RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ADGRG1Q9Y653 693 aa6.83□□□□□ -1.32
SNHG1-214ENST00000540865 IFT172Q9UG01 1749 aa6.83□□□□□ -1.32
SNHG1-214ENST00000540865 ATP7BP35670 1465 aa6.83□□□□□ -1.32
SNHG1-214ENST00000540865 BCL9O00512 1426 aa6.83□□□□□ -1.32
SNHG1-214ENST00000540865 USP19O94966 1318 aa6.82□□□□□ -1.32
SNHG1-214ENST00000540865 GPR162Q16538 588 aa6.82□□□□□ -1.32
SNHG1-214ENST00000540865 TXNRD1Q16881 649 aa6.82□□□□□ -1.32
SNHG1-214ENST00000540865 NUTM2GQ5VZR2 741 aa6.82□□□□□ -1.32
SNHG1-214ENST00000540865 NUDT18Q6ZVK8 323 aa6.82□□□□□ -1.32
SNHG1-214ENST00000540865 PTF1AQ7RTS3 328 aa6.82□□□□□ -1.32
SNHG1-214ENST00000540865 NUDT16Q96DE0 195 aaKnown RBP6.82□□□□□ -1.32
SNHG1-214ENST00000540865 ZFRQ96KR1 1074 aaKnown RBP6.82□□□□□ -1.32
SNHG1-214ENST00000540865 MPHOSPH9Q99550 1183 aa6.82□□□□□ -1.32
SNHG1-214ENST00000540865 SEPT9Q9UHD8 586 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-214ENST00000540865 PNMA3Q9UL41 463 aa6.82□□□□□ -1.32
SNHG1-214ENST00000540865 GCP02774 474 aa6.81□□□□□ -1.32
SNHG1-214ENST00000540865 NYAP1Q6ZVC0 841 aa6.81□□□□□ -1.32
SNHG1-214ENST00000540865 PACS2Q86VP3 889 aa6.81□□□□□ -1.32
SNHG1-214ENST00000540865 ABTB2Q8N961 1025 aa6.81□□□□□ -1.32
SNHG1-214ENST00000540865 TATDN2Q93075 761 aa6.81□□□□□ -1.32
SNHG1-214ENST00000540865 AK7Q96M32 723 aa6.81□□□□□ -1.32
SNHG1-214ENST00000540865 CDCA7Q9BWT1 371 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-214ENST00000540865 RGPD8O14715 1765 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-214ENST00000540865 CASZ1Q86V15 1759 aa6.81□□□□□ -1.32
SNHG1-214ENST00000540865 CRB1P82279 1406 aa6.81□□□□□ -1.32
SNHG1-214ENST00000540865 AATKQ6ZMQ8 1374 aa6.81□□□□□ -1.32
SNHG1-214ENST00000540865 COL5A2P05997 1499 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-214ENST00000540865 PLEKHG3A1L390 1219 aa6.8□□□□□ -1.32
SNHG1-214ENST00000540865 TRIM66O15016 1216 aa6.8□□□□□ -1.32
SNHG1-214ENST00000540865 LAPTM4AQ15012 233 aa6.8□□□□□ -1.32
SNHG1-214ENST00000540865 METTL3Q86U44 580 aaKnown RBP6.8□□□□□ -1.32
SNHG1-214ENST00000540865 LAPTM4BQ86VI4 370 aa6.8□□□□□ -1.32
SNHG1-214ENST00000540865 NLRP13Q86W25 1043 aa6.8□□□□□ -1.32
SNHG1-214ENST00000540865 MARCH10Q8NA82 808 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-214ENST00000540865 CRYBG1Q9Y4K1 1723 aa6.8□□□□□ -1.32
SNHG1-214ENST00000540865 MYOM1P52179 1685 aa6.8□□□□□ -1.32
SNHG1-214ENST00000540865 POLR3AO14802 1390 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-214ENST00000540865 RGPD3A6NKT7 1758 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-214ENST00000540865 RGPD4Q7Z3J3 1758 aa6.8□□□□□ -1.32
SNHG1-214ENST00000540865 ACEP12821 1306 aa6.79□□□□□ -1.32
SNHG1-214ENST00000540865 NBPF26B4DH59 902 aa6.79□□□□□ -1.32
SNHG1-214ENST00000540865 GFRA3O60609 400 aa6.79□□□□□ -1.32
SNHG1-214ENST00000540865 TRAF7Q6Q0C0 670 aa6.79□□□□□ -1.32
SNHG1-214ENST00000540865 PXYLP1Q8TE99 480 aa6.79□□□□□ -1.32
SNHG1-214ENST00000540865 EYA1Q99502 592 aa6.79□□□□□ -1.32
SNHG1-214ENST00000540865 ADGRB1O14514 1584 aa6.78□□□□□ -1.32
SNHG1-214ENST00000540865 GRIN3BO60391 1043 aa6.78□□□□□ -1.32
SNHG1-214ENST00000540865 TOM1L2Q6ZVM7 507 aa6.78□□□□□ -1.32
SNHG1-214ENST00000540865 PPARGC1BQ86YN6 1023 aaKnown RBP6.78□□□□□ -1.32
SNHG1-214ENST00000540865 SLC16A10Q8TF71 515 aa6.78□□□□□ -1.32
SNHG1-214ENST00000540865 CDK19Q9BWU1 502 aa6.78□□□□□ -1.32
SNHG1-214ENST00000540865 PEAK1Q9H792 1746 aa6.78□□□□□ -1.32
SNHG1-214ENST00000540865 LMO7Q8WWI1 1683 aa6.77□□□□□ -1.32
SNHG1-214ENST00000540865 PHRF1Q9P1Y6 1649 aaKnown RBP6.77□□□□□ -1.33
SNHG1-214ENST00000540865 PARP4Q9UKK3 1724 aaKnown RBP6.77□□□□□ -1.33
SNHG1-214ENST00000540865 EXOC5O00471 708 aa6.77□□□□□ -1.33
SNHG1-214ENST00000540865 OATP04181 439 aa6.77□□□□□ -1.33
SNHG1-214ENST00000540865 HSPA6P17066 643 aa6.77□□□□□ -1.33
SNHG1-214ENST00000540865 POLD1P28340 1107 aa6.77□□□□□ -1.33
SNHG1-214ENST00000540865 RBM46Q8TBY0 533 aaKnown RBP6.77□□□□□ -1.33
SNHG1-214ENST00000540865 HPS5Q9UPZ3 1129 aa6.77□□□□□ -1.33
SNHG1-214ENST00000540865 BRD4O60885 1362 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-214ENST00000540865 WDR17Q8IZU2 1322 aa6.76□□□□□ -1.33
SNHG1-214ENST00000540865 RCCD1A6NED2 376 aa6.76□□□□□ -1.33
SNHG1-214ENST00000540865 MDM2Q00987 491 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-214ENST00000540865 PDE4DQ08499 809 aa6.76□□□□□ -1.33
SNHG1-214ENST00000540865 REPIN1Q9BWE0 567 aaKnown RBP6.76□□□□□ -1.33
SNHG1-214ENST00000540865 CARD10Q9BWT7 1032 aa6.76□□□□□ -1.33
SNHG1-214ENST00000540865 ZBTB7CA1YPR0 619 aa6.75□□□□□ -1.33
SNHG1-214ENST00000540865 ZNF827Q17R98 1081 aa6.75□□□□□ -1.33
SNHG1-214ENST00000540865 GPBP1L1Q9HC44 474 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-214ENST00000540865 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-214ENST00000540865 TSR3Q9UJK0 312 aaKnown RBP6.75□□□□□ -1.33
SNHG1-214ENST00000540865 CHD4Q14839 1912 aa6.75□□□□□ -1.33
SNHG1-214ENST00000540865 BRPF1P55201 1214 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-214ENST00000540865 TTLL12Q14166 644 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-214ENST00000540865 NLGN2Q8NFZ4 835 aa6.74□□□□□ -1.33
SNHG1-214ENST00000540865 LRCH3Q96II8 777 aa6.74□□□□□ -1.33
SNHG1-214ENST00000540865 PRKD2Q9BZL6 878 aa6.74□□□□□ -1.33
SNHG1-214ENST00000540865 ATP10DQ9P241 1426 aa6.74□□□□□ -1.33
SNHG1-214ENST00000540865 LRRC37A3O60309 1634 aa6.73□□□□□ -1.33
SNHG1-214ENST00000540865 NRG2O14511 850 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-214ENST00000540865 YBX3P16989 372 aaKnown RBP eCLIP6.73□□□□□ -1.33
SNHG1-214ENST00000540865 NEUROD2Q15784 382 aa6.73□□□□□ -1.33
SNHG1-214ENST00000540865 AMHR2Q16671 573 aa6.73□□□□□ -1.33
SNHG1-214ENST00000540865 SLC27A3Q5K4L6 730 aa6.73□□□□□ -1.33
SNHG1-214ENST00000540865 ARHGEF25Q86VW2 580 aa6.73□□□□□ -1.33
SNHG1-214ENST00000540865 PARP9Q8IXQ6 854 aa6.73□□□□□ -1.33
SNHG1-214ENST00000540865 LRRC4BQ9NT99 713 aa6.73□□□□□ -1.33
SNHG1-214ENST00000540865 SHANK3Q9BYB0 1731 aa6.73□□□□□ -1.33
SNHG1-214ENST00000540865 CCDC7Q96M83 1385 aa6.72□□□□□ -1.33
SNHG1-214ENST00000540865 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.72□□□□□ -1.33
SNHG1-214ENST00000540865 CSB-PGBD3P0DP91 1061 aa6.72□□□□□ -1.33
SNHG1-214ENST00000540865 DNAJB2P25686 324 aa6.72□□□□□ -1.33
SNHG1-214ENST00000540865 SWT1Q5T5J6 900 aaKnown RBP6.72□□□□□ -1.33
SNHG1-214ENST00000540865 SAMD7Q7Z3H4 446 aa6.72□□□□□ -1.33
SNHG1-214ENST00000540865 KCNH5Q8NCM2 988 aa6.72□□□□□ -1.33
SNHG1-214ENST00000540865 DCAF11Q8TEB1 546 aa6.72□□□□□ -1.33
SNHG1-214ENST00000540865 ACSBG1Q96GR2 724 aa6.72□□□□□ -1.33
SNHG1-214ENST00000540865 USP6P35125 1406 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms