RNA–Protein interactions for RNA: ENST00000537113.5

LRRC43-202, Transcript of leucine rich repeat containing 43, humanhuman

TSL 3

Gene LRRC43, Length 669 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43-202ENST00000537113 MIS18AQ9NYP9 233 aa24.86■■□□□ 1.57
LRRC43-202ENST00000537113 USP42Q9H9J4 1324 aaKnown RBP24.86■■□□□ 1.57
LRRC43-202ENST00000537113 COL15A1P39059 1388 aa24.85■■□□□ 1.57
LRRC43-202ENST00000537113 STARD3NLO95772 234 aa24.85■■□□□ 1.57
LRRC43-202ENST00000537113 PRAMEF22A3QJZ6 481 aa24.84■■□□□ 1.57
LRRC43-202ENST00000537113 WDR43Q15061 677 aaKnown RBP eCLIP24.84■■□□□ 1.57
LRRC43-202ENST00000537113 TAF7Q15545 349 aaPredicted RBP24.84■■□□□ 1.57
LRRC43-202ENST00000537113 CD2APQ9Y5K6 639 aa24.84■■□□□ 1.57
LRRC43-202ENST00000537113 KDM3BQ7LBC6 1761 aa24.84■■□□□ 1.57
LRRC43-202ENST00000537113 FKBP8Q14318 412 aa24.83■■□□□ 1.57
LRRC43-202ENST00000537113 PELP1Q8IZL8 1130 aaKnown RBP24.83■■□□□ 1.57
LRRC43-202ENST00000537113 TEX13AQ9BXU3 409 aaPredicted RBP24.83■■□□□ 1.57
LRRC43-202ENST00000537113 ADAMTS8Q9UP79 889 aa24.83■■□□□ 1.57
LRRC43-202ENST00000537113 RIPK4P57078 832 aa24.82■■□□□ 1.56
LRRC43-202ENST00000537113 USPL1Q5W0Q7 1092 aa24.82■■□□□ 1.56
LRRC43-202ENST00000537113 A1BGP04217 495 aa24.81■■□□□ 1.56
LRRC43-202ENST00000537113 GPR162Q16538 588 aa24.81■■□□□ 1.56
LRRC43-202ENST00000537113 RRP7AQ9Y3A4 280 aaKnown RBP24.81■■□□□ 1.56
LRRC43-202ENST00000537113 KIF13BQ9NQT8 1826 aa24.8■■□□□ 1.56
LRRC43-202ENST00000537113 ZPR1O75312 459 aa24.8■■□□□ 1.56
LRRC43-202ENST00000537113 TMPOP42166 694 aaKnown RBP24.8■■□□□ 1.56
LRRC43-202ENST00000537113 USP16Q9Y5T5 823 aa24.8■■□□□ 1.56
LRRC43-202ENST00000537113 EIF5P55010 431 aaKnown RBP24.79■■□□□ 1.56
LRRC43-202ENST00000537113 NARFQ9UHQ1 456 aa24.79■■□□□ 1.56
LRRC43-202ENST00000537113 NEUROD2Q15784 382 aa24.78■■□□□ 1.56
LRRC43-202ENST00000537113 RUNDC1Q96C34 613 aa24.78■■□□□ 1.56
LRRC43-202ENST00000537113 ZNF330Q9Y3S2 320 aaPredicted RBP24.78■■□□□ 1.56
LRRC43-202ENST00000537113 PARP3Q9Y6F1 533 aa24.78■■□□□ 1.56
LRRC43-202ENST00000537113 SNRPA1P09661 255 aaKnown RBP24.77■■□□□ 1.56
LRRC43-202ENST00000537113 PIP4K2AP48426 406 aaPredicted RBP24.77■■□□□ 1.56
LRRC43-202ENST00000537113 DDR1Q08345 913 aa24.77■■□□□ 1.56
LRRC43-202ENST00000537113 CCDC184Q52MB2 194 aa24.77■■□□□ 1.56
LRRC43-202ENST00000537113 KIAA1551Q9HCM1 1747 aa24.77■■□□□ 1.56
LRRC43-202ENST00000537113 N4BP2Q86UW6 1770 aaPredicted RBP24.77■■□□□ 1.56
LRRC43-202ENST00000537113 CHD4Q14839 1912 aa24.76■■□□□ 1.55
LRRC43-202ENST00000537113 LAMB4A4D0S4 1761 aa24.76■■□□□ 1.55
LRRC43-202ENST00000537113 YBX3P16989 372 aaKnown RBP eCLIP24.76■■□□□ 1.55
LRRC43-202ENST00000537113 PNISRQ8TF01 805 aaKnown RBP24.76■■□□□ 1.55
LRRC43-202ENST00000537113 BCL2L12Q9HB09 334 aa24.76■■□□□ 1.55
LRRC43-202ENST00000537113 WWC3Q9ULE0 1092 aa24.76■■□□□ 1.55
LRRC43-202ENST00000537113 C10orf71Q711Q0 1435 aa24.75■■□□□ 1.55
LRRC43-202ENST00000537113 YY1P25490 414 aa24.74■■□□□ 1.55
LRRC43-202ENST00000537113 TM4SF1P30408 202 aa24.74■■□□□ 1.55
LRRC43-202ENST00000537113 IL6STP40189 918 aaPredicted RBP24.74■■□□□ 1.55
LRRC43-202ENST00000537113 SCN7AQ01118 1682 aa24.74■■□□□ 1.55
LRRC43-202ENST00000537113 AFDNP55196 1824 aaKnown RBP24.74■■□□□ 1.55
LRRC43-202ENST00000537113 A0A087WZG4 1122 aa24.73■■□□□ 1.55
LRRC43-202ENST00000537113 TBC1D2BQ9UPU7 963 aa24.73■■□□□ 1.55
LRRC43-202ENST00000537113 POLRMTO00411 1230 aaKnown RBP24.72■■□□□ 1.55
LRRC43-202ENST00000537113 EIF4A1P60842 406 aaKnown RBP24.72■■□□□ 1.55
LRRC43-202ENST00000537113 LMOD3Q0VAK6 560 aa24.72■■□□□ 1.55
LRRC43-202ENST00000537113 NFIXQ14938 502 aa24.72■■□□□ 1.55
LRRC43-202ENST00000537113 PXDNLA1KZ92 1463 aa24.71■■□□□ 1.55
LRRC43-202ENST00000537113 BCORQ6W2J9 1755 aa24.7■■□□□ 1.55
LRRC43-202ENST00000537113 TSPYL4Q9UJ04 414 aa24.7■■□□□ 1.54
LRRC43-202ENST00000537113 TRIM35Q9UPQ4 493 aa24.7■■□□□ 1.54
LRRC43-202ENST00000537113 NBPF26B4DH59 902 aa24.69■■□□□ 1.54
LRRC43-202ENST00000537113 GIGYF1O75420 1035 aaPredicted RBP24.69■■□□□ 1.54
LRRC43-202ENST00000537113 NBPF10Q6P3W6 841 aaKnown RBP24.69■■□□□ 1.54
LRRC43-202ENST00000537113 NBPF15Q8N660 670 aa24.69■■□□□ 1.54
LRRC43-202ENST00000537113 UTRNP46939 3433 aa24.68■■□□□ 1.54
LRRC43-202ENST00000537113 GOLGB1Q14789 3259 aaKnown RBP24.68■■□□□ 1.54
LRRC43-202ENST00000537113 ANP32CO43423 234 aa24.68■■□□□ 1.54
LRRC43-202ENST00000537113 BICDL1Q6ZP65 573 aa24.68■■□□□ 1.54
LRRC43-202ENST00000537113 NPM2Q86SE8 214 aaKnown RBP24.68■■□□□ 1.54
LRRC43-202ENST00000537113 NRXN2Q9P2S2 1712 aa24.68■■□□□ 1.54
LRRC43-202ENST00000537113 A0A0G2JLW4 131 aa24.67■■□□□ 1.54
LRRC43-202ENST00000537113 CAMTA2O94983 1202 aa24.66■■□□□ 1.54
LRRC43-202ENST00000537113 DPEP1P16444 411 aa24.66■■□□□ 1.54
LRRC43-202ENST00000537113 TGFB2P61812 414 aa24.66■■□□□ 1.54
LRRC43-202ENST00000537113 TBC1D9BQ66K14 1250 aa24.66■■□□□ 1.54
LRRC43-202ENST00000537113 DZIP3Q86Y13 1208 aaKnown RBP24.66■■□□□ 1.54
LRRC43-202ENST00000537113 BRCA1P38398 1863 aaKnown RBP24.66■■□□□ 1.54
LRRC43-202ENST00000537113 APAF1O14727 1248 aa24.65■■□□□ 1.54
LRRC43-202ENST00000537113 GRIN3BO60391 1043 aa24.64■■□□□ 1.54
LRRC43-202ENST00000537113 SERPINB2P05120 415 aa24.64■■□□□ 1.54
LRRC43-202ENST00000537113 LAS1LQ9Y4W2 734 aaKnown RBP24.63■■□□□ 1.53
LRRC43-202ENST00000537113 MRS2Q9HD23 443 aa24.62■■□□□ 1.53
LRRC43-202ENST00000537113 BABAM1Q9NWV8 329 aa24.62■■□□□ 1.53
LRRC43-202ENST00000537113 CARMIL3Q8ND23 1372 aa24.6■■□□□ 1.53
LRRC43-202ENST00000537113 KCNA3P22001 575 aa24.6■■□□□ 1.53
LRRC43-202ENST00000537113 CHRNA5P30532 468 aa24.6■■□□□ 1.53
LRRC43-202ENST00000537113 NGEFQ8N5V2 710 aa24.6■■□□□ 1.53
LRRC43-202ENST00000537113 SENP3-EIF4A1A0A087X0R7 540 aa24.59■■□□□ 1.53
LRRC43-202ENST00000537113 CHL1O00533 1208 aa24.59■■□□□ 1.53
LRRC43-202ENST00000537113 BCS1LQ9Y276 419 aa24.59■■□□□ 1.53
LRRC43-202ENST00000537113 ANKRD31Q8N7Z5 1873 aa24.58■■□□□ 1.53
LRRC43-202ENST00000537113 KRT24Q2M2I5 525 aa24.58■■□□□ 1.53
LRRC43-202ENST00000537113 MYL6BP14649 208 aa24.57■■□□□ 1.52
LRRC43-202ENST00000537113 EIF2S2P20042 333 aaKnown RBP24.57■■□□□ 1.52
LRRC43-202ENST00000537113 CCDC24Q8N4L8 307 aa24.57■■□□□ 1.52
LRRC43-202ENST00000537113 SETDB2Q96T68 719 aa24.56■■□□□ 1.52
LRRC43-202ENST00000537113 NUP98P52948 1817 aa24.56■■□□□ 1.52
LRRC43-202ENST00000537113 TTLL7Q6ZT98 887 aa24.55■■□□□ 1.52
LRRC43-202ENST00000537113 NECTIN2Q92692 538 aa24.55■■□□□ 1.52
LRRC43-202ENST00000537113 ARFGEF1Q9Y6D6 1849 aa24.55■■□□□ 1.52
LRRC43-202ENST00000537113 DLEC1Q9Y238 1755 aa24.54■■□□□ 1.52
LRRC43-202ENST00000537113 HLFQ16534 295 aa24.54■■□□□ 1.52
LRRC43-202ENST00000537113 PRR5LQ6MZQ0 368 aa24.54■■□□□ 1.52
LRRC43-202ENST00000537113 CLEC4GQ6UXB4 293 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms