RNA–Protein interactions for RNA: ENST00000546155.5

LTBP4-206, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-206ENST00000546155 PRAMEF22A3QJZ6 481 aa26.55■■□□□ 1.84
LTBP4-206ENST00000546155 RIPK4P57078 832 aa26.55■■□□□ 1.84
LTBP4-206ENST00000546155 GPR162Q16538 588 aa26.55■■□□□ 1.84
LTBP4-206ENST00000546155 ADAMTS8Q9UP79 889 aa26.55■■□□□ 1.84
LTBP4-206ENST00000546155 ZNF330Q9Y3S2 320 aaPredicted RBP26.55■■□□□ 1.84
LTBP4-206ENST00000546155 VIRMAQ69YN4 1812 aaKnown RBP26.55■■□□□ 1.84
LTBP4-206ENST00000546155 MYH14Q7Z406 1995 aaKnown RBP26.55■■□□□ 1.84
LTBP4-206ENST00000546155 COL24A1Q17RW2 1714 aa26.54■■□□□ 1.84
LTBP4-206ENST00000546155 FKBP8Q14318 412 aa26.54■■□□□ 1.84
LTBP4-206ENST00000546155 NEUROD2Q15784 382 aa26.54■■□□□ 1.84
LTBP4-206ENST00000546155 ZPR1O75312 459 aa26.53■■□□□ 1.84
LTBP4-206ENST00000546155 A1BGP04217 495 aa26.53■■□□□ 1.84
LTBP4-206ENST00000546155 USPL1Q5W0Q7 1092 aa26.53■■□□□ 1.84
LTBP4-206ENST00000546155 TEX13AQ9BXU3 409 aaPredicted RBP26.53■■□□□ 1.84
LTBP4-206ENST00000546155 USP42Q9H9J4 1324 aaKnown RBP26.53■■□□□ 1.84
LTBP4-206ENST00000546155 WWC3Q9ULE0 1092 aa26.52■■□□□ 1.84
LTBP4-206ENST00000546155 CD2APQ9Y5K6 639 aa26.52■■□□□ 1.84
LTBP4-206ENST00000546155 USP16Q9Y5T5 823 aa26.52■■□□□ 1.84
LTBP4-206ENST00000546155 TMPOP42166 694 aaKnown RBP26.51■■□□□ 1.83
LTBP4-206ENST00000546155 PIP4K2AP48426 406 aaPredicted RBP26.51■■□□□ 1.83
LTBP4-206ENST00000546155 PARP3Q9Y6F1 533 aa26.5■■□□□ 1.83
LTBP4-206ENST00000546155 COL15A1P39059 1388 aa26.49■■□□□ 1.83
LTBP4-206ENST00000546155 RUNDC1Q96C34 613 aa26.49■■□□□ 1.83
LTBP4-206ENST00000546155 SNRPA1P09661 255 aaKnown RBP26.48■■□□□ 1.83
LTBP4-206ENST00000546155 SIPA1L3O60292 1781 aaPredicted RBP26.48■■□□□ 1.83
LTBP4-206ENST00000546155 CICQ96RK0 1608 aaPredicted RBP26.47■■□□□ 1.83
LTBP4-206ENST00000546155 EIF5P55010 431 aaKnown RBP26.47■■□□□ 1.83
LTBP4-206ENST00000546155 PNISRQ8TF01 805 aaKnown RBP26.47■■□□□ 1.83
LTBP4-206ENST00000546155 NARFQ9UHQ1 456 aa26.47■■□□□ 1.83
LTBP4-206ENST00000546155 UBR2Q8IWV8 1755 aa26.47■■□□□ 1.83
LTBP4-206ENST00000546155 DLG5Q8TDM6 1919 aa26.47■■□□□ 1.83
LTBP4-206ENST00000546155 YY1P25490 414 aa26.46■■□□□ 1.83
LTBP4-206ENST00000546155 DDR1Q08345 913 aa26.45■■□□□ 1.82
LTBP4-206ENST00000546155 TBC1D2BQ9UPU7 963 aa26.45■■□□□ 1.82
LTBP4-206ENST00000546155 YBX3P16989 372 aaKnown RBP eCLIP26.44■■□□□ 1.826e-6■□□□□ 10.6
LTBP4-206ENST00000546155 NPM2Q86SE8 214 aaKnown RBP26.44■■□□□ 1.82
LTBP4-206ENST00000546155 BCL2L12Q9HB09 334 aa26.44■■□□□ 1.82
LTBP4-206ENST00000546155 MRS2Q9HD23 443 aa26.44■■□□□ 1.82
LTBP4-206ENST00000546155 A0A087WZG4 1122 aa26.43■■□□□ 1.82
LTBP4-206ENST00000546155 BICDL1Q6ZP65 573 aa26.43■■□□□ 1.82
LTBP4-206ENST00000546155 IL6STP40189 918 aaPredicted RBP26.42■■□□□ 1.82
LTBP4-206ENST00000546155 EIF4A1P60842 406 aaKnown RBP26.42■■□□□ 1.82
LTBP4-206ENST00000546155 LMOD3Q0VAK6 560 aa26.42■■□□□ 1.82
LTBP4-206ENST00000546155 TSPYL4Q9UJ04 414 aa26.42■■□□□ 1.82
LTBP4-206ENST00000546155 C4AP0C0L4 1744 aa26.42■■□□□ 1.82
LTBP4-206ENST00000546155 TM4SF1P30408 202 aa26.41■■□□□ 1.82
LTBP4-206ENST00000546155 NFIXQ14938 502 aa26.41■■□□□ 1.82
LTBP4-206ENST00000546155 POLRMTO00411 1230 aaKnown RBP26.4■■□□□ 1.82
LTBP4-206ENST00000546155 DIEXFQ68CQ4 756 aaKnown RBP26.4■■□□□ 1.82
LTBP4-206ENST00000546155 LAS1LQ9Y4W2 734 aaKnown RBP26.4■■□□□ 1.82
LTBP4-206ENST00000546155 A0A0G2JLW4 131 aa26.39■■□□□ 1.82
LTBP4-206ENST00000546155 TRIM35Q9UPQ4 493 aa26.39■■□□□ 1.82
LTBP4-206ENST00000546155 SENP3-EIF4A1A0A087X0R7 540 aa26.38■■□□□ 1.81
LTBP4-206ENST00000546155 NBPF26B4DH59 902 aa26.37■■□□□ 1.81
LTBP4-206ENST00000546155 APAF1O14727 1248 aa26.37■■□□□ 1.81
LTBP4-206ENST00000546155 GIGYF1O75420 1035 aaPredicted RBP26.37■■□□□ 1.81
LTBP4-206ENST00000546155 NBPF10Q6P3W6 841 aaKnown RBP26.37■■□□□ 1.81
LTBP4-206ENST00000546155 DZIP3Q86Y13 1208 aaKnown RBP26.37■■□□□ 1.81
LTBP4-206ENST00000546155 NGEFQ8N5V2 710 aa26.37■■□□□ 1.81
LTBP4-206ENST00000546155 NBPF15Q8N660 670 aa26.37■■□□□ 1.81
LTBP4-206ENST00000546155 DPEP1P16444 411 aa26.36■■□□□ 1.81
LTBP4-206ENST00000546155 TBC1D9BQ66K14 1250 aa26.36■■□□□ 1.81
LTBP4-206ENST00000546155 C10orf71Q711Q0 1435 aa26.35■■□□□ 1.81
LTBP4-206ENST00000546155 CAMTA2O94983 1202 aa26.34■■□□□ 1.81
LTBP4-206ENST00000546155 SERPINB2P05120 415 aa26.34■■□□□ 1.81
LTBP4-206ENST00000546155 TGFB2P61812 414 aa26.34■■□□□ 1.81
LTBP4-206ENST00000546155 GRIN3BO60391 1043 aa26.33■■□□□ 1.81
LTBP4-206ENST00000546155 PXDNLA1KZ92 1463 aa26.32■■□□□ 1.8
LTBP4-206ENST00000546155 CCER2I3L3R5 266 aa26.31■■□□□ 1.8
LTBP4-206ENST00000546155 EIF2S2P20042 333 aaKnown RBP26.31■■□□□ 1.8
LTBP4-206ENST00000546155 CCDC24Q8N4L8 307 aa26.31■■□□□ 1.8
LTBP4-206ENST00000546155 MYL6BP14649 208 aa26.3■■□□□ 1.8
LTBP4-206ENST00000546155 CHRNA5P30532 468 aa26.3■■□□□ 1.8
LTBP4-206ENST00000546155 BCS1LQ9Y276 419 aa26.3■■□□□ 1.8
LTBP4-206ENST00000546155 NECTIN2Q92692 538 aa26.29■■□□□ 1.8
LTBP4-206ENST00000546155 CHL1O00533 1208 aa26.28■■□□□ 1.8
LTBP4-206ENST00000546155 KRT24Q2M2I5 525 aa26.28■■□□□ 1.8
LTBP4-206ENST00000546155 SETDB2Q96T68 719 aa26.27■■□□□ 1.8
LTBP4-206ENST00000546155 BABAM1Q9NWV8 329 aa26.27■■□□□ 1.8
LTBP4-206ENST00000546155 KDM3BQ7LBC6 1761 aa26.26■■□□□ 1.79
LTBP4-206ENST00000546155 KCNA3P22001 575 aa26.26■■□□□ 1.79
LTBP4-206ENST00000546155 NPHP1O15259 732 aa26.25■■□□□ 1.79
LTBP4-206ENST00000546155 HLFQ16534 295 aa26.24■■□□□ 1.79
LTBP4-206ENST00000546155 TTLL7Q6ZT98 887 aa26.24■■□□□ 1.79
LTBP4-206ENST00000546155 MIER1Q8N108 512 aa26.24■■□□□ 1.79
LTBP4-206ENST00000546155 CARMIL3Q8ND23 1372 aa26.23■■□□□ 1.79
LTBP4-206ENST00000546155 FAM177BA6PVY3 158 aa26.23■■□□□ 1.79
LTBP4-206ENST00000546155 ANXA1P04083 346 aa26.23■■□□□ 1.79
LTBP4-206ENST00000546155 PIM2Q9P1W9 311 aa26.23■■□□□ 1.79
LTBP4-206ENST00000546155 ZNF652Q9Y2D9 606 aa26.23■■□□□ 1.79
LTBP4-206ENST00000546155 PRR5LQ6MZQ0 368 aa26.21■■□□□ 1.79
LTBP4-206ENST00000546155 FAM9BQ8IZU0 186 aa26.21■■□□□ 1.79
LTBP4-206ENST00000546155 CFAP44Q96MT7 982 aa26.21■■□□□ 1.79
LTBP4-206ENST00000546155 N4BP2Q86UW6 1770 aaPredicted RBP26.2■■□□□ 1.79
LTBP4-206ENST00000546155 PROSER3Q2NL68 480 aa26.2■■□□□ 1.78
LTBP4-206ENST00000546155 NCBP3Q53F19 620 aaKnown RBP26.2■■□□□ 1.78
LTBP4-206ENST00000546155 CLEC4GQ6UXB4 293 aa26.2■■□□□ 1.78
LTBP4-206ENST00000546155 ARHGAP27Q6ZUM4 889 aa26.2■■□□□ 1.78
LTBP4-206ENST00000546155 C2CD5Q86YS7 1000 aa26.2■■□□□ 1.78
LTBP4-206ENST00000546155 ZBTB3Q9H5J0 574 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms