RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TRIM35Q9UPQ4 493 aa24.11■■□□□ 1.45
SNRPA1-203ENST00000540017 C4AP0C0L4 1744 aa24.1■■□□□ 1.45
SNRPA1-203ENST00000540017 PNISRQ8TF01 805 aaKnown RBP24.1■■□□□ 1.45
SNRPA1-203ENST00000540017 MRS2Q9HD23 443 aa24.1■■□□□ 1.45
SNRPA1-203ENST00000540017 SOS1Q07889 1333 aaPredicted RBP24.1■■□□□ 1.45
SNRPA1-203ENST00000540017 KDM3BQ7LBC6 1761 aa24.09■■□□□ 1.45
SNRPA1-203ENST00000540017 STARD3NLO95772 234 aa24.08■■□□□ 1.45
SNRPA1-203ENST00000540017 RFC4P35249 363 aa24.08■■□□□ 1.45
SNRPA1-203ENST00000540017 SYT17Q9BSW7 474 aa24.08■■□□□ 1.45
SNRPA1-203ENST00000540017 SRP68Q9UHB9 627 aaKnown RBP24.08■■□□□ 1.45
SNRPA1-203ENST00000540017 USP16Q9Y5T5 823 aa24.08■■□□□ 1.45
SNRPA1-203ENST00000540017 APAF1O14727 1248 aa24.07■■□□□ 1.44
SNRPA1-203ENST00000540017 GYS1P13807 737 aa24.07■■□□□ 1.44
SNRPA1-203ENST00000540017 CANXP27824 592 aaKnown RBP24.07■■□□□ 1.44
SNRPA1-203ENST00000540017 LMOD3Q0VAK6 560 aa24.07■■□□□ 1.44
SNRPA1-203ENST00000540017 TEX13AQ9BXU3 409 aaPredicted RBP24.07■■□□□ 1.44
SNRPA1-203ENST00000540017 A1BGP04217 495 aa24.06■■□□□ 1.44
SNRPA1-203ENST00000540017 SNRPA1P09661 255 aaKnown RBP24.05■■□□□ 1.44
SNRPA1-203ENST00000540017 EIF4A1P60842 406 aaKnown RBP24.04■■□□□ 1.44
SNRPA1-203ENST00000540017 USP42Q9H9J4 1324 aaKnown RBP24.04■■□□□ 1.44
SNRPA1-203ENST00000540017 COL15A1P39059 1388 aa24.03■■□□□ 1.44
SNRPA1-203ENST00000540017 EIF5P55010 431 aaKnown RBP24.03■■□□□ 1.44
SNRPA1-203ENST00000540017 KLHL34Q8N239 644 aa24.03■■□□□ 1.44
SNRPA1-203ENST00000540017 PIP4K2AP48426 406 aaPredicted RBP24.02■■□□□ 1.44
SNRPA1-203ENST00000540017 TSPYL4Q9UJ04 414 aa24.02■■□□□ 1.44
SNRPA1-203ENST00000540017 SENP3-EIF4A1A0A087X0R7 540 aa24.01■■□□□ 1.43
SNRPA1-203ENST00000540017 MMP10P09238 476 aa24.01■■□□□ 1.43
SNRPA1-203ENST00000540017 FKBP8Q14318 412 aa24.01■■□□□ 1.43
SNRPA1-203ENST00000540017 NLGN1Q8N2Q7 840 aa24.01■■□□□ 1.43
SNRPA1-203ENST00000540017 GIGYF1O75420 1035 aaPredicted RBP24■■□□□ 1.43
SNRPA1-203ENST00000540017 USPL1Q5W0Q7 1092 aa24■■□□□ 1.43
SNRPA1-203ENST00000540017 NLGN2Q8NFZ4 835 aa23.99■■□□□ 1.43
SNRPA1-203ENST00000540017 NARFQ9UHQ1 456 aa23.99■■□□□ 1.43
SNRPA1-203ENST00000540017 CHL1O00533 1208 aa23.98■■□□□ 1.43
SNRPA1-203ENST00000540017 ZPR1O75312 459 aa23.98■■□□□ 1.43
SNRPA1-203ENST00000540017 IL6STP40189 918 aaPredicted RBP23.98■■□□□ 1.43
SNRPA1-203ENST00000540017 BCL2L12Q9HB09 334 aa23.98■■□□□ 1.43
SNRPA1-203ENST00000540017 BABAM1Q9NWV8 329 aa23.98■■□□□ 1.43
SNRPA1-203ENST00000540017 ZNF330Q9Y3S2 320 aaPredicted RBP23.98■■□□□ 1.43
SNRPA1-203ENST00000540017 NBPF26B4DH59 902 aa23.97■■□□□ 1.43
SNRPA1-203ENST00000540017 NBPF10Q6P3W6 841 aaKnown RBP23.97■■□□□ 1.43
SNRPA1-203ENST00000540017 NBPF15Q8N660 670 aa23.97■■□□□ 1.43
SNRPA1-203ENST00000540017 TBC1D2BQ9UPU7 963 aa23.96■■□□□ 1.43
SNRPA1-203ENST00000540017 LAS1LQ9Y4W2 734 aaKnown RBP23.96■■□□□ 1.43
SNRPA1-203ENST00000540017 LAMB4A4D0S4 1761 aa23.96■■□□□ 1.43
SNRPA1-203ENST00000540017 TM4SF1P30408 202 aa23.94■■□□□ 1.42
SNRPA1-203ENST00000540017 DDR1Q08345 913 aa23.94■■□□□ 1.42
SNRPA1-203ENST00000540017 A0A087WZG4 1122 aa23.93■■□□□ 1.42
SNRPA1-203ENST00000540017 KRT24Q2M2I5 525 aa23.93■■□□□ 1.42
SNRPA1-203ENST00000540017 FAM9BQ8IZU0 186 aa23.93■■□□□ 1.42
SNRPA1-203ENST00000540017 CD2APQ9Y5K6 639 aa23.93■■□□□ 1.42
SNRPA1-203ENST00000540017 CFAP44Q96MT7 982 aa23.92■■□□□ 1.42
SNRPA1-203ENST00000540017 ZNF853P0CG23 659 aa23.91■■□□□ 1.42
SNRPA1-203ENST00000540017 NFIXQ14938 502 aa23.91■■□□□ 1.42
SNRPA1-203ENST00000540017 PARP3Q9Y6F1 533 aa23.91■■□□□ 1.42
SNRPA1-203ENST00000540017 SCN7AQ01118 1682 aa23.9■■□□□ 1.42
SNRPA1-203ENST00000540017 POLRMTO00411 1230 aaKnown RBP23.9■■□□□ 1.42
SNRPA1-203ENST00000540017 CAMTA2O94983 1202 aa23.9■■□□□ 1.42
SNRPA1-203ENST00000540017 DZIP3Q86Y13 1208 aaKnown RBP23.9■■□□□ 1.42
SNRPA1-203ENST00000540017 MBIPQ9NS73 344 aa23.89■■□□□ 1.41
SNRPA1-203ENST00000540017 GOLGB1Q14789 3259 aaKnown RBP23.88■■□□□ 1.41
SNRPA1-203ENST00000540017 C10orf71Q711Q0 1435 aa23.87■■□□□ 1.41
SNRPA1-203ENST00000540017 EIF2S2P20042 333 aaKnown RBP23.87■■□□□ 1.41
SNRPA1-203ENST00000540017 CCDC27Q2M243 656 aa23.87■■□□□ 1.41
SNRPA1-203ENST00000540017 TBC1D9BQ66K14 1250 aa23.87■■□□□ 1.41
SNRPA1-203ENST00000540017 NPM2Q86SE8 214 aaKnown RBP23.87■■□□□ 1.41
SNRPA1-203ENST00000540017 WWC1Q8IX03 1113 aa23.87■■□□□ 1.41
SNRPA1-203ENST00000540017 IFT57Q9NWB7 429 aa23.87■■□□□ 1.41
SNRPA1-203ENST00000540017 KIF13BQ9NQT8 1826 aa23.87■■□□□ 1.41
SNRPA1-203ENST00000540017 BCORQ6W2J9 1755 aa23.86■■□□□ 1.41
SNRPA1-203ENST00000540017 BICDL1Q6ZP65 573 aa23.86■■□□□ 1.41
SNRPA1-203ENST00000540017 MYL6BP14649 208 aa23.85■■□□□ 1.41
SNRPA1-203ENST00000540017 GNAI1P63096 354 aa23.85■■□□□ 1.41
SNRPA1-203ENST00000540017 CALD1Q05682 793 aaKnown RBP23.85■■□□□ 1.41
SNRPA1-203ENST00000540017 PDIA6Q15084 440 aa23.85■■□□□ 1.41
SNRPA1-203ENST00000540017 NGEFQ8N5V2 710 aa23.85■■□□□ 1.41
SNRPA1-203ENST00000540017 NECTIN2Q92692 538 aa23.85■■□□□ 1.41
SNRPA1-203ENST00000540017 KIAA1551Q9HCM1 1747 aa23.84■■□□□ 1.41
SNRPA1-203ENST00000540017 SALL2Q9Y467 1007 aaPredicted RBP23.84■■□□□ 1.41
SNRPA1-203ENST00000540017 AFDNP55196 1824 aaKnown RBP23.83■■□□□ 1.41
SNRPA1-203ENST00000540017 PROSER3Q2NL68 480 aa23.83■■□□□ 1.41
SNRPA1-203ENST00000540017 NCBP3Q53F19 620 aaKnown RBP23.83■■□□□ 1.41
SNRPA1-203ENST00000540017 TTLL7Q6ZT98 887 aa23.83■■□□□ 1.41
SNRPA1-203ENST00000540017 LRP10Q7Z4F1 713 aa23.83■■□□□ 1.41
SNRPA1-203ENST00000540017 UTRNP46939 3433 aa23.83■■□□□ 1.41
SNRPA1-203ENST00000540017 PXDNLA1KZ92 1463 aa23.82■■□□□ 1.4
SNRPA1-203ENST00000540017 NRXN2Q9P2S2 1712 aa23.82■■□□□ 1.4
SNRPA1-203ENST00000540017 DCAF8L1A6NGE4 600 aa23.82■■□□□ 1.4
SNRPA1-203ENST00000540017 ANXA1P04083 346 aa23.82■■□□□ 1.4
SNRPA1-203ENST00000540017 SERPINB2P05120 415 aa23.82■■□□□ 1.4
SNRPA1-203ENST00000540017 YBX3P16989 372 aaKnown RBP eCLIP23.82■■□□□ 1.4
SNRPA1-203ENST00000540017 PELP1Q8IZL8 1130 aaKnown RBP23.82■■□□□ 1.4
SNRPA1-203ENST00000540017 WWC3Q9ULE0 1092 aa23.82■■□□□ 1.4
SNRPA1-203ENST00000540017 ERBB4Q15303 1308 aa23.82■■□□□ 1.4
SNRPA1-203ENST00000540017 HLFQ16534 295 aa23.81■■□□□ 1.4
SNRPA1-203ENST00000540017 GPR162Q16538 588 aa23.81■■□□□ 1.4
SNRPA1-203ENST00000540017 DUSP27Q5VZP5 1158 aa23.81■■□□□ 1.4
SNRPA1-203ENST00000540017 N4BP2Q86UW6 1770 aaPredicted RBP23.8■■□□□ 1.4
SNRPA1-203ENST00000540017 A0A0G2JLW4 131 aa23.8■■□□□ 1.4
SNRPA1-203ENST00000540017 TGFB2P61812 414 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms