RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 NLRP2Q9NX02 1062 aa6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 USP21Q9UK80 565 aa6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 THRAP3Q9Y2W1 955 aaKnown RBP6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 AFF2P51816 1311 aa6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 SPATA31A1Q5TZJ5 1347 aa6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 SPATA31A5Q5VU36 1347 aa6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 SPATA31A7Q8IWB4 1347 aa6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 GRXCR2A6NFK2 248 aa6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 U2SURPO15042 1029 aaKnown RBP6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 ATRNO75882 1429 aa6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 U2AF1L5P0DN76 240 aaPredicted RBP6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 U2AF1Q01081 240 aaKnown RBP eCLIP6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 COL14A1Q05707 1796 aaKnown RBP6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 BARGINQ6ZT62 677 aa6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 TCP11L2Q8N4U5 519 aa6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 LTV1Q96GA3 475 aaPredicted RBP6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 ABCA3Q99758 1704 aa6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 CDCA7Q9BWT1 371 aaPredicted RBP6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 RSPH6AQ9H0K4 717 aa6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 PNNQ9H307 717 aaKnown RBP6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 PEAK1Q9H792 1746 aa6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 STRN4Q9NRL3 753 aa6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 TRPC5Q9UL62 973 aaPredicted RBP6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 ADAMTS8Q9UP79 889 aa6.63□□□□□ -1.35
SPARCL1-209ENST00000541496 COL18A1P39060 1754 aa6.62□□□□□ -1.35
SPARCL1-209ENST00000541496 DISP2A7MBM2 1401 aa6.62□□□□□ -1.35
SPARCL1-209ENST00000541496 MAP3K7O43318 606 aa6.62□□□□□ -1.35
SPARCL1-209ENST00000541496 ONECUT3O60422 494 aaPredicted RBP6.62□□□□□ -1.35
SPARCL1-209ENST00000541496 C6orf132Q5T0Z8 1188 aa6.62□□□□□ -1.35
SPARCL1-209ENST00000541496 SULT6B1Q6IMI4 303 aa6.62□□□□□ -1.35
SPARCL1-209ENST00000541496 AEBP1Q8IUX7 1158 aa6.62□□□□□ -1.35
SPARCL1-209ENST00000541496 GJD4Q96KN9 370 aaPredicted RBP6.62□□□□□ -1.35
SPARCL1-209ENST00000541496 PLEKHF1Q96S99 279 aa6.62□□□□□ -1.35
SPARCL1-209ENST00000541496 IL2RBP14784 551 aa6.61□□□□□ -1.35
SPARCL1-209ENST00000541496 PRKAR2BP31323 418 aa6.61□□□□□ -1.35
SPARCL1-209ENST00000541496 AMOTQ4VCS5 1084 aa6.61□□□□□ -1.35
SPARCL1-209ENST00000541496 SMYD5Q6GMV2 418 aa6.61□□□□□ -1.35
SPARCL1-209ENST00000541496 NGEFQ8N5V2 710 aa6.61□□□□□ -1.35
SPARCL1-209ENST00000541496 RAPGEF4Q8WZA2 1011 aa6.61□□□□□ -1.35
SPARCL1-209ENST00000541496 RUNDC1Q96C34 613 aa6.61□□□□□ -1.35
SPARCL1-209ENST00000541496 ZBED2Q9BTP6 218 aa6.61□□□□□ -1.35
SPARCL1-209ENST00000541496 QTRT2Q9H974 415 aaKnown RBP6.61□□□□□ -1.35
SPARCL1-209ENST00000541496 RGS17Q9UGC6 210 aaPredicted RBP6.61□□□□□ -1.35
SPARCL1-209ENST00000541496 OVOS2A0A0G2JMS6 1433 aa6.6□□□□□ -1.35
SPARCL1-209ENST00000541496 HMOX1P09601 288 aa6.6□□□□□ -1.35
SPARCL1-209ENST00000541496 TATP17735 454 aaPredicted RBP6.6□□□□□ -1.35
SPARCL1-209ENST00000541496 OSBPP22059 807 aa6.6□□□□□ -1.35
SPARCL1-209ENST00000541496 RBM6P78332 1123 aaKnown RBP6.6□□□□□ -1.35
SPARCL1-209ENST00000541496 USHBP1Q8N6Y0 703 aa6.6□□□□□ -1.35
SPARCL1-209ENST00000541496 VPS9D1Q9Y2B5 631 aa6.6□□□□□ -1.35
SPARCL1-209ENST00000541496 NEFMP07197 916 aa6.59□□□□□ -1.35
SPARCL1-209ENST00000541496 PLEKHO1Q53GL0 409 aaPredicted RBP6.59□□□□□ -1.35
SPARCL1-209ENST00000541496 FAM9BQ8IZU0 186 aa6.59□□□□□ -1.35
SPARCL1-209ENST00000541496 GAS2L2Q8NHY3 880 aa6.59□□□□□ -1.35
SPARCL1-209ENST00000541496 PHACTR3Q96KR7 559 aa6.59□□□□□ -1.35
SPARCL1-209ENST00000541496 NBPF3Q9H094 633 aa6.59□□□□□ -1.35
SPARCL1-209ENST00000541496 USP35Q9P2H5 1018 aa6.59□□□□□ -1.35
SPARCL1-209ENST00000541496 HCSTQ9UBK5 93 aa6.59□□□□□ -1.35
SPARCL1-209ENST00000541496 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
SPARCL1-209ENST00000541496 CCDC9Q9Y3X0 531 aaKnown RBP6.59□□□□□ -1.35
SPARCL1-209ENST00000541496 MEGF6O75095 1541 aa6.59□□□□□ -1.35
SPARCL1-209ENST00000541496 RGPD1P0DJD0 1748 aa6.59□□□□□ -1.36
SPARCL1-209ENST00000541496 NWD2Q9ULI1 1742 aa6.59□□□□□ -1.36
SPARCL1-209ENST00000541496 MAPK8IP3Q9UPT6 1336 aa6.58□□□□□ -1.36
SPARCL1-209ENST00000541496 HRO43593 1189 aa6.58□□□□□ -1.36
SPARCL1-209ENST00000541496 HTATSF1O43719 755 aaKnown RBP6.58□□□□□ -1.36
SPARCL1-209ENST00000541496 NFE2L2Q16236 605 aa6.58□□□□□ -1.36
SPARCL1-209ENST00000541496 CCDC27Q2M243 656 aa6.58□□□□□ -1.36
SPARCL1-209ENST00000541496 ZCRB1Q8TBF4 217 aaKnown RBP6.58□□□□□ -1.36
SPARCL1-209ENST00000541496 KCTD12Q96CX2 325 aaKnown RBP6.58□□□□□ -1.36
SPARCL1-209ENST00000541496 PCDH11XQ9BZA7 1347 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 PCDH11YQ9BZA8 1340 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 NRAPQ86VF7 1730 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 TESPA1A2RU30 521 aaPredicted RBP6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 TULP1O00294 542 aaPredicted RBP6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 EXOC5O00471 708 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 APAF1O14727 1248 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 SEMA3EO15041 775 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 HSP90AB1P08238 724 aaKnown RBP6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 RXRBP28702 533 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 TMPOP42166 694 aaKnown RBP6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 FAM98CQ17RN3 349 aaKnown RBP6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 MTHFSDQ2M296 383 aaKnown RBP6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 AKAP4Q5JQC9 854 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 POTEAQ6S8J7 498 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 CCDC146Q8IYE0 955 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 PLA2G2EQ9NZK7 142 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 RBM27Q9P2N5 1060 aaKnown RBP6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 RABGEF1Q9UJ41 708 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 BCL9O00512 1426 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 TNS2Q63HR2 1409 aa6.57□□□□□ -1.36
SPARCL1-209ENST00000541496 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 PLCH1Q4KWH8 1693 aa6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 FAM208AQ9UK61 1670 aaKnown RBP6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 CYP27B1O15528 508 aa6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 PHKG2P15735 406 aa6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 COL9A1P20849 921 aa6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 MLLT3P42568 568 aaPredicted RBP6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 LMOD3Q0VAK6 560 aa6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 DDB1Q16531 1140 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms