RNA–Protein interactions for RNA: ENST00000546284.1

AP002840.1-201, humanhuman

TSL 3 BASIC

Gene AP002840.1, Length 524 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002840.1-201ENST00000546284 VAMP4O75379 141 aa12.8□□□□□ -0.36
AP002840.1-201ENST00000546284 EIF2S2P20042 333 aaKnown RBP12.8□□□□□ -0.36
AP002840.1-201ENST00000546284 NECTIN2Q92692 538 aa12.8□□□□□ -0.36
AP002840.1-201ENST00000546284 TEX13AQ9BXU3 409 aaPredicted RBP12.8□□□□□ -0.36
AP002840.1-201ENST00000546284 SOS1Q07889 1333 aaPredicted RBP12.8□□□□□ -0.36
AP002840.1-201ENST00000546284 C4BP0C0L5 1744 aa12.79□□□□□ -0.36
AP002840.1-201ENST00000546284 STARD3NLO95772 234 aa12.79□□□□□ -0.36
AP002840.1-201ENST00000546284 CRKLP46109 303 aaKnown RBP12.79□□□□□ -0.36
AP002840.1-201ENST00000546284 HDGFL1Q5TGJ6 251 aa12.79□□□□□ -0.36
AP002840.1-201ENST00000546284 MYH14Q7Z406 1995 aaKnown RBP12.79□□□□□ -0.36
AP002840.1-201ENST00000546284 A1BGP04217 495 aa12.78□□□□□ -0.36
AP002840.1-201ENST00000546284 PIP4K2AP48426 406 aaPredicted RBP12.78□□□□□ -0.36
AP002840.1-201ENST00000546284 INTS5Q6P9B9 1019 aaKnown RBP12.78□□□□□ -0.36
AP002840.1-201ENST00000546284 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
AP002840.1-201ENST00000546284 CNTNAP4Q9C0A0 1308 aa12.78□□□□□ -0.36
AP002840.1-201ENST00000546284 NBPF26B4DH59 902 aa12.77□□□□□ -0.37
AP002840.1-201ENST00000546284 TCERG1O14776 1098 aaKnown RBP12.77□□□□□ -0.37
AP002840.1-201ENST00000546284 CT47B1P0C2W7 299 aaPredicted RBP12.77□□□□□ -0.37
AP002840.1-201ENST00000546284 PDIA6Q15084 440 aa12.77□□□□□ -0.37
AP002840.1-201ENST00000546284 NBPF14Q5TI25 921 aa12.77□□□□□ -0.37
AP002840.1-201ENST00000546284 NBPF10Q6P3W6 841 aaKnown RBP12.77□□□□□ -0.37
AP002840.1-201ENST00000546284 NBPF15Q8N660 670 aa12.77□□□□□ -0.37
AP002840.1-201ENST00000546284 CHPF2Q9P2E5 772 aa12.77□□□□□ -0.37
AP002840.1-201ENST00000546284 ZBTB1Q9Y2K1 713 aa12.77□□□□□ -0.37
AP002840.1-201ENST00000546284 ANXA1P04083 346 aa12.76□□□□□ -0.37
AP002840.1-201ENST00000546284 CANXP27824 592 aaKnown RBP12.76□□□□□ -0.37
AP002840.1-201ENST00000546284 ZNF827Q17R98 1081 aa12.76□□□□□ -0.37
AP002840.1-201ENST00000546284 PROSER3Q2NL68 480 aa12.76□□□□□ -0.37
AP002840.1-201ENST00000546284 RC3H1Q5TC82 1133 aaKnown RBP12.76□□□□□ -0.37
AP002840.1-201ENST00000546284 CCDC30Q5VVM6 783 aa12.76□□□□□ -0.37
AP002840.1-201ENST00000546284 AKT1S1Q96B36 256 aa12.76□□□□□ -0.37
AP002840.1-201ENST00000546284 ANO8Q9HCE9 1232 aaPredicted RBP12.76□□□□□ -0.37
AP002840.1-201ENST00000546284 GNPATO15228 680 aa12.75□□□□□ -0.37
AP002840.1-201ENST00000546284 MYL6BP14649 208 aa12.75□□□□□ -0.37
AP002840.1-201ENST00000546284 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
AP002840.1-201ENST00000546284 AMIGO3Q86WK7 504 aa12.75□□□□□ -0.37
AP002840.1-201ENST00000546284 AK7Q96M32 723 aa12.75□□□□□ -0.37
AP002840.1-201ENST00000546284 UBR3Q6ZT12 1888 aa12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 HMGB2P26583 209 aaKnown RBP12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 RARSP54136 660 aaKnown RBP12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 SMIM5Q71RC9 77 aa12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 LRP10Q7Z4F1 713 aa12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 ZNF428Q96B54 188 aa12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 BCL2L13Q9BXK5 485 aa12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 STK31Q9BXU1 1019 aa12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 CHMP4AQ9BY43 222 aa12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 DDX21Q9NR30 783 aaKnown RBP eCLIP12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 DBF4Q9UBU7 674 aaPredicted RBP12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 ZNF330Q9Y3S2 320 aaPredicted RBP12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 TUBGCP6Q96RT7 1819 aa12.74□□□□□ -0.37
AP002840.1-201ENST00000546284 RPS6KA4O75676 772 aa12.73□□□□□ -0.37
AP002840.1-201ENST00000546284 IL6STP40189 918 aaPredicted RBP12.73□□□□□ -0.37
AP002840.1-201ENST00000546284 EIF5P55010 431 aaKnown RBP12.73□□□□□ -0.37
AP002840.1-201ENST00000546284 ALDH1L2Q3SY69 923 aa12.73□□□□□ -0.37
AP002840.1-201ENST00000546284 STK32BQ9NY57 414 aa12.73□□□□□ -0.37
AP002840.1-201ENST00000546284 COL15A1P39059 1388 aa12.72□□□□□ -0.37
AP002840.1-201ENST00000546284 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
AP002840.1-201ENST00000546284 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
AP002840.1-201ENST00000546284 MRPL50Q8N5N7 158 aaKnown RBP12.72□□□□□ -0.37
AP002840.1-201ENST00000546284 SMC4Q9NTJ3 1288 aa12.72□□□□□ -0.37
AP002840.1-201ENST00000546284 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
AP002840.1-201ENST00000546284 TFCP2L1Q9NZI6 479 aa12.72□□□□□ -0.37
AP002840.1-201ENST00000546284 RTCBQ9Y3I0 505 aaKnown RBP12.72□□□□□ -0.37
AP002840.1-201ENST00000546284 BCAR3O75815 825 aa12.71□□□□□ -0.37
AP002840.1-201ENST00000546284 PHF14O94880 888 aa12.71□□□□□ -0.37
AP002840.1-201ENST00000546284 SSFA2P28290 1259 aa12.71□□□□□ -0.37
AP002840.1-201ENST00000546284 G2E3Q7L622 706 aa12.71□□□□□ -0.37
AP002840.1-201ENST00000546284 PHAXQ9H814 394 aaKnown RBP12.71□□□□□ -0.37
AP002840.1-201ENST00000546284 RCAN3Q9UKA8 241 aa12.71□□□□□ -0.37
AP002840.1-201ENST00000546284 C4AP0C0L4 1744 aa12.71□□□□□ -0.38
AP002840.1-201ENST00000546284 PNPLA7Q6ZV29 1317 aa12.7□□□□□ -0.38
AP002840.1-201ENST00000546284 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.7□□□□□ -0.38
AP002840.1-201ENST00000546284 TTLL7Q6ZT98 887 aa12.7□□□□□ -0.38
AP002840.1-201ENST00000546284 XAGE3Q8WTP9 111 aa12.7□□□□□ -0.38
AP002840.1-201ENST00000546284 CACNA1FO60840 1977 aa12.7□□□□□ -0.38
AP002840.1-201ENST00000546284 QSER1Q2KHR3 1735 aa12.69□□□□□ -0.38
AP002840.1-201ENST00000546284 ADRA2BP18089 450 aa12.69□□□□□ -0.38
AP002840.1-201ENST00000546284 AIMP1Q12904 312 aaKnown RBP12.69□□□□□ -0.38
AP002840.1-201ENST00000546284 FLIIQ13045 1269 aa12.69□□□□□ -0.38
AP002840.1-201ENST00000546284 TRAPPC3LQ5T215 181 aa12.69□□□□□ -0.38
AP002840.1-201ENST00000546284 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
AP002840.1-201ENST00000546284 ARHGEF1Q92888 912 aaKnown RBP12.69□□□□□ -0.38
AP002840.1-201ENST00000546284 BRPF1P55201 1214 aaPredicted RBP12.68□□□□□ -0.38
AP002840.1-201ENST00000546284 NPM2Q86SE8 214 aaKnown RBP12.68□□□□□ -0.38
AP002840.1-201ENST00000546284 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
AP002840.1-201ENST00000546284 COL23A1Q86Y22 540 aaPredicted RBP12.68□□□□□ -0.38
AP002840.1-201ENST00000546284 ARXQ96QS3 562 aa12.68□□□□□ -0.38
AP002840.1-201ENST00000546284 TBC1D2BQ9UPU7 963 aa12.68□□□□□ -0.38
AP002840.1-201ENST00000546284 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
AP002840.1-201ENST00000546284 KIF16BQ96L93 1317 aa12.67□□□□□ -0.38
AP002840.1-201ENST00000546284 A0A087WZG4 1122 aa12.67□□□□□ -0.38
AP002840.1-201ENST00000546284 ZBTB3Q9H5J0 574 aa12.67□□□□□ -0.38
AP002840.1-201ENST00000546284 SRP68Q9UHB9 627 aaKnown RBP12.67□□□□□ -0.38
AP002840.1-201ENST00000546284 NOB1Q9ULX3 412 aaKnown RBP12.67□□□□□ -0.38
AP002840.1-201ENST00000546284 ADCY9O60503 1353 aa12.67□□□□□ -0.38
AP002840.1-201ENST00000546284 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
AP002840.1-201ENST00000546284 MAP3K15Q6ZN16 1313 aa12.66□□□□□ -0.38
AP002840.1-201ENST00000546284 USP42Q9H9J4 1324 aaKnown RBP12.66□□□□□ -0.38
AP002840.1-201ENST00000546284 CAMTA2O94983 1202 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms