RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 PHF14O94880 888 aa18.54■□□□□ 0.56
DDX11-221ENST00000542661 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
DDX11-221ENST00000542661 CCDC27Q2M243 656 aa18.53■□□□□ 0.56
DDX11-221ENST00000542661 AMIGO3Q86WK7 504 aa18.52■□□□□ 0.56
DDX11-221ENST00000542661 NGEFQ8N5V2 710 aa18.52■□□□□ 0.56
DDX11-221ENST00000542661 ATF5Q9Y2D1 282 aaPredicted RBP18.52■□□□□ 0.56
DDX11-221ENST00000542661 CHL1O00533 1208 aa18.51■□□□□ 0.55
DDX11-221ENST00000542661 EIF4A1P60842 406 aaKnown RBP18.51■□□□□ 0.55
DDX11-221ENST00000542661 RFC4P35249 363 aa18.5■□□□□ 0.55
DDX11-221ENST00000542661 ARHGEF1Q92888 912 aaKnown RBP18.5■□□□□ 0.55
DDX11-221ENST00000542661 CFAP44Q96MT7 982 aa18.5■□□□□ 0.55
DDX11-221ENST00000542661 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
DDX11-221ENST00000542661 SOS1Q07889 1333 aaPredicted RBP18.49■□□□□ 0.55
DDX11-221ENST00000542661 GIGYF1O75420 1035 aaPredicted RBP18.49■□□□□ 0.55
DDX11-221ENST00000542661 POLD1P28340 1107 aa18.49■□□□□ 0.55
DDX11-221ENST00000542661 PTGER2P43116 358 aa18.49■□□□□ 0.55
DDX11-221ENST00000542661 IFT57Q9NWB7 429 aa18.49■□□□□ 0.55
DDX11-221ENST00000542661 ZBTB1Q9Y2K1 713 aa18.49■□□□□ 0.55
DDX11-221ENST00000542661 GNAI1P63096 354 aa18.48■□□□□ 0.55
DDX11-221ENST00000542661 SMIM5Q71RC9 77 aa18.48■□□□□ 0.55
DDX11-221ENST00000542661 WWC1Q8IX03 1113 aa18.48■□□□□ 0.55
DDX11-221ENST00000542661 PPP1R1BQ9UD71 204 aaPredicted RBP18.48■□□□□ 0.55
DDX11-221ENST00000542661 USP16Q9Y5T5 823 aa18.48■□□□□ 0.55
DDX11-221ENST00000542661 A0A087WZG4 1122 aa18.47■□□□□ 0.55
DDX11-221ENST00000542661 CANXP27824 592 aaKnown RBP18.47■□□□□ 0.55
DDX11-221ENST00000542661 NPM2Q86SE8 214 aaKnown RBP18.47■□□□□ 0.55
DDX11-221ENST00000542661 MIER1Q8N108 512 aa18.47■□□□□ 0.55
DDX11-221ENST00000542661 SGIP1Q9BQI5 828 aa18.47■□□□□ 0.55
DDX11-221ENST00000542661 COL24A1Q17RW2 1714 aa18.46■□□□□ 0.55
DDX11-221ENST00000542661 A1BGP04217 495 aa18.46■□□□□ 0.55
DDX11-221ENST00000542661 ZNF853P0CG23 659 aa18.46■□□□□ 0.55
DDX11-221ENST00000542661 IL6STP40189 918 aaPredicted RBP18.46■□□□□ 0.55
DDX11-221ENST00000542661 NLGN1Q8N2Q7 840 aa18.46■□□□□ 0.55
DDX11-221ENST00000542661 IL16Q14005 1332 aa18.46■□□□□ 0.55
DDX11-221ENST00000542661 COL15A1P39059 1388 aa18.45■□□□□ 0.54
DDX11-221ENST00000542661 PRAMEF22A3QJZ6 481 aa18.45■□□□□ 0.54
DDX11-221ENST00000542661 ZPR1O75312 459 aa18.45■□□□□ 0.54
DDX11-221ENST00000542661 EIF5P55010 431 aaKnown RBP18.45■□□□□ 0.54
DDX11-221ENST00000542661 LAMB4A4D0S4 1761 aa18.45■□□□□ 0.54
DDX11-221ENST00000542661 C4AP0C0L4 1744 aa18.44■□□□□ 0.54
DDX11-221ENST00000542661 MSL1Q68DK7 614 aa18.44■□□□□ 0.54
DDX11-221ENST00000542661 ARXQ96QS3 562 aa18.44■□□□□ 0.54
DDX11-221ENST00000542661 MBIPQ9NS73 344 aa18.44■□□□□ 0.54
DDX11-221ENST00000542661 WDR63Q8IWG1 891 aa18.43■□□□□ 0.54
DDX11-221ENST00000542661 NARFQ9UHQ1 456 aa18.43■□□□□ 0.54
DDX11-221ENST00000542661 USP42Q9H9J4 1324 aaKnown RBP18.43■□□□□ 0.54
DDX11-221ENST00000542661 SENP3-EIF4A1A0A087X0R7 540 aa18.42■□□□□ 0.54
DDX11-221ENST00000542661 HOXB7P09629 217 aa18.42■□□□□ 0.54
DDX11-221ENST00000542661 GYS1P13807 737 aa18.42■□□□□ 0.54
DDX11-221ENST00000542661 ZNF330Q9Y3S2 320 aaPredicted RBP18.42■□□□□ 0.54
DDX11-221ENST00000542661 ERBB4Q15303 1308 aa18.42■□□□□ 0.54
DDX11-221ENST00000542661 SALL2Q9Y467 1007 aaPredicted RBP18.41■□□□□ 0.54
DDX11-221ENST00000542661 CHMP4AQ9BY43 222 aa18.4■□□□□ 0.54
DDX11-221ENST00000542661 SRP68Q9UHB9 627 aaKnown RBP18.4■□□□□ 0.54
DDX11-221ENST00000542661 NBPF26B4DH59 902 aa18.39■□□□□ 0.53
DDX11-221ENST00000542661 USPL1Q5W0Q7 1092 aa18.39■□□□□ 0.53
DDX11-221ENST00000542661 NBPF10Q6P3W6 841 aaKnown RBP18.39■□□□□ 0.53
DDX11-221ENST00000542661 NBPF15Q8N660 670 aa18.39■□□□□ 0.53
DDX11-221ENST00000542661 MMP10P09238 476 aa18.38■□□□□ 0.53
DDX11-221ENST00000542661 EIF2S2P20042 333 aaKnown RBP18.38■□□□□ 0.53
DDX11-221ENST00000542661 PIP4K2AP48426 406 aaPredicted RBP18.37■□□□□ 0.53
DDX11-221ENST00000542661 FKBP8Q14318 412 aa18.37■□□□□ 0.53
DDX11-221ENST00000542661 DUSP27Q5VZP5 1158 aa18.37■□□□□ 0.53
DDX11-221ENST00000542661 DZIP3Q86Y13 1208 aaKnown RBP18.37■□□□□ 0.53
DDX11-221ENST00000542661 TBC1D2BQ9UPU7 963 aa18.37■□□□□ 0.53
DDX11-221ENST00000542661 RGL2O15211 777 aa18.36■□□□□ 0.53
DDX11-221ENST00000542661 KRT24Q2M2I5 525 aa18.36■□□□□ 0.53
DDX11-221ENST00000542661 PARP3Q9Y6F1 533 aa18.36■□□□□ 0.53
DDX11-221ENST00000542661 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
DDX11-221ENST00000542661 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
DDX11-221ENST00000542661 FHDC1Q9C0D6 1143 aaPredicted RBP18.35■□□□□ 0.53
DDX11-221ENST00000542661 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
DDX11-221ENST00000542661 ZNF652Q9Y2D9 606 aa18.35■□□□□ 0.53
DDX11-221ENST00000542661 CAMTA2O94983 1202 aa18.34■□□□□ 0.53
DDX11-221ENST00000542661 MYL6BP14649 208 aa18.34■□□□□ 0.53
DDX11-221ENST00000542661 CLEC4GQ6UXB4 293 aa18.34■□□□□ 0.53
DDX11-221ENST00000542661 SCN7AQ01118 1682 aa18.34■□□□□ 0.53
DDX11-221ENST00000542661 ZNF521Q96K83 1311 aa18.33■□□□□ 0.53
DDX11-221ENST00000542661 TM4SF1P30408 202 aa18.33■□□□□ 0.52
DDX11-221ENST00000542661 GOLGA2Q08379 1002 aa18.33■□□□□ 0.52
DDX11-221ENST00000542661 PDIA6Q15084 440 aa18.33■□□□□ 0.52
DDX11-221ENST00000542661 KIF6Q6ZMV9 814 aa18.33■□□□□ 0.52
DDX11-221ENST00000542661 C8orf58Q8NAV2 365 aa18.33■□□□□ 0.52
DDX11-221ENST00000542661 SYT17Q9BSW7 474 aa18.33■□□□□ 0.52
DDX11-221ENST00000542661 BCL2L12Q9HB09 334 aa18.33■□□□□ 0.52
DDX11-221ENST00000542661 DDX21Q9NR30 783 aaKnown RBP eCLIP18.33■□□□□ 0.52
DDX11-221ENST00000542661 DBF4Q9UBU7 674 aaPredicted RBP18.33■□□□□ 0.52
DDX11-221ENST00000542661 CD2APQ9Y5K6 639 aa18.33■□□□□ 0.52
DDX11-221ENST00000542661 FANCIQ9NVI1 1328 aa18.32■□□□□ 0.52
DDX11-221ENST00000542661 NECTIN2Q92692 538 aa18.32■□□□□ 0.52
DDX11-221ENST00000542661 ERVV-1B6SEH8 477 aa18.31■□□□□ 0.52
DDX11-221ENST00000542661 ELL2O00472 640 aaPredicted RBP18.31■□□□□ 0.52
DDX11-221ENST00000542661 NFIXQ14938 502 aa18.31■□□□□ 0.52
DDX11-221ENST00000542661 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
DDX11-221ENST00000542661 BCORQ6W2J9 1755 aa18.31■□□□□ 0.52
DDX11-221ENST00000542661 MAP3K15Q6ZN16 1313 aa18.3■□□□□ 0.52
DDX11-221ENST00000542661 POLRMTO00411 1230 aaKnown RBP18.3■□□□□ 0.52
DDX11-221ENST00000542661 CCDC30Q5VVM6 783 aa18.3■□□□□ 0.52
DDX11-221ENST00000542661 HYPKQ9NX55 129 aa18.3■□□□□ 0.52
DDX11-221ENST00000542661 CHPF2Q9P2E5 772 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms