RNA–Protein interactions for RNA: ENST00000542064.1

AP000439.2-201, humanhuman

TSL 2 BASIC

Gene AP000439.2, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.2-201ENST00000542064 FLAD1Q8NFF5 587 aa17.03■□□□□ 0.32
AP000439.2-201ENST00000542064 RRP7AQ9Y3A4 280 aaKnown RBP17.03■□□□□ 0.32
AP000439.2-201ENST00000542064 USP42Q9H9J4 1324 aaKnown RBP17.02■□□□□ 0.32
AP000439.2-201ENST00000542064 BRCA1P38398 1863 aaKnown RBP17.02■□□□□ 0.32
AP000439.2-201ENST00000542064 SENP3-EIF4A1A0A087X0R7 540 aa17.02■□□□□ 0.32
AP000439.2-201ENST00000542064 BCL2L12Q9HB09 334 aa17.02■□□□□ 0.32
AP000439.2-201ENST00000542064 COL15A1P39059 1388 aa17.02■□□□□ 0.31
AP000439.2-201ENST00000542064 BTBD11A6QL63 1104 aa17.01■□□□□ 0.31
AP000439.2-201ENST00000542064 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
AP000439.2-201ENST00000542064 CHD4Q14839 1912 aa17.01■□□□□ 0.31
AP000439.2-201ENST00000542064 PXDNLA1KZ92 1463 aa17■□□□□ 0.31
AP000439.2-201ENST00000542064 A1BGP04217 495 aa17■□□□□ 0.31
AP000439.2-201ENST00000542064 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
AP000439.2-201ENST00000542064 C10orf71Q711Q0 1435 aa17■□□□□ 0.31
AP000439.2-201ENST00000542064 PELP1Q8IZL8 1130 aaKnown RBP17■□□□□ 0.31
AP000439.2-201ENST00000542064 NRXN2Q9P2S2 1712 aa16.99■□□□□ 0.31
AP000439.2-201ENST00000542064 USPL1Q5W0Q7 1092 aa16.99■□□□□ 0.31
AP000439.2-201ENST00000542064 TTC5Q8N0Z6 440 aa16.99■□□□□ 0.31
AP000439.2-201ENST00000542064 USP16Q9Y5T5 823 aa16.99■□□□□ 0.31
AP000439.2-201ENST00000542064 RFC4P35249 363 aa16.98■□□□□ 0.31
AP000439.2-201ENST00000542064 ADAMTS8Q9UP79 889 aa16.98■□□□□ 0.31
AP000439.2-201ENST00000542064 ANKRD31Q8N7Z5 1873 aa16.98■□□□□ 0.31
AP000439.2-201ENST00000542064 ADRA2BP18089 450 aa16.97■□□□□ 0.31
AP000439.2-201ENST00000542064 VSIG10Q8N0Z9 540 aa16.97■□□□□ 0.31
AP000439.2-201ENST00000542064 CARMIL3Q8ND23 1372 aa16.97■□□□□ 0.31
AP000439.2-201ENST00000542064 EIF5P55010 431 aaKnown RBP16.96■□□□□ 0.31
AP000439.2-201ENST00000542064 RTF1Q92541 710 aaKnown RBP16.96■□□□□ 0.31
AP000439.2-201ENST00000542064 FMNL2Q96PY5 1086 aa16.96■□□□□ 0.31
AP000439.2-201ENST00000542064 COL11A2P13942 1736 aaPredicted RBP16.96■□□□□ 0.3
AP000439.2-201ENST00000542064 ZNF316A6NFI3 1004 aaPredicted RBP16.95■□□□□ 0.3
AP000439.2-201ENST00000542064 NBPF26B4DH59 902 aa16.95■□□□□ 0.3
AP000439.2-201ENST00000542064 NBPF10Q6P3W6 841 aaKnown RBP16.95■□□□□ 0.3
AP000439.2-201ENST00000542064 NBPF15Q8N660 670 aa16.95■□□□□ 0.3
AP000439.2-201ENST00000542064 ZNF330Q9Y3S2 320 aaPredicted RBP16.95■□□□□ 0.3
AP000439.2-201ENST00000542064 POLRMTO00411 1230 aaKnown RBP16.94■□□□□ 0.3
AP000439.2-201ENST00000542064 YY1P25490 414 aa16.94■□□□□ 0.3
AP000439.2-201ENST00000542064 TMPOP42166 694 aaKnown RBP16.94■□□□□ 0.3
AP000439.2-201ENST00000542064 NEUROD2Q15784 382 aa16.94■□□□□ 0.3
AP000439.2-201ENST00000542064 GPR162Q16538 588 aa16.94■□□□□ 0.3
AP000439.2-201ENST00000542064 TBC1D2BQ9UPU7 963 aa16.94■□□□□ 0.3
AP000439.2-201ENST00000542064 CD2APQ9Y5K6 639 aa16.94■□□□□ 0.3
AP000439.2-201ENST00000542064 MAPK8IP3Q9UPT6 1336 aa16.94■□□□□ 0.3
AP000439.2-201ENST00000542064 RIPK4P57078 832 aa16.93■□□□□ 0.3
AP000439.2-201ENST00000542064 NFIXQ14938 502 aa16.93■□□□□ 0.3
AP000439.2-201ENST00000542064 KRT24Q2M2I5 525 aa16.93■□□□□ 0.3
AP000439.2-201ENST00000542064 CCDC24Q8N4L8 307 aa16.93■□□□□ 0.3
AP000439.2-201ENST00000542064 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
AP000439.2-201ENST00000542064 A0A0G2JLW4 131 aa16.92■□□□□ 0.3
AP000439.2-201ENST00000542064 HTATSF1O43719 755 aaKnown RBP16.92■□□□□ 0.3
AP000439.2-201ENST00000542064 TM4SF1P30408 202 aa16.92■□□□□ 0.3
AP000439.2-201ENST00000542064 TAF7Q15545 349 aaPredicted RBP16.92■□□□□ 0.3
AP000439.2-201ENST00000542064 NARFQ9UHQ1 456 aa16.92■□□□□ 0.3
AP000439.2-201ENST00000542064 DLEC1Q9Y238 1755 aa16.92■□□□□ 0.3
AP000439.2-201ENST00000542064 DPEP1P16444 411 aa16.91■□□□□ 0.3
AP000439.2-201ENST00000542064 EIF4A1P60842 406 aaKnown RBP16.91■□□□□ 0.3
AP000439.2-201ENST00000542064 BICDL1Q6ZP65 573 aa16.91■□□□□ 0.3
AP000439.2-201ENST00000542064 NLGN1Q8N2Q7 840 aa16.91■□□□□ 0.3
AP000439.2-201ENST00000542064 CAMTA2O94983 1202 aa16.9■□□□□ 0.3
AP000439.2-201ENST00000542064 KCNA3P22001 575 aa16.9■□□□□ 0.3
AP000439.2-201ENST00000542064 TBC1D9BQ66K14 1250 aa16.9■□□□□ 0.3
AP000439.2-201ENST00000542064 CACNA1SQ13698 1873 aa16.9■□□□□ 0.3
AP000439.2-201ENST00000542064 STARD3NLO95772 234 aa16.89■□□□□ 0.29
AP000439.2-201ENST00000542064 CHRNA5P30532 468 aa16.89■□□□□ 0.29
AP000439.2-201ENST00000542064 PARP3Q9Y6F1 533 aa16.89■□□□□ 0.29
AP000439.2-201ENST00000542064 ZPR1O75312 459 aa16.88■□□□□ 0.29
AP000439.2-201ENST00000542064 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
AP000439.2-201ENST00000542064 NUP98P52948 1817 aa16.88■□□□□ 0.29
AP000439.2-201ENST00000542064 ARFGEF1Q9Y6D6 1849 aa16.88■□□□□ 0.29
AP000439.2-201ENST00000542064 TNRC6CQ9HCJ0 1690 aaKnown RBP16.88■□□□□ 0.29
AP000439.2-201ENST00000542064 GIGYF1O75420 1035 aaPredicted RBP16.87■□□□□ 0.29
AP000439.2-201ENST00000542064 ANXA1P04083 346 aa16.87■□□□□ 0.29
AP000439.2-201ENST00000542064 SNRPA1P09661 255 aaKnown RBP16.87■□□□□ 0.29
AP000439.2-201ENST00000542064 RUNDC1Q96C34 613 aa16.87■□□□□ 0.29
AP000439.2-201ENST00000542064 HMGB2P26583 209 aaKnown RBP16.86■□□□□ 0.29
AP000439.2-201ENST00000542064 IL6STP40189 918 aaPredicted RBP16.86■□□□□ 0.29
AP000439.2-201ENST00000542064 PROSER3Q2NL68 480 aa16.86■□□□□ 0.29
AP000439.2-201ENST00000542064 APAF1O14727 1248 aa16.85■□□□□ 0.29
AP000439.2-201ENST00000542064 HLFQ16534 295 aa16.85■□□□□ 0.29
AP000439.2-201ENST00000542064 NGEFQ8N5V2 710 aa16.85■□□□□ 0.29
AP000439.2-201ENST00000542064 TSPYL4Q9UJ04 414 aa16.85■□□□□ 0.29
AP000439.2-201ENST00000542064 SERPINB2P05120 415 aa16.84■□□□□ 0.29
AP000439.2-201ENST00000542064 NEFMP07197 916 aa16.84■□□□□ 0.29
AP000439.2-201ENST00000542064 TTLL7Q6ZT98 887 aa16.84■□□□□ 0.29
AP000439.2-201ENST00000542064 DZIP3Q86Y13 1208 aaKnown RBP16.84■□□□□ 0.29
AP000439.2-201ENST00000542064 NECTIN2Q92692 538 aa16.84■□□□□ 0.29
AP000439.2-201ENST00000542064 LRP10Q7Z4F1 713 aa16.83■□□□□ 0.28
AP000439.2-201ENST00000542064 ZNF784Q8NCA9 323 aaPredicted RBP16.83■□□□□ 0.28
AP000439.2-201ENST00000542064 TEX13AQ9BXU3 409 aaPredicted RBP16.83■□□□□ 0.28
AP000439.2-201ENST00000542064 DCAF8L1A6NGE4 600 aa16.82■□□□□ 0.28
AP000439.2-201ENST00000542064 BCS1LQ9Y276 419 aa16.82■□□□□ 0.28
AP000439.2-201ENST00000542064 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
AP000439.2-201ENST00000542064 MYL6BP14649 208 aa16.81■□□□□ 0.28
AP000439.2-201ENST00000542064 PDIA6Q15084 440 aa16.81■□□□□ 0.28
AP000439.2-201ENST00000542064 PRR5LQ6MZQ0 368 aa16.81■□□□□ 0.28
AP000439.2-201ENST00000542064 SLC51AQ86UW1 340 aa16.81■□□□□ 0.28
AP000439.2-201ENST00000542064 ADCY9O60503 1353 aa16.8■□□□□ 0.28
AP000439.2-201ENST00000542064 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
AP000439.2-201ENST00000542064 ZNF428Q96B54 188 aa16.8■□□□□ 0.28
AP000439.2-201ENST00000542064 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
AP000439.2-201ENST00000542064 SBF1O95248 1867 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms