RNA–Protein interactions for RNA: ENST00000545671.5

MMP17-210, Transcript of matrix metallopeptidase 17, human

TSL 3

Gene MMP17, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMP17-210	ENST00000545671	TRAPPC3L	Q5T215	181 aa		32.35	■■■□□ 2.77
MMP17-210	ENST00000545671	LAMB4	A4D0S4	1761 aa		32.35	■■■□□ 2.77
MMP17-210	ENST00000545671	SOS1	Q07889	1333 aa	Predicted RBP	32.33	■■■□□ 2.77
MMP17-210	ENST00000545671	MSH5	O43196	834 aa		32.33	■■■□□ 2.77
MMP17-210	ENST00000545671	CALD1	Q05682	793 aa	Known RBP	32.33	■■■□□ 2.77
MMP17-210	ENST00000545671	CCDC27	Q2M243	656 aa		32.33	■■■□□ 2.77
MMP17-210	ENST00000545671	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.33	■■■□□ 2.77
MMP17-210	ENST00000545671	MIS18A	Q9NYP9	233 aa		32.32	■■■□□ 2.76
MMP17-210	ENST00000545671	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.32	■■■□□ 2.76
MMP17-210	ENST00000545671	TSPYL4	Q9UJ04	414 aa		32.32	■■■□□ 2.76
MMP17-210	ENST00000545671	EIF4A1	P60842	406 aa	Known RBP	32.31	■■■□□ 2.76
MMP17-210	ENST00000545671	CHL1	O00533	1208 aa		32.3	■■■□□ 2.76
MMP17-210	ENST00000545671	DIEXF	Q68CQ4	756 aa	Known RBP	32.3	■■■□□ 2.76
MMP17-210	ENST00000545671	ARHGEF1	Q92888	912 aa	Known RBP	32.3	■■■□□ 2.76
MMP17-210	ENST00000545671	ZBTB1	Q9Y2K1	713 aa		32.3	■■■□□ 2.76
MMP17-210	ENST00000545671	POLD1	P28340	1107 aa		32.29	■■■□□ 2.76
MMP17-210	ENST00000545671	NGEF	Q8N5V2	710 aa		32.28	■■■□□ 2.76
MMP17-210	ENST00000545671	GIGYF1	O75420	1035 aa	Predicted RBP	32.27	■■■□□ 2.76
MMP17-210	ENST00000545671	CFAP44	Q96MT7	982 aa		32.27	■■■□□ 2.76
MMP17-210	ENST00000545671	COL15A1	P39059	1388 aa		32.27	■■■□□ 2.76
MMP17-210	ENST00000545671	RFC4	P35249	363 aa		32.26	■■■□□ 2.75
MMP17-210	ENST00000545671	SMIM5	Q71RC9	77 aa		32.26	■■■□□ 2.75
MMP17-210	ENST00000545671	IL6ST	P40189	918 aa	Predicted RBP	32.25	■■■□□ 2.75
MMP17-210	ENST00000545671	EIF5	P55010	431 aa	Known RBP	32.25	■■■□□ 2.75
MMP17-210	ENST00000545671	USP16	Q9Y5T5	823 aa		32.25	■■■□□ 2.75
MMP17-210	ENST00000545671	USP42	Q9H9J4	1324 aa	Known RBP	32.25	■■■□□ 2.75
MMP17-210	ENST00000545671	FAM9B	Q8IZU0	186 aa		32.24	■■■□□ 2.75
MMP17-210	ENST00000545671	IFT57	Q9NWB7	429 aa		32.24	■■■□□ 2.75
MMP17-210	ENST00000545671	ZNF853	P0CG23	659 aa		32.23	■■■□□ 2.75
MMP17-210	ENST00000545671	ARX	Q96QS3	562 aa		32.23	■■■□□ 2.75
MMP17-210	ENST00000545671		A0A087WZG4	1122 aa		32.22	■■■□□ 2.75
MMP17-210	ENST00000545671	NLGN1	Q8N2Q7	840 aa		32.22	■■■□□ 2.75
MMP17-210	ENST00000545671	PRAMEF22	A3QJZ6	481 aa		32.21	■■■□□ 2.75
MMP17-210	ENST00000545671	GYS1	P13807	737 aa		32.2	■■■□□ 2.75
MMP17-210	ENST00000545671	CANX	P27824	592 aa	Known RBP	32.2	■■■□□ 2.75
MMP17-210	ENST00000545671	GNAI1	P63096	354 aa		32.2	■■■□□ 2.75
MMP17-210	ENST00000545671	WWC1	Q8IX03	1113 aa		32.2	■■■□□ 2.75
MMP17-210	ENST00000545671	A1BG	P04217	495 aa		32.19	■■■□□ 2.74
MMP17-210	ENST00000545671	MSL1	Q68DK7	614 aa		32.19	■■■□□ 2.74
MMP17-210	ENST00000545671	NARF	Q9UHQ1	456 aa		32.19	■■■□□ 2.74
MMP17-210	ENST00000545671	ERBB4	Q15303	1308 aa		32.19	■■■□□ 2.74
MMP17-210	ENST00000545671	IL16	Q14005	1332 aa		32.18	■■■□□ 2.74
MMP17-210	ENST00000545671	SCN7A	Q01118	1682 aa		32.17	■■■□□ 2.74
MMP17-210	ENST00000545671	ZPR1	O75312	459 aa		32.16	■■■□□ 2.74
MMP17-210	ENST00000545671	HOXB7	P09629	217 aa		32.16	■■■□□ 2.74
MMP17-210	ENST00000545671	MBIP	Q9NS73	344 aa		32.15	■■■□□ 2.74
MMP17-210	ENST00000545671	LAS1L	Q9Y4W2	734 aa	Known RBP	32.15	■■■□□ 2.74
MMP17-210	ENST00000545671	NPM2	Q86SE8	214 aa	Known RBP	32.14	■■■□□ 2.74
MMP17-210	ENST00000545671	RGL2	O15211	777 aa		32.13	■■■□□ 2.73
MMP17-210	ENST00000545671	SRP68	Q9UHB9	627 aa	Known RBP	32.13	■■■□□ 2.73
MMP17-210	ENST00000545671	BCOR	Q6W2J9	1755 aa		32.12	■■■□□ 2.73
MMP17-210	ENST00000545671	NBPF26	B4DH59	902 aa		32.12	■■■□□ 2.73
MMP17-210	ENST00000545671	NBPF10	Q6P3W6	841 aa	Known RBP	32.12	■■■□□ 2.73
MMP17-210	ENST00000545671	WDR63	Q8IWG1	891 aa		32.12	■■■□□ 2.73
MMP17-210	ENST00000545671	NBPF15	Q8N660	670 aa		32.12	■■■□□ 2.73
MMP17-210	ENST00000545671	MMP10	P09238	476 aa		32.1	■■■□□ 2.73
MMP17-210	ENST00000545671	USPL1	Q5W0Q7	1092 aa		32.1	■■■□□ 2.73
MMP17-210	ENST00000545671	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.1	■■■□□ 2.73
MMP17-210	ENST00000545671	FKBP8	Q14318	412 aa		32.08	■■■□□ 2.73
MMP17-210	ENST00000545671	MIER1	Q8N108	512 aa		32.07	■■■□□ 2.72
MMP17-210	ENST00000545671	SYT17	Q9BSW7	474 aa		32.07	■■■□□ 2.72
MMP17-210	ENST00000545671	BCL2L12	Q9HB09	334 aa		32.07	■■■□□ 2.72
MMP17-210	ENST00000545671	DZIP3	Q86Y13	1208 aa	Known RBP	32.06	■■■□□ 2.72
MMP17-210	ENST00000545671	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.06	■■■□□ 2.72
MMP17-210	ENST00000545671	CD2AP	Q9Y5K6	639 aa		32.06	■■■□□ 2.72
MMP17-210	ENST00000545671	KIF13B	Q9NQT8	1826 aa		32.05	■■■□□ 2.72
MMP17-210	ENST00000545671	CAMTA2	O94983	1202 aa		32.05	■■■□□ 2.72
MMP17-210	ENST00000545671	TM4SF1	P30408	202 aa		32.05	■■■□□ 2.72
MMP17-210	ENST00000545671	PIP4K2A	P48426	406 aa	Predicted RBP	32.03	■■■□□ 2.72
MMP17-210	ENST00000545671	KRT24	Q2M2I5	525 aa		32.03	■■■□□ 2.72
MMP17-210	ENST00000545671	CLEC4G	Q6UXB4	293 aa		32.03	■■■□□ 2.72
MMP17-210	ENST00000545671	CHMP4A	Q9BY43	222 aa		32.03	■■■□□ 2.72
MMP17-210	ENST00000545671	TBC1D2B	Q9UPU7	963 aa		32.03	■■■□□ 2.72
MMP17-210	ENST00000545671	PARP3	Q9Y6F1	533 aa		32.03	■■■□□ 2.72
MMP17-210	ENST00000545671	ZNF521	Q96K83	1311 aa		32.02	■■■□□ 2.72
MMP17-210	ENST00000545671	DUSP27	Q5VZP5	1158 aa		32.02	■■■□□ 2.72
MMP17-210	ENST00000545671	NRXN2	Q9P2S2	1712 aa		32.01	■■■□□ 2.72
MMP17-210	ENST00000545671	DCAF8L1	A6NGE4	600 aa		32.01	■■■□□ 2.71
MMP17-210	ENST00000545671	PDIA6	Q15084	440 aa		32.01	■■■□□ 2.71
MMP17-210	ENST00000545671	LRP10	Q7Z4F1	713 aa		32.01	■■■□□ 2.71
MMP17-210	ENST00000545671	C10orf71	Q711Q0	1435 aa		32	■■■□□ 2.71
MMP17-210	ENST00000545671	EIF2S2	P20042	333 aa	Known RBP	32	■■■□□ 2.71
MMP17-210	ENST00000545671	NFIX	Q14938	502 aa		32	■■■□□ 2.71
MMP17-210	ENST00000545671	ZNF652	Q9Y2D9	606 aa		32	■■■□□ 2.71
MMP17-210	ENST00000545671	POLRMT	O00411	1230 aa	Known RBP	31.99	■■■□□ 2.71
MMP17-210	ENST00000545671	DDR1	Q08345	913 aa		31.99	■■■□□ 2.71
MMP17-210	ENST00000545671	HDGFL1	Q5TGJ6	251 aa		31.99	■■■□□ 2.71
MMP17-210	ENST00000545671	UTRN	P46939	3433 aa		31.98	■■■□□ 2.71
MMP17-210	ENST00000545671	SENP3-EIF4A1	A0A087X0R7	540 aa		31.98	■■■□□ 2.71
MMP17-210	ENST00000545671	ERVV-1	B6SEH8	477 aa		31.98	■■■□□ 2.71
MMP17-210	ENST00000545671	DDX21	Q9NR30	783 aa	Known RBP eCLIP	31.98	■■■□□ 2.71
MMP17-210	ENST00000545671	SALL2	Q9Y467	1007 aa	Predicted RBP	31.97	■■■□□ 2.71
MMP17-210	ENST00000545671	MAP3K15	Q6ZN16	1313 aa		31.96	■■■□□ 2.71
MMP17-210	ENST00000545671	FANCI	Q9NVI1	1328 aa		31.96	■■■□□ 2.71
MMP17-210	ENST00000545671	AFDN	P55196	1824 aa	Known RBP	31.96	■■■□□ 2.71
MMP17-210	ENST00000545671	MYL6B	P14649	208 aa		31.95	■■■□□ 2.71
MMP17-210	ENST00000545671	YY1	P25490	414 aa		31.95	■■■□□ 2.71
MMP17-210	ENST00000545671	TSR2	Q969E8	191 aa	Known RBP	31.95	■■■□□ 2.71
MMP17-210	ENST00000545671	DBF4	Q9UBU7	674 aa	Predicted RBP	31.95	■■■□□ 2.71
MMP17-210	ENST00000545671	CARMIL3	Q8ND23	1372 aa		31.94	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms