RNA–Protein interactions for RNA: ENST00000542479.1

AP000943.2-204, humanhuman

TSL 4

Gene AP000943.2, Length 532 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000943.2-204ENST00000542479 ZBTB1Q9Y2K1 713 aa18.79■□□□□ 0.6
AP000943.2-204ENST00000542479 PRAMEF22A3QJZ6 481 aa18.78■□□□□ 0.6
AP000943.2-204ENST00000542479 MMP10P09238 476 aa18.78■□□□□ 0.6
AP000943.2-204ENST00000542479 RFC4P35249 363 aa18.78■□□□□ 0.6
AP000943.2-204ENST00000542479 VSIG10Q8N0Z9 540 aa18.78■□□□□ 0.6
AP000943.2-204ENST00000542479 RTF1Q92541 710 aaKnown RBP18.78■□□□□ 0.6
AP000943.2-204ENST00000542479 MIS18AQ9NYP9 233 aa18.78■□□□□ 0.6
AP000943.2-204ENST00000542479 HEG1Q9ULI3 1381 aa18.78■□□□□ 0.6
AP000943.2-204ENST00000542479 SOS1Q07889 1333 aaPredicted RBP18.77■□□□□ 0.6
AP000943.2-204ENST00000542479 NFE2L2Q16236 605 aa18.77■□□□□ 0.6
AP000943.2-204ENST00000542479 HTATSF1O43719 755 aaKnown RBP18.76■□□□□ 0.59
AP000943.2-204ENST00000542479 FKBP8Q14318 412 aa18.76■□□□□ 0.59
AP000943.2-204ENST00000542479 CCDC146Q8IYE0 955 aa18.76■□□□□ 0.59
AP000943.2-204ENST00000542479 USP42Q9H9J4 1324 aaKnown RBP18.75■□□□□ 0.59
AP000943.2-204ENST00000542479 CANXP27824 592 aaKnown RBP18.75■□□□□ 0.59
AP000943.2-204ENST00000542479 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
AP000943.2-204ENST00000542479 FMNL2Q96PY5 1086 aa18.74■□□□□ 0.59
AP000943.2-204ENST00000542479 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
AP000943.2-204ENST00000542479 A1BGP04217 495 aa18.73■□□□□ 0.59
AP000943.2-204ENST00000542479 YBX3P16989 372 aaKnown RBP eCLIP18.73■□□□□ 0.59
AP000943.2-204ENST00000542479 TAF7Q15545 349 aaPredicted RBP18.73■□□□□ 0.59
AP000943.2-204ENST00000542479 CCDC184Q52MB2 194 aa18.73■□□□□ 0.59
AP000943.2-204ENST00000542479 USPL1Q5W0Q7 1092 aa18.73■□□□□ 0.59
AP000943.2-204ENST00000542479 PELP1Q8IZL8 1130 aaKnown RBP18.73■□□□□ 0.59
AP000943.2-204ENST00000542479 NLGN1Q8N2Q7 840 aa18.73■□□□□ 0.59
AP000943.2-204ENST00000542479 WWC3Q9ULE0 1092 aa18.73■□□□□ 0.59
AP000943.2-204ENST00000542479 ADAMTS8Q9UP79 889 aa18.73■□□□□ 0.59
AP000943.2-204ENST00000542479 CD2APQ9Y5K6 639 aa18.73■□□□□ 0.59
AP000943.2-204ENST00000542479 USP16Q9Y5T5 823 aa18.73■□□□□ 0.59
AP000943.2-204ENST00000542479 MAPK8IP3Q9UPT6 1336 aa18.73■□□□□ 0.59
AP000943.2-204ENST00000542479 COL15A1P39059 1388 aa18.72■□□□□ 0.59
AP000943.2-204ENST00000542479 STARD3NLO95772 234 aa18.72■□□□□ 0.59
AP000943.2-204ENST00000542479 NEFMP07197 916 aa18.72■□□□□ 0.59
AP000943.2-204ENST00000542479 PIP4K2AP48426 406 aaPredicted RBP18.72■□□□□ 0.59
AP000943.2-204ENST00000542479 DDR1Q08345 913 aa18.72■□□□□ 0.59
AP000943.2-204ENST00000542479 GPR162Q16538 588 aa18.72■□□□□ 0.59
AP000943.2-204ENST00000542479 RRP7AQ9Y3A4 280 aaKnown RBP18.72■□□□□ 0.59
AP000943.2-204ENST00000542479 KDM3BQ7LBC6 1761 aa18.72■□□□□ 0.59
AP000943.2-204ENST00000542479 KIF13BQ9NQT8 1826 aa18.72■□□□□ 0.59
AP000943.2-204ENST00000542479 KIAA1551Q9HCM1 1747 aa18.71■□□□□ 0.59
AP000943.2-204ENST00000542479 N4BP2Q86UW6 1770 aaPredicted RBP18.71■□□□□ 0.59
AP000943.2-204ENST00000542479 EIF5P55010 431 aaKnown RBP18.71■□□□□ 0.59
AP000943.2-204ENST00000542479 BCL2L12Q9HB09 334 aa18.71■□□□□ 0.59
AP000943.2-204ENST00000542479 TMPOP42166 694 aaKnown RBP18.7■□□□□ 0.58
AP000943.2-204ENST00000542479 RIPK4P57078 832 aa18.7■□□□□ 0.58
AP000943.2-204ENST00000542479 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
AP000943.2-204ENST00000542479 CHD4Q14839 1912 aa18.69■□□□□ 0.58
AP000943.2-204ENST00000542479 ZPR1O75312 459 aa18.69■□□□□ 0.58
AP000943.2-204ENST00000542479 YY1P25490 414 aa18.69■□□□□ 0.58
AP000943.2-204ENST00000542479 TM4SF1P30408 202 aa18.69■□□□□ 0.58
AP000943.2-204ENST00000542479 TEX13AQ9BXU3 409 aaPredicted RBP18.69■□□□□ 0.58
AP000943.2-204ENST00000542479 NARFQ9UHQ1 456 aa18.69■□□□□ 0.58
AP000943.2-204ENST00000542479 AFDNP55196 1824 aaKnown RBP18.68■□□□□ 0.58
AP000943.2-204ENST00000542479 WDR43Q15061 677 aaKnown RBP eCLIP18.68■□□□□ 0.58
AP000943.2-204ENST00000542479 NEUROD2Q15784 382 aa18.68■□□□□ 0.58
AP000943.2-204ENST00000542479 CAPN15O75808 1086 aa18.67■□□□□ 0.58
AP000943.2-204ENST00000542479 TBC1D2BQ9UPU7 963 aa18.67■□□□□ 0.58
AP000943.2-204ENST00000542479 ZNF330Q9Y3S2 320 aaPredicted RBP18.67■□□□□ 0.58
AP000943.2-204ENST00000542479 PARP3Q9Y6F1 533 aa18.67■□□□□ 0.58
AP000943.2-204ENST00000542479 C10orf71Q711Q0 1435 aa18.66■□□□□ 0.58
AP000943.2-204ENST00000542479 POLRMTO00411 1230 aaKnown RBP18.66■□□□□ 0.58
AP000943.2-204ENST00000542479 SNRPA1P09661 255 aaKnown RBP18.66■□□□□ 0.58
AP000943.2-204ENST00000542479 NFIXQ14938 502 aa18.66■□□□□ 0.58
AP000943.2-204ENST00000542479 RUNDC1Q96C34 613 aa18.66■□□□□ 0.58
AP000943.2-204ENST00000542479 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
AP000943.2-204ENST00000542479 A0A0G2JLW4 131 aa18.65■□□□□ 0.58
AP000943.2-204ENST00000542479 NBPF26B4DH59 902 aa18.65■□□□□ 0.58
AP000943.2-204ENST00000542479 EIF4A1P60842 406 aaKnown RBP18.65■□□□□ 0.58
AP000943.2-204ENST00000542479 NBPF10Q6P3W6 841 aaKnown RBP18.65■□□□□ 0.58
AP000943.2-204ENST00000542479 NBPF15Q8N660 670 aa18.65■□□□□ 0.58
AP000943.2-204ENST00000542479 TRIM35Q9UPQ4 493 aa18.65■□□□□ 0.58
AP000943.2-204ENST00000542479 IL6STP40189 918 aaPredicted RBP18.64■□□□□ 0.57
AP000943.2-204ENST00000542479 SCN7AQ01118 1682 aa18.63■□□□□ 0.57
AP000943.2-204ENST00000542479 LAMB4A4D0S4 1761 aa18.63■□□□□ 0.57
AP000943.2-204ENST00000542479 BRCA1P38398 1863 aaKnown RBP18.63■□□□□ 0.57
AP000943.2-204ENST00000542479 GIGYF1O75420 1035 aaPredicted RBP18.62■□□□□ 0.57
AP000943.2-204ENST00000542479 CAMTA2O94983 1202 aa18.62■□□□□ 0.57
AP000943.2-204ENST00000542479 DPEP1P16444 411 aa18.62■□□□□ 0.57
AP000943.2-204ENST00000542479 KCNA3P22001 575 aa18.62■□□□□ 0.57
AP000943.2-204ENST00000542479 TBC1D9BQ66K14 1250 aa18.62■□□□□ 0.57
AP000943.2-204ENST00000542479 BICDL1Q6ZP65 573 aa18.62■□□□□ 0.57
AP000943.2-204ENST00000542479 PNISRQ8TF01 805 aaKnown RBP18.62■□□□□ 0.57
AP000943.2-204ENST00000542479 NRXN2Q9P2S2 1712 aa18.62■□□□□ 0.57
AP000943.2-204ENST00000542479 BCORQ6W2J9 1755 aa18.61■□□□□ 0.57
AP000943.2-204ENST00000542479 A0A087WZG4 1122 aa18.61■□□□□ 0.57
AP000943.2-204ENST00000542479 SENP3-EIF4A1A0A087X0R7 540 aa18.61■□□□□ 0.57
AP000943.2-204ENST00000542479 TSPYL4Q9UJ04 414 aa18.6■□□□□ 0.57
AP000943.2-204ENST00000542479 SERPINB2P05120 415 aa18.59■□□□□ 0.57
AP000943.2-204ENST00000542479 CHRNA5P30532 468 aa18.59■□□□□ 0.57
AP000943.2-204ENST00000542479 TGFB2P61812 414 aa18.59■□□□□ 0.57
AP000943.2-204ENST00000542479 DZIP3Q86Y13 1208 aaKnown RBP18.59■□□□□ 0.57
AP000943.2-204ENST00000542479 APAF1O14727 1248 aa18.58■□□□□ 0.56
AP000943.2-204ENST00000542479 KRT24Q2M2I5 525 aa18.58■□□□□ 0.56
AP000943.2-204ENST00000542479 CCDC24Q8N4L8 307 aa18.58■□□□□ 0.56
AP000943.2-204ENST00000542479 CARMIL3Q8ND23 1372 aa18.57■□□□□ 0.56
AP000943.2-204ENST00000542479 ANKRD31Q8N7Z5 1873 aa18.57■□□□□ 0.56
AP000943.2-204ENST00000542479 GRIN3BO60391 1043 aa18.57■□□□□ 0.56
AP000943.2-204ENST00000542479 NGEFQ8N5V2 710 aa18.57■□□□□ 0.56
AP000943.2-204ENST00000542479 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
AP000943.2-204ENST00000542479 LAS1LQ9Y4W2 734 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms