RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 TWISTNBQ3B726 338 aaPredicted RBP23.95■■□□□ 1.43
CCDC189-212ENST00000546006 COL5A3P25940 1745 aaPredicted RBP23.95■■□□□ 1.42
CCDC189-212ENST00000546006 LAMB4A4D0S4 1761 aa23.94■■□□□ 1.42
CCDC189-212ENST00000546006 NUP188Q5SRE5 1749 aa23.94■■□□□ 1.42
CCDC189-212ENST00000546006 CNTNAP4Q9C0A0 1308 aa23.93■■□□□ 1.42
CCDC189-212ENST00000546006 EIF2S2P20042 333 aaKnown RBP23.93■■□□□ 1.42
CCDC189-212ENST00000546006 CRKLP46109 303 aaKnown RBP23.93■■□□□ 1.42
CCDC189-212ENST00000546006 C4BP0C0L5 1744 aa23.92■■□□□ 1.42
CCDC189-212ENST00000546006 VAMP4O75379 141 aa23.92■■□□□ 1.42
CCDC189-212ENST00000546006 RC3H1Q5TC82 1133 aaKnown RBP23.92■■□□□ 1.42
CCDC189-212ENST00000546006 HDGFL1Q5TGJ6 251 aa23.91■■□□□ 1.42
CCDC189-212ENST00000546006 CCDC87Q9NVE4 849 aa23.91■■□□□ 1.42
CCDC189-212ENST00000546006 INTS5Q6P9B9 1019 aaKnown RBP23.9■■□□□ 1.42
CCDC189-212ENST00000546006 CHMP4AQ9BY43 222 aa23.9■■□□□ 1.42
CCDC189-212ENST00000546006 A1BGP04217 495 aa23.89■■□□□ 1.42
CCDC189-212ENST00000546006 AKT1S1Q96B36 256 aa23.89■■□□□ 1.42
CCDC189-212ENST00000546006 AK7Q96M32 723 aa23.89■■□□□ 1.42
CCDC189-212ENST00000546006 NECTIN2Q92692 538 aa23.89■■□□□ 1.41
CCDC189-212ENST00000546006 ZBTB1Q9Y2K1 713 aa23.89■■□□□ 1.41
CCDC189-212ENST00000546006 ERBB4Q15303 1308 aa23.89■■□□□ 1.41
CCDC189-212ENST00000546006 CT47B1P0C2W7 299 aaPredicted RBP23.88■■□□□ 1.41
CCDC189-212ENST00000546006 ZNF827Q17R98 1081 aa23.88■■□□□ 1.41
CCDC189-212ENST00000546006 MYH14Q7Z406 1995 aaKnown RBP23.88■■□□□ 1.41
CCDC189-212ENST00000546006 ANO8Q9HCE9 1232 aaPredicted RBP23.88■■□□□ 1.41
CCDC189-212ENST00000546006 CCDC30Q5VVM6 783 aa23.87■■□□□ 1.41
CCDC189-212ENST00000546006 STK32BQ9NY57 414 aa23.87■■□□□ 1.41
CCDC189-212ENST00000546006 GNPATO15228 680 aa23.86■■□□□ 1.41
CCDC189-212ENST00000546006 CANXP27824 592 aaKnown RBP23.86■■□□□ 1.41
CCDC189-212ENST00000546006 NBPF14Q5TI25 921 aa23.86■■□□□ 1.41
CCDC189-212ENST00000546006 NBPF26B4DH59 902 aa23.85■■□□□ 1.41
CCDC189-212ENST00000546006 PDIA6Q15084 440 aa23.85■■□□□ 1.41
CCDC189-212ENST00000546006 SLC15A2Q16348 729 aa23.85■■□□□ 1.41
CCDC189-212ENST00000546006 NBPF10Q6P3W6 841 aaKnown RBP23.85■■□□□ 1.41
CCDC189-212ENST00000546006 NBPF15Q8N660 670 aa23.85■■□□□ 1.41
CCDC189-212ENST00000546006 RPS6KA4O75676 772 aa23.84■■□□□ 1.41
CCDC189-212ENST00000546006 PIP4K2AP48426 406 aaPredicted RBP23.84■■□□□ 1.41
CCDC189-212ENST00000546006 ZNF428Q96B54 188 aa23.84■■□□□ 1.41
CCDC189-212ENST00000546006 CHPF2Q9P2E5 772 aa23.84■■□□□ 1.41
CCDC189-212ENST00000546006 DBF4Q9UBU7 674 aaPredicted RBP23.84■■□□□ 1.41
CCDC189-212ENST00000546006 IL6STP40189 918 aaPredicted RBP23.84■■□□□ 1.41
CCDC189-212ENST00000546006 DDX21Q9NR30 783 aaKnown RBP eCLIP23.84■■□□□ 1.41
CCDC189-212ENST00000546006 TFCP2L1Q9NZI6 479 aa23.84■■□□□ 1.41
CCDC189-212ENST00000546006 RTCBQ9Y3I0 505 aaKnown RBP23.84■■□□□ 1.41
CCDC189-212ENST00000546006 TCERG1O14776 1098 aaKnown RBP23.82■■□□□ 1.4
CCDC189-212ENST00000546006 MYL6BP14649 208 aa23.82■■□□□ 1.4
CCDC189-212ENST00000546006 EIF5P55010 431 aaKnown RBP23.82■■□□□ 1.4
CCDC189-212ENST00000546006 PROSER3Q2NL68 480 aa23.82■■□□□ 1.4
CCDC189-212ENST00000546006 AMIGO3Q86WK7 504 aa23.82■■□□□ 1.4
CCDC189-212ENST00000546006 STK31Q9BXU1 1019 aa23.82■■□□□ 1.4
CCDC189-212ENST00000546006 ANXA1P04083 346 aa23.81■■□□□ 1.4
CCDC189-212ENST00000546006 UBR3Q6ZT12 1888 aa23.81■■□□□ 1.4
CCDC189-212ENST00000546006 SSFA2P28290 1259 aa23.8■■□□□ 1.4
CCDC189-212ENST00000546006 LRP10Q7Z4F1 713 aa23.8■■□□□ 1.4
CCDC189-212ENST00000546006 PHF14O94880 888 aa23.79■■□□□ 1.4
CCDC189-212ENST00000546006 ADRA2BP18089 450 aa23.79■■□□□ 1.4
CCDC189-212ENST00000546006 SMIM5Q71RC9 77 aa23.79■■□□□ 1.4
CCDC189-212ENST00000546006 HYPKQ9NX55 129 aa23.79■■□□□ 1.4
CCDC189-212ENST00000546006 ZNF330Q9Y3S2 320 aaPredicted RBP23.79■■□□□ 1.4
CCDC189-212ENST00000546006 COL15A1P39059 1388 aa23.79■■□□□ 1.4
CCDC189-212ENST00000546006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.79■■□□□ 1.4
CCDC189-212ENST00000546006 SLC4A2P04920 1241 aa23.79■■□□□ 1.4
CCDC189-212ENST00000546006 ALDH1L2Q3SY69 923 aa23.79■■□□□ 1.4
CCDC189-212ENST00000546006 TRAPPC3LQ5T215 181 aa23.79■■□□□ 1.4
CCDC189-212ENST00000546006 NPM2Q86SE8 214 aaKnown RBP23.79■■□□□ 1.4
CCDC189-212ENST00000546006 TUBGCP6Q96RT7 1819 aa23.78■■□□□ 1.4
CCDC189-212ENST00000546006 RARSP54136 660 aaKnown RBP23.78■■□□□ 1.4
CCDC189-212ENST00000546006 FLAD1Q8NFF5 587 aa23.78■■□□□ 1.4
CCDC189-212ENST00000546006 SSH1Q8WYL5 1049 aa23.78■■□□□ 1.4
CCDC189-212ENST00000546006 PNPLA7Q6ZV29 1317 aa23.77■■□□□ 1.4
CCDC189-212ENST00000546006 A0A087WZG4 1122 aa23.77■■□□□ 1.4
CCDC189-212ENST00000546006 ARHGEF1Q92888 912 aaKnown RBP23.77■■□□□ 1.4
CCDC189-212ENST00000546006 QSER1Q2KHR3 1735 aa23.76■■□□□ 1.39
CCDC189-212ENST00000546006 MRPL50Q8N5N7 158 aaKnown RBP23.75■■□□□ 1.39
CCDC189-212ENST00000546006 COL23A1Q86Y22 540 aaPredicted RBP23.74■■□□□ 1.39
CCDC189-212ENST00000546006 XAGE3Q8WTP9 111 aa23.74■■□□□ 1.39
CCDC189-212ENST00000546006 BCL2L13Q9BXK5 485 aa23.74■■□□□ 1.39
CCDC189-212ENST00000546006 PHAXQ9H814 394 aaKnown RBP23.74■■□□□ 1.39
CCDC189-212ENST00000546006 SMC4Q9NTJ3 1288 aa23.74■■□□□ 1.39
CCDC189-212ENST00000546006 COPS6Q7L5N1 327 aa23.74■■□□□ 1.39
CCDC189-212ENST00000546006 DZIP3Q86Y13 1208 aaKnown RBP23.74■■□□□ 1.39
CCDC189-212ENST00000546006 CACNA1FO60840 1977 aa23.73■■□□□ 1.39
CCDC189-212ENST00000546006 RFC4P35249 363 aa23.73■■□□□ 1.39
CCDC189-212ENST00000546006 AIMP1Q12904 312 aaKnown RBP23.73■■□□□ 1.39
CCDC189-212ENST00000546006 R3HDM1Q15032 1099 aaKnown RBP23.73■■□□□ 1.39
CCDC189-212ENST00000546006 TBC1D2BQ9UPU7 963 aa23.73■■□□□ 1.39
CCDC189-212ENST00000546006 TTLL7Q6ZT98 887 aa23.72■■□□□ 1.39
CCDC189-212ENST00000546006 G2E3Q7L622 706 aa23.72■■□□□ 1.39
CCDC189-212ENST00000546006 ARXQ96QS3 562 aa23.72■■□□□ 1.39
CCDC189-212ENST00000546006 MSH5O43196 834 aa23.71■■□□□ 1.39
CCDC189-212ENST00000546006 BRPF1P55201 1214 aaPredicted RBP23.71■■□□□ 1.39
CCDC189-212ENST00000546006 FLIIQ13045 1269 aa23.71■■□□□ 1.39
CCDC189-212ENST00000546006 KIF6Q6ZMV9 814 aa23.71■■□□□ 1.39
CCDC189-212ENST00000546006 NARFQ9UHQ1 456 aa23.71■■□□□ 1.39
CCDC189-212ENST00000546006 C4AP0C0L4 1744 aa23.71■■□□□ 1.39
CCDC189-212ENST00000546006 RCAN3Q9UKA8 241 aa23.7■■□□□ 1.38
CCDC189-212ENST00000546006 USP42Q9H9J4 1324 aaKnown RBP23.7■■□□□ 1.38
CCDC189-212ENST00000546006 ZPR1O75312 459 aa23.69■■□□□ 1.38
CCDC189-212ENST00000546006 BCAR3O75815 825 aa23.69■■□□□ 1.38
CCDC189-212ENST00000546006 SRP68Q9UHB9 627 aaKnown RBP23.69■■□□□ 1.38
CCDC189-212ENST00000546006 PSDA5PKW4 1024 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms