RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TMPOP42166 694 aaKnown RBP20.7■□□□□ 0.9
CCDC78-216ENST00000544996 ZBTB1Q9Y2K1 713 aa20.7■□□□□ 0.9
CCDC78-216ENST00000544996 UBR2Q8IWV8 1755 aa20.69■□□□□ 0.9
CCDC78-216ENST00000544996 MMP10P09238 476 aa20.69■□□□□ 0.9
CCDC78-216ENST00000544996 SNRPA1P09661 255 aaKnown RBP20.69■□□□□ 0.9
CCDC78-216ENST00000544996 GYS1P13807 737 aa20.69■□□□□ 0.9
CCDC78-216ENST00000544996 CANXP27824 592 aaKnown RBP20.69■□□□□ 0.9
CCDC78-216ENST00000544996 THUMPD2Q9BTF0 503 aaKnown RBP20.69■□□□□ 0.9
CCDC78-216ENST00000544996 CD2APQ9Y5K6 639 aa20.69■□□□□ 0.9
CCDC78-216ENST00000544996 USP42Q9H9J4 1324 aaKnown RBP20.69■□□□□ 0.9
CCDC78-216ENST00000544996 NPM2Q86SE8 214 aaKnown RBP20.68■□□□□ 0.9
CCDC78-216ENST00000544996 MIS18AQ9NYP9 233 aa20.68■□□□□ 0.9
CCDC78-216ENST00000544996 MYH14Q7Z406 1995 aaKnown RBP20.68■□□□□ 0.9
CCDC78-216ENST00000544996 NEUROD2Q15784 382 aa20.67■□□□□ 0.9
CCDC78-216ENST00000544996 SRP68Q9UHB9 627 aaKnown RBP20.67■□□□□ 0.9
CCDC78-216ENST00000544996 RRP7AQ9Y3A4 280 aaKnown RBP20.67■□□□□ 0.9
CCDC78-216ENST00000544996 A0A087WZG4 1122 aa20.66■□□□□ 0.9
CCDC78-216ENST00000544996 COL15A1P39059 1388 aa20.66■□□□□ 0.9
CCDC78-216ENST00000544996 NLGN2Q8NFZ4 835 aa20.65■□□□□ 0.9
CCDC78-216ENST00000544996 NARFQ9UHQ1 456 aa20.65■□□□□ 0.9
CCDC78-216ENST00000544996 PARP3Q9Y6F1 533 aa20.65■□□□□ 0.9
CCDC78-216ENST00000544996 IL6STP40189 918 aaPredicted RBP20.64■□□□□ 0.89
CCDC78-216ENST00000544996 EIF5P55010 431 aaKnown RBP20.64■□□□□ 0.89
CCDC78-216ENST00000544996 FKBP8Q14318 412 aa20.64■□□□□ 0.89
CCDC78-216ENST00000544996 ZNF330Q9Y3S2 320 aaPredicted RBP20.64■□□□□ 0.89
CCDC78-216ENST00000544996 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
CCDC78-216ENST00000544996 A1BGP04217 495 aa20.63■□□□□ 0.89
CCDC78-216ENST00000544996 GPR162Q16538 588 aa20.63■□□□□ 0.89
CCDC78-216ENST00000544996 USPL1Q5W0Q7 1092 aa20.63■□□□□ 0.89
CCDC78-216ENST00000544996 BABAM1Q9NWV8 329 aa20.62■□□□□ 0.89
CCDC78-216ENST00000544996 TSPYL4Q9UJ04 414 aa20.62■□□□□ 0.89
CCDC78-216ENST00000544996 DLG5Q8TDM6 1919 aa20.62■□□□□ 0.89
CCDC78-216ENST00000544996 PRAMEF22A3QJZ6 481 aa20.61■□□□□ 0.89
CCDC78-216ENST00000544996 EIF4A1P60842 406 aaKnown RBP20.61■□□□□ 0.89
CCDC78-216ENST00000544996 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
CCDC78-216ENST00000544996 C4AP0C0L4 1744 aa20.61■□□□□ 0.89
CCDC78-216ENST00000544996 CCDC184Q52MB2 194 aa20.6■□□□□ 0.89
CCDC78-216ENST00000544996 MRS2Q9HD23 443 aa20.6■□□□□ 0.89
CCDC78-216ENST00000544996 GIGYF1O75420 1035 aaPredicted RBP20.59■□□□□ 0.89
CCDC78-216ENST00000544996 TRIM35Q9UPQ4 493 aa20.59■□□□□ 0.89
CCDC78-216ENST00000544996 APAF1O14727 1248 aa20.58■□□□□ 0.89
CCDC78-216ENST00000544996 TBC1D2BQ9UPU7 963 aa20.58■□□□□ 0.89
CCDC78-216ENST00000544996 TM4SF1P30408 202 aa20.57■□□□□ 0.88
CCDC78-216ENST00000544996 PIP4K2AP48426 406 aaPredicted RBP20.56■□□□□ 0.88
CCDC78-216ENST00000544996 TGFB2P61812 414 aa20.56■□□□□ 0.88
CCDC78-216ENST00000544996 DDR1Q08345 913 aa20.56■□□□□ 0.88
CCDC78-216ENST00000544996 NFIXQ14938 502 aa20.56■□□□□ 0.88
CCDC78-216ENST00000544996 BCL2L12Q9HB09 334 aa20.56■□□□□ 0.88
CCDC78-216ENST00000544996 LAS1LQ9Y4W2 734 aaKnown RBP20.56■□□□□ 0.88
CCDC78-216ENST00000544996 POLRMTO00411 1230 aaKnown RBP20.55■□□□□ 0.88
CCDC78-216ENST00000544996 DZIP3Q86Y13 1208 aaKnown RBP20.55■□□□□ 0.88
CCDC78-216ENST00000544996 CHL1O00533 1208 aa20.54■□□□□ 0.88
CCDC78-216ENST00000544996 GRIN3BO60391 1043 aa20.54■□□□□ 0.88
CCDC78-216ENST00000544996 CALD1Q05682 793 aaKnown RBP20.54■□□□□ 0.88
CCDC78-216ENST00000544996 KDM3BQ7LBC6 1761 aa20.54■□□□□ 0.88
CCDC78-216ENST00000544996 C10orf71Q711Q0 1435 aa20.53■□□□□ 0.88
CCDC78-216ENST00000544996 NBPF26B4DH59 902 aa20.53■□□□□ 0.88
CCDC78-216ENST00000544996 NBPF10Q6P3W6 841 aaKnown RBP20.53■□□□□ 0.88
CCDC78-216ENST00000544996 BICDL1Q6ZP65 573 aa20.53■□□□□ 0.88
CCDC78-216ENST00000544996 NBPF15Q8N660 670 aa20.53■□□□□ 0.88
CCDC78-216ENST00000544996 CAMTA2O94983 1202 aa20.52■□□□□ 0.88
CCDC78-216ENST00000544996 YY1P25490 414 aa20.52■□□□□ 0.88
CCDC78-216ENST00000544996 ZNF652Q9Y2D9 606 aa20.52■□□□□ 0.88
CCDC78-216ENST00000544996 SERPINB2P05120 415 aa20.51■□□□□ 0.87
CCDC78-216ENST00000544996 YBX3P16989 372 aaKnown RBP eCLIP20.51■□□□□ 0.87
CCDC78-216ENST00000544996 CFAP44Q96MT7 982 aa20.51■□□□□ 0.87
CCDC78-216ENST00000544996 A0A0G2JLW4 131 aa20.5■□□□□ 0.87
CCDC78-216ENST00000544996 TBC1D9BQ66K14 1250 aa20.5■□□□□ 0.87
CCDC78-216ENST00000544996 CLEC4GQ6UXB4 293 aa20.5■□□□□ 0.87
CCDC78-216ENST00000544996 SETDB2Q96T68 719 aa20.5■□□□□ 0.87
CCDC78-216ENST00000544996 ERBB4Q15303 1308 aa20.5■□□□□ 0.87
CCDC78-216ENST00000544996 EIF2S2P20042 333 aaKnown RBP20.49■□□□□ 0.87
CCDC78-216ENST00000544996 RGL2O15211 777 aa20.48■□□□□ 0.87
CCDC78-216ENST00000544996 DPEP1P16444 411 aa20.48■□□□□ 0.87
CCDC78-216ENST00000544996 NGEFQ8N5V2 710 aa20.48■□□□□ 0.87
CCDC78-216ENST00000544996 WWC3Q9ULE0 1092 aa20.48■□□□□ 0.87
CCDC78-216ENST00000544996 PXDNLA1KZ92 1463 aa20.48■□□□□ 0.87
CCDC78-216ENST00000544996 CARMIL3Q8ND23 1372 aa20.47■□□□□ 0.87
CCDC78-216ENST00000544996 MYL6BP14649 208 aa20.47■□□□□ 0.87
CCDC78-216ENST00000544996 GNAI1P63096 354 aa20.47■□□□□ 0.87
CCDC78-216ENST00000544996 IFT57Q9NWB7 429 aa20.47■□□□□ 0.87
CCDC78-216ENST00000544996 NPHP1O15259 732 aa20.46■□□□□ 0.87
CCDC78-216ENST00000544996 KIF6Q6ZMV9 814 aa20.46■□□□□ 0.87
CCDC78-216ENST00000544996 LAMB4A4D0S4 1761 aa20.46■□□□□ 0.87
CCDC78-216ENST00000544996 MBIPQ9NS73 344 aa20.45■□□□□ 0.86
CCDC78-216ENST00000544996 SCN7AQ01118 1682 aa20.45■□□□□ 0.86
CCDC78-216ENST00000544996 ERVV-1B6SEH8 477 aa20.44■□□□□ 0.86
CCDC78-216ENST00000544996 HOXB7P09629 217 aa20.44■□□□□ 0.86
CCDC78-216ENST00000544996 ZNF853P0CG23 659 aa20.44■□□□□ 0.86
CCDC78-216ENST00000544996 CCDC27Q2M243 656 aa20.44■□□□□ 0.86
CCDC78-216ENST00000544996 PIM2Q9P1W9 311 aa20.44■□□□□ 0.86
CCDC78-216ENST00000544996 BCS1LQ9Y276 419 aa20.44■□□□□ 0.86
CCDC78-216ENST00000544996 KIF13BQ9NQT8 1826 aa20.43■□□□□ 0.86
CCDC78-216ENST00000544996 KRT24Q2M2I5 525 aa20.43■□□□□ 0.86
CCDC78-216ENST00000544996 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
CCDC78-216ENST00000544996 FAM9BQ8IZU0 186 aa20.43■□□□□ 0.86
CCDC78-216ENST00000544996 CNBD1Q8NA66 436 aa20.43■□□□□ 0.86
CCDC78-216ENST00000544996 NECTIN2Q92692 538 aa20.43■□□□□ 0.86
CCDC78-216ENST00000544996 KCNA3P22001 575 aa20.42■□□□□ 0.86
CCDC78-216ENST00000544996 CHRNA5P30532 468 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms