RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 POLD1P28340 1107 aa11.84□□□□□ -0.51
LRTOMT-216ENST00000539271 TRAPPC3LQ5T215 181 aa11.84□□□□□ -0.51
LRTOMT-216ENST00000539271 MSL1Q68DK7 614 aa11.84□□□□□ -0.51
LRTOMT-216ENST00000539271 ARXQ96QS3 562 aa11.84□□□□□ -0.51
LRTOMT-216ENST00000539271 THUMPD2Q9BTF0 503 aaKnown RBP11.84□□□□□ -0.51
LRTOMT-216ENST00000539271 CCDC87Q9NVE4 849 aa11.84□□□□□ -0.51
LRTOMT-216ENST00000539271 KDM3BQ7LBC6 1761 aa11.84□□□□□ -0.51
LRTOMT-216ENST00000539271 LMOD3Q0VAK6 560 aa11.83□□□□□ -0.52
LRTOMT-216ENST00000539271 ARHGEF1Q92888 912 aaKnown RBP11.83□□□□□ -0.52
LRTOMT-216ENST00000539271 TEX13AQ9BXU3 409 aaPredicted RBP11.83□□□□□ -0.52
LRTOMT-216ENST00000539271 RRP7AQ9Y3A4 280 aaKnown RBP11.83□□□□□ -0.52
LRTOMT-216ENST00000539271 SOS1Q07889 1333 aaPredicted RBP11.83□□□□□ -0.52
LRTOMT-216ENST00000539271 STARD3NLO95772 234 aa11.82□□□□□ -0.52
LRTOMT-216ENST00000539271 PNISRQ8TF01 805 aaKnown RBP11.82□□□□□ -0.52
LRTOMT-216ENST00000539271 MIS18AQ9NYP9 233 aa11.82□□□□□ -0.52
LRTOMT-216ENST00000539271 ZBTB1Q9Y2K1 713 aa11.82□□□□□ -0.52
LRTOMT-216ENST00000539271 RFC4P35249 363 aa11.81□□□□□ -0.52
LRTOMT-216ENST00000539271 FHDC1Q9C0D6 1143 aaPredicted RBP11.81□□□□□ -0.52
LRTOMT-216ENST00000539271 MRS2Q9HD23 443 aa11.81□□□□□ -0.52
LRTOMT-216ENST00000539271 TRIM35Q9UPQ4 493 aa11.81□□□□□ -0.52
LRTOMT-216ENST00000539271 UTRNP46939 3433 aa11.8□□□□□ -0.52
LRTOMT-216ENST00000539271 SNRPA1P09661 255 aaKnown RBP11.8□□□□□ -0.52
LRTOMT-216ENST00000539271 NEUROD2Q15784 382 aa11.8□□□□□ -0.52
LRTOMT-216ENST00000539271 SYT17Q9BSW7 474 aa11.8□□□□□ -0.52
LRTOMT-216ENST00000539271 USP42Q9H9J4 1324 aaKnown RBP11.8□□□□□ -0.52
LRTOMT-216ENST00000539271 COL15A1P39059 1388 aa11.79□□□□□ -0.52
LRTOMT-216ENST00000539271 PRAMEF22A3QJZ6 481 aa11.79□□□□□ -0.52
LRTOMT-216ENST00000539271 APAF1O14727 1248 aa11.79□□□□□ -0.52
LRTOMT-216ENST00000539271 GYS1P13807 737 aa11.79□□□□□ -0.52
LRTOMT-216ENST00000539271 CANXP27824 592 aaKnown RBP11.79□□□□□ -0.52
LRTOMT-216ENST00000539271 EIF5P55010 431 aaKnown RBP11.79□□□□□ -0.52
LRTOMT-216ENST00000539271 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
LRTOMT-216ENST00000539271 BABAM1Q9NWV8 329 aa11.79□□□□□ -0.52
LRTOMT-216ENST00000539271 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
LRTOMT-216ENST00000539271 USP16Q9Y5T5 823 aa11.79□□□□□ -0.52
LRTOMT-216ENST00000539271 LAMB4A4D0S4 1761 aa11.79□□□□□ -0.52
LRTOMT-216ENST00000539271 A1BGP04217 495 aa11.78□□□□□ -0.52
LRTOMT-216ENST00000539271 EIF4A1P60842 406 aaKnown RBP11.78□□□□□ -0.52
LRTOMT-216ENST00000539271 TSPYL4Q9UJ04 414 aa11.78□□□□□ -0.52
LRTOMT-216ENST00000539271 GIGYF1O75420 1035 aaPredicted RBP11.77□□□□□ -0.53
LRTOMT-216ENST00000539271 MMP10P09238 476 aa11.77□□□□□ -0.53
LRTOMT-216ENST00000539271 IL6STP40189 918 aaPredicted RBP11.77□□□□□ -0.53
LRTOMT-216ENST00000539271 NARFQ9UHQ1 456 aa11.77□□□□□ -0.53
LRTOMT-216ENST00000539271 A0A087WZG4 1122 aa11.76□□□□□ -0.53
LRTOMT-216ENST00000539271 CHL1O00533 1208 aa11.76□□□□□ -0.53
LRTOMT-216ENST00000539271 ZPR1O75312 459 aa11.76□□□□□ -0.53
LRTOMT-216ENST00000539271 FKBP8Q14318 412 aa11.76□□□□□ -0.53
LRTOMT-216ENST00000539271 USPL1Q5W0Q7 1092 aa11.76□□□□□ -0.53
LRTOMT-216ENST00000539271 KLHL34Q8N239 644 aa11.75□□□□□ -0.53
LRTOMT-216ENST00000539271 BCL2L12Q9HB09 334 aa11.75□□□□□ -0.53
LRTOMT-216ENST00000539271 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
LRTOMT-216ENST00000539271 SCN7AQ01118 1682 aa11.75□□□□□ -0.53
LRTOMT-216ENST00000539271 KIF13BQ9NQT8 1826 aa11.74□□□□□ -0.53
LRTOMT-216ENST00000539271 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
LRTOMT-216ENST00000539271 PIP4K2AP48426 406 aaPredicted RBP11.74□□□□□ -0.53
LRTOMT-216ENST00000539271 NBPF10Q6P3W6 841 aaKnown RBP11.74□□□□□ -0.53
LRTOMT-216ENST00000539271 NBPF15Q8N660 670 aa11.74□□□□□ -0.53
LRTOMT-216ENST00000539271 NLGN2Q8NFZ4 835 aa11.74□□□□□ -0.53
LRTOMT-216ENST00000539271 ZNF330Q9Y3S2 320 aaPredicted RBP11.74□□□□□ -0.53
LRTOMT-216ENST00000539271 ZNF853P0CG23 659 aa11.73□□□□□ -0.53
LRTOMT-216ENST00000539271 TM4SF1P30408 202 aa11.73□□□□□ -0.53
LRTOMT-216ENST00000539271 CALD1Q05682 793 aaKnown RBP11.73□□□□□ -0.53
LRTOMT-216ENST00000539271 DDR1Q08345 913 aa11.73□□□□□ -0.53
LRTOMT-216ENST00000539271 BCORQ6W2J9 1755 aa11.73□□□□□ -0.53
LRTOMT-216ENST00000539271 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
LRTOMT-216ENST00000539271 TBC1D2BQ9UPU7 963 aa11.73□□□□□ -0.53
LRTOMT-216ENST00000539271 LAS1LQ9Y4W2 734 aaKnown RBP11.73□□□□□ -0.53
LRTOMT-216ENST00000539271 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
LRTOMT-216ENST00000539271 AFDNP55196 1824 aaKnown RBP11.72□□□□□ -0.53
LRTOMT-216ENST00000539271 C10orf71Q711Q0 1435 aa11.72□□□□□ -0.53
LRTOMT-216ENST00000539271 POLRMTO00411 1230 aaKnown RBP11.72□□□□□ -0.53
LRTOMT-216ENST00000539271 CAMTA2O94983 1202 aa11.72□□□□□ -0.53
LRTOMT-216ENST00000539271 NFIXQ14938 502 aa11.72□□□□□ -0.53
LRTOMT-216ENST00000539271 CCDC27Q2M243 656 aa11.72□□□□□ -0.53
LRTOMT-216ENST00000539271 NPM2Q86SE8 214 aaKnown RBP11.72□□□□□ -0.53
LRTOMT-216ENST00000539271 IFT57Q9NWB7 429 aa11.72□□□□□ -0.53
LRTOMT-216ENST00000539271 ERBB4Q15303 1308 aa11.71□□□□□ -0.53
LRTOMT-216ENST00000539271 DZIP3Q86Y13 1208 aaKnown RBP11.71□□□□□ -0.53
LRTOMT-216ENST00000539271 FAM9BQ8IZU0 186 aa11.71□□□□□ -0.53
LRTOMT-216ENST00000539271 MBIPQ9NS73 344 aa11.71□□□□□ -0.53
LRTOMT-216ENST00000539271 KIAA1551Q9HCM1 1747 aa11.71□□□□□ -0.54
LRTOMT-216ENST00000539271 NRXN2Q9P2S2 1712 aa11.71□□□□□ -0.54
LRTOMT-216ENST00000539271 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
LRTOMT-216ENST00000539271 GNAI1P63096 354 aa11.7□□□□□ -0.54
LRTOMT-216ENST00000539271 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
LRTOMT-216ENST00000539271 WWC1Q8IX03 1113 aa11.7□□□□□ -0.54
LRTOMT-216ENST00000539271 RGL2O15211 777 aa11.69□□□□□ -0.54
LRTOMT-216ENST00000539271 HOXB7P09629 217 aa11.69□□□□□ -0.54
LRTOMT-216ENST00000539271 EIF2S2P20042 333 aaKnown RBP11.69□□□□□ -0.54
LRTOMT-216ENST00000539271 TBC1D9BQ66K14 1250 aa11.69□□□□□ -0.54
LRTOMT-216ENST00000539271 CLEC4GQ6UXB4 293 aa11.69□□□□□ -0.54
LRTOMT-216ENST00000539271 N4BP2Q86UW6 1770 aaPredicted RBP11.69□□□□□ -0.54
LRTOMT-216ENST00000539271 PXDNLA1KZ92 1463 aa11.69□□□□□ -0.54
LRTOMT-216ENST00000539271 GOLGB1Q14789 3259 aaKnown RBP11.68□□□□□ -0.54
LRTOMT-216ENST00000539271 NUP98P52948 1817 aa11.68□□□□□ -0.54
LRTOMT-216ENST00000539271 CCER2I3L3R5 266 aa11.68□□□□□ -0.54
LRTOMT-216ENST00000539271 TGFB2P61812 414 aa11.68□□□□□ -0.54
LRTOMT-216ENST00000539271 PDIA6Q15084 440 aa11.68□□□□□ -0.54
LRTOMT-216ENST00000539271 BICDL1Q6ZP65 573 aa11.68□□□□□ -0.54
LRTOMT-216ENST00000539271 LRP10Q7Z4F1 713 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms