RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 GNRH1P01148 92 aa6.08□□□□□ -1.44
AC055720.1-201ENST00000539552 MCCD1P59942 119 aaPredicted RBP6.08□□□□□ -1.44
AC055720.1-201ENST00000539552 SKIV2LQ15477 1246 aaKnown RBP6.08□□□□□ -1.44
AC055720.1-201ENST00000539552 ARTNQ5T4W7 220 aa6.08□□□□□ -1.44
AC055720.1-201ENST00000539552 CHSY3Q70JA7 882 aa6.08□□□□□ -1.44
AC055720.1-201ENST00000539552 CNKSR1Q969H4 720 aa6.08□□□□□ -1.44
AC055720.1-201ENST00000539552 DDRGK1Q96HY6 314 aa6.08□□□□□ -1.44
AC055720.1-201ENST00000539552 RAB6BQ9NRW1 208 aa6.08□□□□□ -1.44
AC055720.1-201ENST00000539552 PCDHB11Q9Y5F2 797 aa6.08□□□□□ -1.44
AC055720.1-201ENST00000539552 ZBBXA8MT70 800 aa6.07□□□□□ -1.44
AC055720.1-201ENST00000539552 EIF5BO60841 1220 aaKnown RBP6.07□□□□□ -1.44
AC055720.1-201ENST00000539552 MYCP01106 439 aaPredicted RBP6.07□□□□□ -1.44
AC055720.1-201ENST00000539552 ADH6P28332 368 aa6.07□□□□□ -1.44
AC055720.1-201ENST00000539552 EPS8L1Q8TE68 723 aa6.07□□□□□ -1.44
AC055720.1-201ENST00000539552 ESYT1Q9BSJ8 1104 aa6.07□□□□□ -1.44
AC055720.1-201ENST00000539552 USP17L8P0C7I0 530 aa6.06□□□□□ -1.44
AC055720.1-201ENST00000539552 ITGB7P26010 798 aa6.06□□□□□ -1.44
AC055720.1-201ENST00000539552 CTBSQ01459 385 aa6.06□□□□□ -1.44
AC055720.1-201ENST00000539552 CENPCQ03188 943 aa6.06□□□□□ -1.44
AC055720.1-201ENST00000539552 PLVAPQ9BX97 442 aa6.06□□□□□ -1.44
AC055720.1-201ENST00000539552 HOXB4P17483 251 aaPredicted RBP6.05□□□□□ -1.44
AC055720.1-201ENST00000539552 MSX1P28360 303 aa6.05□□□□□ -1.44
AC055720.1-201ENST00000539552 ESCO1Q5FWF5 840 aa6.05□□□□□ -1.44
AC055720.1-201ENST00000539552 NACC1Q96RE7 527 aa6.05□□□□□ -1.44
AC055720.1-201ENST00000539552 C2CD2LO14523 706 aa6.04□□□□□ -1.44
AC055720.1-201ENST00000539552 BNIP3LO60238 219 aa6.04□□□□□ -1.44
AC055720.1-201ENST00000539552 HMGB1P09429 215 aaKnown RBP6.04□□□□□ -1.44
AC055720.1-201ENST00000539552 ALAS2P22557 587 aa6.04□□□□□ -1.44
AC055720.1-201ENST00000539552 RSPO4Q2I0M5 234 aaPredicted RBP6.04□□□□□ -1.44
AC055720.1-201ENST00000539552 TBC1D9Q6ZT07 1266 aa6.04□□□□□ -1.44
AC055720.1-201ENST00000539552 PRR12Q9ULL5 1215 aa6.04□□□□□ -1.44
AC055720.1-201ENST00000539552 DYRK3O43781 588 aa6.03□□□□□ -1.44
AC055720.1-201ENST00000539552 THBS1P07996 1170 aa6.03□□□□□ -1.44
AC055720.1-201ENST00000539552 SH3D19Q5HYK7 790 aa6.03□□□□□ -1.44
AC055720.1-201ENST00000539552 OSBPL3Q9H4L5 887 aa6.03□□□□□ -1.44
AC055720.1-201ENST00000539552 HMX1Q9NP08 348 aaPredicted RBP6.03□□□□□ -1.44
AC055720.1-201ENST00000539552 PCDHGC4Q9Y5F7 938 aa6.03□□□□□ -1.44
AC055720.1-201ENST00000539552 APBB1O00213 710 aa6.02□□□□□ -1.45
AC055720.1-201ENST00000539552 SCTRP47872 440 aa6.02□□□□□ -1.45
AC055720.1-201ENST00000539552 C4orf17Q53FE4 359 aa6.02□□□□□ -1.45
AC055720.1-201ENST00000539552 KRTAP4-12Q9BQ66 201 aa6.02□□□□□ -1.45
AC055720.1-201ENST00000539552 GOLGA2P5Q9HBQ8 144 aa6.02□□□□□ -1.45
AC055720.1-201ENST00000539552 AVENQ9NQS1 362 aaPredicted RBP6.02□□□□□ -1.45
AC055720.1-201ENST00000539552 TPSG1Q9NRR2 321 aa6.02□□□□□ -1.45
AC055720.1-201ENST00000539552 GJA3Q9Y6H8 435 aa6.02□□□□□ -1.45
AC055720.1-201ENST00000539552 TRAK2O60296 914 aa6.01□□□□□ -1.45
AC055720.1-201ENST00000539552 IGSF3O75054 1194 aa6.01□□□□□ -1.45
AC055720.1-201ENST00000539552 PRSS36Q5K4E3 855 aa6.01□□□□□ -1.45
AC055720.1-201ENST00000539552 NKAPLQ5M9Q1 402 aa6.01□□□□□ -1.45
AC055720.1-201ENST00000539552 PROCA1Q8NCQ7 364 aaPredicted RBP6.01□□□□□ -1.45
AC055720.1-201ENST00000539552 RHBDD1Q8TEB9 315 aa6.01□□□□□ -1.45
AC055720.1-201ENST00000539552 CRISPLD1Q9H336 500 aa6.01□□□□□ -1.45
AC055720.1-201ENST00000539552 ATXN7O15265 892 aaPredicted RBP6□□□□□ -1.45
AC055720.1-201ENST00000539552 IL2RAP01589 272 aa6□□□□□ -1.45
AC055720.1-201ENST00000539552 TRIM28Q13263 835 aaKnown RBP6□□□□□ -1.45
AC055720.1-201ENST00000539552 LRP8Q14114 963 aa6□□□□□ -1.45
AC055720.1-201ENST00000539552 UBAP2LQ14157 1087 aaKnown RBP6□□□□□ -1.45
AC055720.1-201ENST00000539552 AIDAQ96BJ3 306 aa6□□□□□ -1.45
AC055720.1-201ENST00000539552 GNL3Q9BVP2 549 aaKnown RBP eCLIP6□□□□□ -1.45
AC055720.1-201ENST00000539552 ZCCHC2Q9C0B9 1178 aaKnown RBP6□□□□□ -1.45
AC055720.1-201ENST00000539552 DCDC2BA2VCK2 349 aa5.99□□□□□ -1.45
AC055720.1-201ENST00000539552 ARID3CA6NKF2 412 aa5.99□□□□□ -1.45
AC055720.1-201ENST00000539552 KHNYNO15037 678 aaKnown RBP5.99□□□□□ -1.45
AC055720.1-201ENST00000539552 COBLO75128 1261 aa5.99□□□□□ -1.45
AC055720.1-201ENST00000539552 FBXO45P0C2W1 286 aa5.99□□□□□ -1.45
AC055720.1-201ENST00000539552 PLA2G4AP47712 749 aa5.99□□□□□ -1.45
AC055720.1-201ENST00000539552 ARSJQ5FYB0 599 aaPredicted RBP5.99□□□□□ -1.45
AC055720.1-201ENST00000539552 NLRP8Q86W28 1048 aa5.99□□□□□ -1.45
AC055720.1-201ENST00000539552 C1orf216Q8TAB5 229 aa5.99□□□□□ -1.45
AC055720.1-201ENST00000539552 TRIM11Q96F44 468 aa5.99□□□□□ -1.45
AC055720.1-201ENST00000539552 NDFIP2Q9NV92 336 aa5.99□□□□□ -1.45
AC055720.1-201ENST00000539552 KIF13AQ9H1H9 1805 aa5.98□□□□□ -1.45
AC055720.1-201ENST00000539552 HSP90B1P14625 803 aaKnown RBP5.98□□□□□ -1.45
AC055720.1-201ENST00000539552 TLR1Q15399 786 aa5.98□□□□□ -1.45
AC055720.1-201ENST00000539552 XAGE2Q96GT9 111 aa5.98□□□□□ -1.45
AC055720.1-201ENST00000539552 PCMTD1Q96MG8 357 aaPredicted RBP5.98□□□□□ -1.45
AC055720.1-201ENST00000539552 FAM117AQ9C073 453 aa5.98□□□□□ -1.45
AC055720.1-201ENST00000539552 RAD21O60216 631 aa5.97□□□□□ -1.45
AC055720.1-201ENST00000539552 CD33P20138 364 aa5.97□□□□□ -1.45
AC055720.1-201ENST00000539552 CDK11BP21127 795 aaKnown RBP5.97□□□□□ -1.45
AC055720.1-201ENST00000539552 PCBP4P57723 403 aaKnown RBP5.97□□□□□ -1.45
AC055720.1-201ENST00000539552 NBPF1Q3BBV0 1214 aa5.97□□□□□ -1.45
AC055720.1-201ENST00000539552 FOXD4L6Q3SYB3 417 aaPredicted RBP5.97□□□□□ -1.45
AC055720.1-201ENST00000539552 FAM182BQ5T319 152 aa5.97□□□□□ -1.45
AC055720.1-201ENST00000539552 FOXD4L3Q6VB84 417 aaPredicted RBP5.97□□□□□ -1.45
AC055720.1-201ENST00000539552 FCHSD1Q86WN1 690 aa5.97□□□□□ -1.45
AC055720.1-201ENST00000539552 RGS22Q8NE09 1264 aa5.97□□□□□ -1.45
AC055720.1-201ENST00000539552 TRAIPQ9BWF2 469 aa5.97□□□□□ -1.45
AC055720.1-201ENST00000539552 CDK11AQ9UQ88 783 aaPredicted RBP5.97□□□□□ -1.45
AC055720.1-201ENST00000539552 WDR62O43379 1518 aa5.96□□□□□ -1.46
AC055720.1-201ENST00000539552 PAX4O43316 350 aa5.96□□□□□ -1.46
AC055720.1-201ENST00000539552 MAPTP10636 758 aaKnown RBP5.96□□□□□ -1.46
AC055720.1-201ENST00000539552 TATP17735 454 aaPredicted RBP5.96□□□□□ -1.46
AC055720.1-201ENST00000539552 NR1H3Q13133 447 aa5.96□□□□□ -1.46
AC055720.1-201ENST00000539552 ELOA3CA0A087WX78 387 aaPredicted RBP5.95□□□□□ -1.46
AC055720.1-201ENST00000539552 ELOA3DA6NLF2 546 aaPredicted RBP5.95□□□□□ -1.46
AC055720.1-201ENST00000539552 C9orf172C9J069 976 aa5.95□□□□□ -1.46
AC055720.1-201ENST00000539552 RFC5P40937 340 aa5.95□□□□□ -1.46
AC055720.1-201ENST00000539552 ELOA3BQ3SY89 546 aa5.95□□□□□ -1.46
AC055720.1-201ENST00000539552 TMEM259Q4ZIN3 620 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms