RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 INTS5Q6P9B9 1019 aaKnown RBP23.39■■□□□ 1.33
TSFM-208ENST00000543727 TSPYL4Q9UJ04 414 aa23.39■■□□□ 1.33
TSFM-208ENST00000543727 MSH5O43196 834 aa23.38■■□□□ 1.33
TSFM-208ENST00000543727 PHF14O94880 888 aa23.38■■□□□ 1.33
TSFM-208ENST00000543727 SOS1Q07889 1333 aaPredicted RBP23.37■■□□□ 1.33
TSFM-208ENST00000543727 AMIGO3Q86WK7 504 aa23.37■■□□□ 1.33
TSFM-208ENST00000543727 EIF4A1P60842 406 aaKnown RBP23.36■■□□□ 1.33
TSFM-208ENST00000543727 CFAP44Q96MT7 982 aa23.36■■□□□ 1.33
TSFM-208ENST00000543727 SGIP1Q9BQI5 828 aa23.36■■□□□ 1.33
TSFM-208ENST00000543727 CHL1O00533 1208 aa23.35■■□□□ 1.33
TSFM-208ENST00000543727 POLD1P28340 1107 aa23.35■■□□□ 1.33
TSFM-208ENST00000543727 PTGER2P43116 358 aa23.35■■□□□ 1.33
TSFM-208ENST00000543727 FAM9BQ8IZU0 186 aa23.35■■□□□ 1.33
TSFM-208ENST00000543727 MIS18AQ9NYP9 233 aa23.35■■□□□ 1.33
TSFM-208ENST00000543727 SCN7AQ01118 1682 aa23.35■■□□□ 1.33
TSFM-208ENST00000543727 RFC4P35249 363 aa23.34■■□□□ 1.33
TSFM-208ENST00000543727 IFT57Q9NWB7 429 aa23.34■■□□□ 1.33
TSFM-208ENST00000543727 COL15A1P39059 1388 aa23.34■■□□□ 1.33
TSFM-208ENST00000543727 BCORQ6W2J9 1755 aa23.33■■□□□ 1.33
TSFM-208ENST00000543727 GIGYF1O75420 1035 aaPredicted RBP23.33■■□□□ 1.33
TSFM-208ENST00000543727 ARHGEF1Q92888 912 aaKnown RBP23.33■■□□□ 1.33
TSFM-208ENST00000543727 ATF5Q9Y2D1 282 aaPredicted RBP23.33■■□□□ 1.33
TSFM-208ENST00000543727 ZBTB1Q9Y2K1 713 aa23.33■■□□□ 1.33
TSFM-208ENST00000543727 SRCAPQ6ZRS2 3230 aa23.32■■□□□ 1.32
TSFM-208ENST00000543727 A0A087WZG4 1122 aa23.32■■□□□ 1.32
TSFM-208ENST00000543727 IL6STP40189 918 aaPredicted RBP23.32■■□□□ 1.32
TSFM-208ENST00000543727 GNAI1P63096 354 aa23.32■■□□□ 1.32
TSFM-208ENST00000543727 PPP1R1BQ9UD71 204 aaPredicted RBP23.32■■□□□ 1.32
TSFM-208ENST00000543727 ZNF853P0CG23 659 aa23.31■■□□□ 1.32
TSFM-208ENST00000543727 IL16Q14005 1332 aa23.31■■□□□ 1.32
TSFM-208ENST00000543727 ERBB4Q15303 1308 aa23.31■■□□□ 1.32
TSFM-208ENST00000543727 USP42Q9H9J4 1324 aaKnown RBP23.31■■□□□ 1.32
TSFM-208ENST00000543727 EIF5P55010 431 aaKnown RBP23.3■■□□□ 1.32
TSFM-208ENST00000543727 WWC1Q8IX03 1113 aa23.3■■□□□ 1.32
TSFM-208ENST00000543727 NLGN1Q8N2Q7 840 aa23.3■■□□□ 1.32
TSFM-208ENST00000543727 USP16Q9Y5T5 823 aa23.3■■□□□ 1.32
TSFM-208ENST00000543727 HOXB7P09629 217 aa23.29■■□□□ 1.32
TSFM-208ENST00000543727 NPM2Q86SE8 214 aaKnown RBP23.29■■□□□ 1.32
TSFM-208ENST00000543727 CANXP27824 592 aaKnown RBP23.28■■□□□ 1.32
TSFM-208ENST00000543727 ARXQ96QS3 562 aa23.28■■□□□ 1.32
TSFM-208ENST00000543727 ZPR1O75312 459 aa23.27■■□□□ 1.32
TSFM-208ENST00000543727 NARFQ9UHQ1 456 aa23.27■■□□□ 1.32
TSFM-208ENST00000543727 LAS1LQ9Y4W2 734 aaKnown RBP23.27■■□□□ 1.32
TSFM-208ENST00000543727 PRAMEF22A3QJZ6 481 aa23.26■■□□□ 1.31
TSFM-208ENST00000543727 RGL2O15211 777 aa23.26■■□□□ 1.31
TSFM-208ENST00000543727 A1BGP04217 495 aa23.26■■□□□ 1.31
TSFM-208ENST00000543727 GYS1P13807 737 aa23.26■■□□□ 1.31
TSFM-208ENST00000543727 SMIM5Q71RC9 77 aa23.26■■□□□ 1.31
TSFM-208ENST00000543727 WDR63Q8IWG1 891 aa23.26■■□□□ 1.31
TSFM-208ENST00000543727 KIF13BQ9NQT8 1826 aa23.26■■□□□ 1.31
TSFM-208ENST00000543727 MBIPQ9NS73 344 aa23.25■■□□□ 1.31
TSFM-208ENST00000543727 MSL1Q68DK7 614 aa23.24■■□□□ 1.31
TSFM-208ENST00000543727 CHMP4AQ9BY43 222 aa23.24■■□□□ 1.31
TSFM-208ENST00000543727 MIER1Q8N108 512 aa23.22■■□□□ 1.31
TSFM-208ENST00000543727 NRXN2Q9P2S2 1712 aa23.21■■□□□ 1.31
TSFM-208ENST00000543727 CACNA1FO60840 1977 aa23.21■■□□□ 1.31
TSFM-208ENST00000543727 NBPF26B4DH59 902 aa23.2■■□□□ 1.3
TSFM-208ENST00000543727 USPL1Q5W0Q7 1092 aa23.2■■□□□ 1.3
TSFM-208ENST00000543727 NBPF10Q6P3W6 841 aaKnown RBP23.2■■□□□ 1.3
TSFM-208ENST00000543727 NBPF15Q8N660 670 aa23.2■■□□□ 1.3
TSFM-208ENST00000543727 SRP68Q9UHB9 627 aaKnown RBP23.2■■□□□ 1.3
TSFM-208ENST00000543727 MMP10P09238 476 aa23.19■■□□□ 1.3
TSFM-208ENST00000543727 ZNF330Q9Y3S2 320 aaPredicted RBP23.19■■□□□ 1.3
TSFM-208ENST00000543727 NUP98P52948 1817 aa23.19■■□□□ 1.3
TSFM-208ENST00000543727 AFDNP55196 1824 aaKnown RBP23.19■■□□□ 1.3
TSFM-208ENST00000543727 DZIP3Q86Y13 1208 aaKnown RBP23.18■■□□□ 1.3
TSFM-208ENST00000543727 FKBP8Q14318 412 aa23.17■■□□□ 1.3
TSFM-208ENST00000543727 CLEC4GQ6UXB4 293 aa23.17■■□□□ 1.3
TSFM-208ENST00000543727 FHDC1Q9C0D6 1143 aaPredicted RBP23.17■■□□□ 1.3
TSFM-208ENST00000543727 ZNF652Q9Y2D9 606 aa23.17■■□□□ 1.3
TSFM-208ENST00000543727 CD2APQ9Y5K6 639 aa23.17■■□□□ 1.3
TSFM-208ENST00000543727 PARP3Q9Y6F1 533 aa23.17■■□□□ 1.3
TSFM-208ENST00000543727 ZNF521Q96K83 1311 aa23.16■■□□□ 1.3
TSFM-208ENST00000543727 DUSP27Q5VZP5 1158 aa23.16■■□□□ 1.3
TSFM-208ENST00000543727 CAMTA2O94983 1202 aa23.15■■□□□ 1.3
TSFM-208ENST00000543727 EIF2S2P20042 333 aaKnown RBP23.15■■□□□ 1.3
TSFM-208ENST00000543727 TM4SF1P30408 202 aa23.15■■□□□ 1.3
TSFM-208ENST00000543727 HDGFL1Q5TGJ6 251 aa23.15■■□□□ 1.3
TSFM-208ENST00000543727 SYT17Q9BSW7 474 aa23.15■■□□□ 1.3
TSFM-208ENST00000543727 BCL2L12Q9HB09 334 aa23.15■■□□□ 1.3
TSFM-208ENST00000543727 TBC1D2BQ9UPU7 963 aa23.15■■□□□ 1.3
TSFM-208ENST00000543727 ANKRD36CQ5JPF3 1778 aa23.14■■□□□ 1.3
TSFM-208ENST00000543727 PIP4K2AP48426 406 aaPredicted RBP23.14■■□□□ 1.29
TSFM-208ENST00000543727 KRT24Q2M2I5 525 aa23.14■■□□□ 1.29
TSFM-208ENST00000543727 MYH16Q9H6N6 1097 aa23.14■■□□□ 1.29
TSFM-208ENST00000543727 DDX21Q9NR30 783 aaKnown RBP eCLIP23.14■■□□□ 1.29
TSFM-208ENST00000543727 C10orf71Q711Q0 1435 aa23.14■■□□□ 1.29
TSFM-208ENST00000543727 ERVV-1B6SEH8 477 aa23.13■■□□□ 1.29
TSFM-208ENST00000543727 KIF6Q6ZMV9 814 aa23.13■■□□□ 1.29
TSFM-208ENST00000543727 DBF4Q9UBU7 674 aaPredicted RBP23.13■■□□□ 1.29
TSFM-208ENST00000543727 SALL2Q9Y467 1007 aaPredicted RBP23.13■■□□□ 1.29
TSFM-208ENST00000543727 FANCIQ9NVI1 1328 aa23.12■■□□□ 1.29
TSFM-208ENST00000543727 PDIA6Q15084 440 aa23.12■■□□□ 1.29
TSFM-208ENST00000543727 CARMIL3Q8ND23 1372 aa23.12■■□□□ 1.29
TSFM-208ENST00000543727 KIAA1551Q9HCM1 1747 aa23.11■■□□□ 1.29
TSFM-208ENST00000543727 POLRMTO00411 1230 aaKnown RBP23.11■■□□□ 1.29
TSFM-208ENST00000543727 NFIXQ14938 502 aa23.11■■□□□ 1.29
TSFM-208ENST00000543727 LRP10Q7Z4F1 713 aa23.11■■□□□ 1.29
TSFM-208ENST00000543727 TSR2Q969E8 191 aaKnown RBP23.11■■□□□ 1.29
TSFM-208ENST00000543727 MAP3K15Q6ZN16 1313 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms