RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 NRXN2Q9P2S2 1712 aa12.99□□□□□ -0.33
VEGFB-204ENST00000543462 NUP98P52948 1817 aa12.98□□□□□ -0.33
VEGFB-204ENST00000543462 GIGYF1O75420 1035 aaPredicted RBP12.98□□□□□ -0.33
VEGFB-204ENST00000543462 SSFA2P28290 1259 aa12.98□□□□□ -0.33
VEGFB-204ENST00000543462 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
VEGFB-204ENST00000543462 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
VEGFB-204ENST00000543462 KIAA1551Q9HCM1 1747 aa12.97□□□□□ -0.33
VEGFB-204ENST00000543462 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
VEGFB-204ENST00000543462 CALD1Q05682 793 aaKnown RBP12.97□□□□□ -0.33
VEGFB-204ENST00000543462 COL23A1Q86Y22 540 aaPredicted RBP12.97□□□□□ -0.33
VEGFB-204ENST00000543462 CCDC87Q9NVE4 849 aa12.97□□□□□ -0.33
VEGFB-204ENST00000543462 ZBTB1Q9Y2K1 713 aa12.97□□□□□ -0.33
VEGFB-204ENST00000543462 AFDNP55196 1824 aaKnown RBP12.97□□□□□ -0.33
VEGFB-204ENST00000543462 GNPATO15228 680 aa12.96□□□□□ -0.33
VEGFB-204ENST00000543462 RPS6KA4O75676 772 aa12.96□□□□□ -0.33
VEGFB-204ENST00000543462 SNRPA1P09661 255 aaKnown RBP12.96□□□□□ -0.33
VEGFB-204ENST00000543462 ADRA2BP18089 450 aa12.96□□□□□ -0.33
VEGFB-204ENST00000543462 GNAI1P63096 354 aa12.96□□□□□ -0.33
VEGFB-204ENST00000543462 WDR63Q8IWG1 891 aa12.96□□□□□ -0.33
VEGFB-204ENST00000543462 AK7Q96M32 723 aa12.96□□□□□ -0.33
VEGFB-204ENST00000543462 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
VEGFB-204ENST00000543462 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
VEGFB-204ENST00000543462 USP16Q9Y5T5 823 aa12.96□□□□□ -0.33
VEGFB-204ENST00000543462 ARFGEF2Q9Y6D5 1785 aa12.96□□□□□ -0.34
VEGFB-204ENST00000543462 COL15A1P39059 1388 aa12.95□□□□□ -0.34
VEGFB-204ENST00000543462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
VEGFB-204ENST00000543462 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
VEGFB-204ENST00000543462 SMIM5Q71RC9 77 aa12.95□□□□□ -0.34
VEGFB-204ENST00000543462 LRP10Q7Z4F1 713 aa12.95□□□□□ -0.34
VEGFB-204ENST00000543462 SPINK5Q9NQ38 1064 aaPredicted RBP12.95□□□□□ -0.34
VEGFB-204ENST00000543462 TFCP2L1Q9NZI6 479 aa12.95□□□□□ -0.34
VEGFB-204ENST00000543462 SRCAPQ6ZRS2 3230 aa12.94□□□□□ -0.34
VEGFB-204ENST00000543462 FANCIQ9NVI1 1328 aa12.94□□□□□ -0.34
VEGFB-204ENST00000543462 NBPF26B4DH59 902 aa12.94□□□□□ -0.34
VEGFB-204ENST00000543462 HOXB7P09629 217 aa12.94□□□□□ -0.34
VEGFB-204ENST00000543462 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
VEGFB-204ENST00000543462 NBPF10Q6P3W6 841 aaKnown RBP12.94□□□□□ -0.34
VEGFB-204ENST00000543462 NBPF15Q8N660 670 aa12.94□□□□□ -0.34
VEGFB-204ENST00000543462 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
VEGFB-204ENST00000543462 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
VEGFB-204ENST00000543462 STARD3NLO95772 234 aa12.93□□□□□ -0.34
VEGFB-204ENST00000543462 FLAD1Q8NFF5 587 aa12.93□□□□□ -0.34
VEGFB-204ENST00000543462 SLC16A10Q8TF71 515 aa12.93□□□□□ -0.34
VEGFB-204ENST00000543462 N4BP2Q86UW6 1770 aaPredicted RBP12.92□□□□□ -0.34
VEGFB-204ENST00000543462 A1BGP04217 495 aa12.92□□□□□ -0.34
VEGFB-204ENST00000543462 BRCA1P38398 1863 aaKnown RBP12.92□□□□□ -0.34
VEGFB-204ENST00000543462 IL6STP40189 918 aaPredicted RBP12.92□□□□□ -0.34
VEGFB-204ENST00000543462 PTGER2P43116 358 aa12.92□□□□□ -0.34
VEGFB-204ENST00000543462 TSR2Q969E8 191 aaKnown RBP12.92□□□□□ -0.34
VEGFB-204ENST00000543462 MTFR1LQ9H019 292 aa12.92□□□□□ -0.34
VEGFB-204ENST00000543462 RTCBQ9Y3I0 505 aaKnown RBP12.92□□□□□ -0.34
VEGFB-204ENST00000543462 ANKRD31Q8N7Z5 1873 aa12.91□□□□□ -0.34
VEGFB-204ENST00000543462 PDIA6Q15084 440 aa12.91□□□□□ -0.34
VEGFB-204ENST00000543462 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
VEGFB-204ENST00000543462 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
VEGFB-204ENST00000543462 DLEC1Q9Y238 1755 aa12.91□□□□□ -0.34
VEGFB-204ENST00000543462 PHF14O94880 888 aa12.9□□□□□ -0.34
VEGFB-204ENST00000543462 TSPYL6Q8N831 410 aa12.9□□□□□ -0.34
VEGFB-204ENST00000543462 C8orf58Q8NAV2 365 aa12.9□□□□□ -0.34
VEGFB-204ENST00000543462 BCL2L12Q9HB09 334 aa12.9□□□□□ -0.34
VEGFB-204ENST00000543462 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
VEGFB-204ENST00000543462 LAS1LQ9Y4W2 734 aaKnown RBP12.9□□□□□ -0.34
VEGFB-204ENST00000543462 ZBTB7AO95365 584 aa12.89□□□□□ -0.35
VEGFB-204ENST00000543462 GYS1P13807 737 aa12.89□□□□□ -0.35
VEGFB-204ENST00000543462 PROSER3Q2NL68 480 aa12.89□□□□□ -0.35
VEGFB-204ENST00000543462 DUSP27Q5VZP5 1158 aa12.89□□□□□ -0.35
VEGFB-204ENST00000543462 RGL2O15211 777 aa12.88□□□□□ -0.35
VEGFB-204ENST00000543462 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
VEGFB-204ENST00000543462 PIP4K2AP48426 406 aaPredicted RBP12.88□□□□□ -0.35
VEGFB-204ENST00000543462 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
VEGFB-204ENST00000543462 TRAPPC3LQ5T215 181 aa12.88□□□□□ -0.35
VEGFB-204ENST00000543462 SRP68Q9UHB9 627 aaKnown RBP12.88□□□□□ -0.35
VEGFB-204ENST00000543462 NARFQ9UHQ1 456 aa12.88□□□□□ -0.35
VEGFB-204ENST00000543462 LAMB2P55268 1798 aa12.88□□□□□ -0.35
VEGFB-204ENST00000543462 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
VEGFB-204ENST00000543462 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
VEGFB-204ENST00000543462 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
VEGFB-204ENST00000543462 ATP10DQ9P241 1426 aa12.87□□□□□ -0.35
VEGFB-204ENST00000543462 ZBED9Q6R2W3 1325 aa12.87□□□□□ -0.35
VEGFB-204ENST00000543462 E9PSI1 815 aa12.86□□□□□ -0.35
VEGFB-204ENST00000543462 CDCA7LQ96GN5 454 aa12.86□□□□□ -0.35
VEGFB-204ENST00000543462 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
VEGFB-204ENST00000543462 DDX21Q9NR30 783 aaKnown RBP eCLIP12.86□□□□□ -0.35
VEGFB-204ENST00000543462 C10orf71Q711Q0 1435 aa12.86□□□□□ -0.35
VEGFB-204ENST00000543462 A0A087WZG4 1122 aa12.85□□□□□ -0.35
VEGFB-204ENST00000543462 RFC4P35249 363 aa12.85□□□□□ -0.35
VEGFB-204ENST00000543462 FKBP8Q14318 412 aa12.85□□□□□ -0.35
VEGFB-204ENST00000543462 HDGFL1Q5TGJ6 251 aa12.85□□□□□ -0.35
VEGFB-204ENST00000543462 MYH16Q9H6N6 1097 aa12.85□□□□□ -0.35
VEGFB-204ENST00000543462 CHPF2Q9P2E5 772 aa12.85□□□□□ -0.35
VEGFB-204ENST00000543462 TNRC6CQ9HCJ0 1690 aaKnown RBP12.85□□□□□ -0.35
VEGFB-204ENST00000543462 VAMP4O75379 141 aa12.84□□□□□ -0.35
VEGFB-204ENST00000543462 ANXA1P04083 346 aa12.84□□□□□ -0.35
VEGFB-204ENST00000543462 EXOSC9Q06265 439 aaKnown RBP12.84□□□□□ -0.35
VEGFB-204ENST00000543462 DDR1Q08345 913 aa12.84□□□□□ -0.35
VEGFB-204ENST00000543462 TWISTNBQ3B726 338 aaPredicted RBP12.84□□□□□ -0.35
VEGFB-204ENST00000543462 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
VEGFB-204ENST00000543462 MSL1Q68DK7 614 aa12.84□□□□□ -0.35
VEGFB-204ENST00000543462 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
VEGFB-204ENST00000543462 DDX60Q8IY21 1712 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms