RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 C5P01031 1676 aa22.69■■□□□ 1.22
CD9-211ENST00000546073 WWC1Q8IX03 1113 aa22.69■■□□□ 1.22
CD9-211ENST00000546073 C4BP0C0L5 1744 aa22.68■■□□□ 1.22
CD9-211ENST00000546073 WDR63Q8IWG1 891 aa22.68■■□□□ 1.22
CD9-211ENST00000546073 KCPQ6ZWJ8 1503 aa22.67■■□□□ 1.22
CD9-211ENST00000546073 GIGYF1O75420 1035 aaPredicted RBP22.67■■□□□ 1.22
CD9-211ENST00000546073 INTS5Q6P9B9 1019 aaKnown RBP22.67■■□□□ 1.22
CD9-211ENST00000546073 PAPPAQ13219 1627 aa22.67■■□□□ 1.22
CD9-211ENST00000546073 ZNF831Q5JPB2 1677 aa22.66■■□□□ 1.22
CD9-211ENST00000546073 SENP3-EIF4A1A0A087X0R7 540 aa22.66■■□□□ 1.22
CD9-211ENST00000546073 IL6STP40189 918 aaPredicted RBP22.66■■□□□ 1.22
CD9-211ENST00000546073 NLGN1Q8N2Q7 840 aa22.66■■□□□ 1.22
CD9-211ENST00000546073 ARHGEF1Q92888 912 aaKnown RBP22.66■■□□□ 1.22
CD9-211ENST00000546073 USP16Q9Y5T5 823 aa22.66■■□□□ 1.22
CD9-211ENST00000546073 DLG5Q8TDM6 1919 aa22.65■■□□□ 1.22
CD9-211ENST00000546073 IL16Q14005 1332 aa22.65■■□□□ 1.22
CD9-211ENST00000546073 MYH16Q9H6N6 1097 aa22.65■■□□□ 1.22
CD9-211ENST00000546073 ZBTB1Q9Y2K1 713 aa22.65■■□□□ 1.22
CD9-211ENST00000546073 VIRMAQ69YN4 1812 aaKnown RBP22.64■■□□□ 1.22
CD9-211ENST00000546073 EIF2S2P20042 333 aaKnown RBP22.64■■□□□ 1.21
CD9-211ENST00000546073 A1BGP04217 495 aa22.63■■□□□ 1.21
CD9-211ENST00000546073 PDGFDQ9GZP0 370 aaPredicted RBP22.63■■□□□ 1.21
CD9-211ENST00000546073 MBIPQ9NS73 344 aa22.63■■□□□ 1.21
CD9-211ENST00000546073 HOXB7P09629 217 aa22.62■■□□□ 1.21
CD9-211ENST00000546073 GOLGA2Q08379 1002 aa22.62■■□□□ 1.21
CD9-211ENST00000546073 SOS1Q07889 1333 aaPredicted RBP22.61■■□□□ 1.21
CD9-211ENST00000546073 SIPA1L3O60292 1781 aaPredicted RBP22.61■■□□□ 1.21
CD9-211ENST00000546073 ERBB4Q15303 1308 aa22.6■■□□□ 1.21
CD9-211ENST00000546073 MSL1Q68DK7 614 aa22.6■■□□□ 1.21
CD9-211ENST00000546073 ZNF652Q9Y2D9 606 aa22.6■■□□□ 1.21
CD9-211ENST00000546073 COL15A1P39059 1388 aa22.6■■□□□ 1.21
CD9-211ENST00000546073 TAF1LQ8IZX4 1826 aa22.59■■□□□ 1.21
CD9-211ENST00000546073 DCAF8L1A6NGE4 600 aa22.59■■□□□ 1.21
CD9-211ENST00000546073 ZNF853P0CG23 659 aa22.59■■□□□ 1.21
CD9-211ENST00000546073 EIF5P55010 431 aaKnown RBP22.59■■□□□ 1.21
CD9-211ENST00000546073 HDGFL1Q5TGJ6 251 aa22.59■■□□□ 1.21
CD9-211ENST00000546073 NARFQ9UHQ1 456 aa22.59■■□□□ 1.21
CD9-211ENST00000546073 PRAMEF22A3QJZ6 481 aa22.58■■□□□ 1.21
CD9-211ENST00000546073 DUSP27Q5VZP5 1158 aa22.58■■□□□ 1.21
CD9-211ENST00000546073 KIF6Q6ZMV9 814 aa22.58■■□□□ 1.21
CD9-211ENST00000546073 SMIM5Q71RC9 77 aa22.58■■□□□ 1.21
CD9-211ENST00000546073 DZIP3Q86Y13 1208 aaKnown RBP22.58■■□□□ 1.21
CD9-211ENST00000546073 KLHL34Q8N239 644 aa22.58■■□□□ 1.21
CD9-211ENST00000546073 PARP3Q9Y6F1 533 aa22.58■■□□□ 1.21
CD9-211ENST00000546073 UBR2Q8IWV8 1755 aa22.58■■□□□ 1.2
CD9-211ENST00000546073 MYL6BP14649 208 aa22.57■■□□□ 1.2
CD9-211ENST00000546073 USP42Q9H9J4 1324 aaKnown RBP22.57■■□□□ 1.2
CD9-211ENST00000546073 NPHP1O15259 732 aa22.56■■□□□ 1.2
CD9-211ENST00000546073 USPL1Q5W0Q7 1092 aa22.56■■□□□ 1.2
CD9-211ENST00000546073 TJP1Q07157 1748 aa22.55■■□□□ 1.2
CD9-211ENST00000546073 NECTIN2Q92692 538 aa22.55■■□□□ 1.2
CD9-211ENST00000546073 DBF4Q9UBU7 674 aaPredicted RBP22.55■■□□□ 1.2
CD9-211ENST00000546073 TBC1D2BQ9UPU7 963 aa22.55■■□□□ 1.2
CD9-211ENST00000546073 CICQ96RK0 1608 aaPredicted RBP22.55■■□□□ 1.2
CD9-211ENST00000546073 QSER1Q2KHR3 1735 aa22.54■■□□□ 1.2
CD9-211ENST00000546073 ELL2O00472 640 aaPredicted RBP22.54■■□□□ 1.2
CD9-211ENST00000546073 GYS1P13807 737 aa22.54■■□□□ 1.2
CD9-211ENST00000546073 CCDC30Q5VVM6 783 aa22.54■■□□□ 1.2
CD9-211ENST00000546073 AMIGO3Q86WK7 504 aa22.54■■□□□ 1.2
CD9-211ENST00000546073 TSR2Q969E8 191 aaKnown RBP22.54■■□□□ 1.2
CD9-211ENST00000546073 STK31Q9BXU1 1019 aa22.54■■□□□ 1.2
CD9-211ENST00000546073 COL5A3P25940 1745 aaPredicted RBP22.54■■□□□ 1.2
CD9-211ENST00000546073 E9PSI1 815 aa22.53■■□□□ 1.2
CD9-211ENST00000546073 PIP4K2AP48426 406 aaPredicted RBP22.53■■□□□ 1.2
CD9-211ENST00000546073 SRP68Q9UHB9 627 aaKnown RBP22.53■■□□□ 1.2
CD9-211ENST00000546073 MMP10P09238 476 aa22.52■■□□□ 1.2
CD9-211ENST00000546073 PTGER2P43116 358 aa22.52■■□□□ 1.2
CD9-211ENST00000546073 KDM3BQ7LBC6 1761 aa22.52■■□□□ 1.2
CD9-211ENST00000546073 HNRNPUQ00839 825 aaKnown RBP eCLIP22.51■■□□□ 1.19
CD9-211ENST00000546073 TWISTNBQ3B726 338 aaPredicted RBP22.51■■□□□ 1.19
CD9-211ENST00000546073 DDX21Q9NR30 783 aaKnown RBP eCLIP22.51■■□□□ 1.19
CD9-211ENST00000546073 HYPKQ9NX55 129 aa22.51■■□□□ 1.19
CD9-211ENST00000546073 CASZ1Q86V15 1759 aa22.5■■□□□ 1.19
CD9-211ENST00000546073 CLEC4GQ6UXB4 293 aa22.5■■□□□ 1.19
CD9-211ENST00000546073 SETDB2Q96T68 719 aa22.5■■□□□ 1.19
CD9-211ENST00000546073 UBR3Q6ZT12 1888 aa22.49■■□□□ 1.19
CD9-211ENST00000546073 NBPF26B4DH59 902 aa22.49■■□□□ 1.19
CD9-211ENST00000546073 FKBP8Q14318 412 aa22.49■■□□□ 1.19
CD9-211ENST00000546073 KRT24Q2M2I5 525 aa22.49■■□□□ 1.19
CD9-211ENST00000546073 NBPF10Q6P3W6 841 aaKnown RBP22.49■■□□□ 1.19
CD9-211ENST00000546073 NBPF15Q8N660 670 aa22.49■■□□□ 1.19
CD9-211ENST00000546073 FANCIQ9NVI1 1328 aa22.49■■□□□ 1.19
CD9-211ENST00000546073 RGL2O15211 777 aa22.48■■□□□ 1.19
CD9-211ENST00000546073 AIMP1Q12904 312 aaKnown RBP22.48■■□□□ 1.19
CD9-211ENST00000546073 BICDL1Q6ZP65 573 aa22.48■■□□□ 1.19
CD9-211ENST00000546073 C8orf58Q8NAV2 365 aa22.48■■□□□ 1.19
CD9-211ENST00000546073 ERVV-1B6SEH8 477 aa22.47■■□□□ 1.19
CD9-211ENST00000546073 DDX58O95786 925 aaKnown RBP22.47■■□□□ 1.19
CD9-211ENST00000546073 CHPF2Q9P2E5 772 aa22.47■■□□□ 1.19
CD9-211ENST00000546073 LRP5O75197 1615 aa22.46■■□□□ 1.19
CD9-211ENST00000546073 SGIP1Q9BQI5 828 aa22.46■■□□□ 1.19
CD9-211ENST00000546073 GTF2E1P29083 439 aaPredicted RBP22.45■■□□□ 1.18
CD9-211ENST00000546073 EXOSC9Q06265 439 aaKnown RBP22.45■■□□□ 1.18
CD9-211ENST00000546073 HSP90AB3PQ58FF7 597 aa22.45■■□□□ 1.18
CD9-211ENST00000546073 FHDC1Q9C0D6 1143 aaPredicted RBP22.45■■□□□ 1.18
CD9-211ENST00000546073 CD2APQ9Y5K6 639 aa22.45■■□□□ 1.18
CD9-211ENST00000546073 CAMTA2O94983 1202 aa22.44■■□□□ 1.18
CD9-211ENST00000546073 MAP3K15Q6ZN16 1313 aa22.44■■□□□ 1.18
CD9-211ENST00000546073 COPS6Q7L5N1 327 aa22.44■■□□□ 1.18
CD9-211ENST00000546073 MYH14Q7Z406 1995 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms