 ARXQ96QS3 562 aa13.16□□□□□ -0.3
LINC00609-201ENST00000546508 ERBB4Q15303 1308 aa13.15□□□□□ -0.3
LINC00609-201ENST00000546508 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
LINC00609-201ENST00000546508 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
LINC00609-201ENST00000546508 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
LINC00609-201ENST00000546508 ARHGEF1Q92888 912 aaKnown RBP13.15□□□□□ -0.3
LINC00609-201ENST00000546508 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
LINC00609-201ENST00000546508 A0A087WZG4 1122 aa13.14□□□□□ -0.31
LINC00609-201ENST00000546508 ZBTB7AO95365 584 aa13.14□□□□□ -0.31
LINC00609-201ENST00000546508 ANXA1P04083 346 aa13.14□□□□□ -0.31
LINC00609-201ENST00000546508 EIF5P55010 431 aaKnown RBP13.14□□□□□ -0.31
LINC00609-201ENST00000546508 CHMP4AQ9BY43 222 aa13.14□□□□□ -0.31
LINC00609-201ENST00000546508 SCN7AQ01118 1682 aa13.14□□□□□ -0.31
LINC00609-201ENST00000546508 BCORQ6W2J9 1755 aa13.13□□□□□ -0.31
LINC00609-201ENST00000546508 ZPR1O75312 459 aa13.13□□□□□ -0.31
LINC00609-201ENST00000546508 PROSER3Q2NL68 480 aa13.13□□□□□ -0.31
LINC00609-201ENST00000546508 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
LINC00609-201ENST00000546508 MSL1Q68DK7 614 aa13.13□□□□□ -0.31
LINC00609-201ENST00000546508 DZIP3Q86Y13 1208 aaKnown RBP13.13□□□□□ -0.31
LINC00609-201ENST00000546508 SLC16A10Q8TF71 515 aa13.13□□□□□ -0.31
LINC00609-201ENST00000546508 SRP68Q9UHB9 627 aaKnown RBP13.13□□□□□ -0.31
LINC00609-201ENST00000546508 TBC1D2BQ9UPU7 963 aa13.13□□□□□ -0.31
LINC00609-201ENST00000546508 USP42Q9H9J4 1324 aaKnown RBP13.13□□□□□ -0.31
LINC00609-201ENST00000546508 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
LINC00609-201ENST00000546508 CAPN15O75808 1086 aa13.12□□□□□ -0.31
LINC00609-201ENST00000546508 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
LINC00609-201ENST00000546508 MTFR1LQ9H019 292 aa13.12□□□□□ -0.31
LINC00609-201ENST00000546508 DDX21Q9NR30 783 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC00609-201ENST00000546508 DBF4Q9UBU7 674 aaPredicted RBP13.12□□□□□ -0.31
LINC00609-201ENST00000546508 VAMP4O75379 141 aa13.11□□□□□ -0.31
LINC00609-201ENST00000546508 AIMP1Q12904 312 aaKnown RBP13.11□□□□□ -0.31
LINC00609-201ENST00000546508 PDIA6Q15084 440 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms