RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 CEP89Q96ST8 783 aa12.06□□□□□ -0.48
RFX4-204ENST00000536688 SMARCA5O60264 1052 aaPredicted RBP12.05□□□□□ -0.48
RFX4-204ENST00000536688 ZNF75DP51815 510 aa12.05□□□□□ -0.48
RFX4-204ENST00000536688 PPM1EQ8WY54 764 aa12.05□□□□□ -0.48
RFX4-204ENST00000536688 GTF3C6Q969F1 213 aa12.05□□□□□ -0.48
RFX4-204ENST00000536688 EPB41L2O43491 1005 aaKnown RBP12.05□□□□□ -0.48
RFX4-204ENST00000536688 CPP00450 1065 aa12.05□□□□□ -0.48
RFX4-204ENST00000536688 HSP90AB3PQ58FF7 597 aa12.05□□□□□ -0.48
RFX4-204ENST00000536688 TMCO3Q6UWJ1 677 aa12.05□□□□□ -0.48
RFX4-204ENST00000536688 TSPOAP1O95153 1857 aa12.04□□□□□ -0.48
RFX4-204ENST00000536688 NEK4P51957 841 aa12.04□□□□□ -0.48
RFX4-204ENST00000536688 LRMPQ12912 555 aa12.04□□□□□ -0.48
RFX4-204ENST00000536688 NBPF20Q3BBV1 942 aa12.04□□□□□ -0.48
RFX4-204ENST00000536688 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.04□□□□□ -0.48
RFX4-204ENST00000536688 TDRD7Q8NHU6 1098 aaKnown RBP12.04□□□□□ -0.48
RFX4-204ENST00000536688 CARD14Q9BXL6 1004 aa12.04□□□□□ -0.48
RFX4-204ENST00000536688 SPAG9O60271 1321 aaKnown RBP12.04□□□□□ -0.48
RFX4-204ENST00000536688 TRAPPC8Q9Y2L5 1435 aa12.04□□□□□ -0.48
RFX4-204ENST00000536688 TRDNQ13061 729 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 TSGA10IPQ3SY00 556 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 FOXD4L5Q5VV16 416 aaPredicted RBP12.03□□□□□ -0.48
RFX4-204ENST00000536688 EGFL6Q8IUX8 553 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 CNKSR2Q8WXI2 1034 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 FOXD4L4Q8WXT5 416 aaPredicted RBP12.03□□□□□ -0.48
RFX4-204ENST00000536688 SMARCE1Q969G3 411 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 TACO1Q9BSH4 297 aaKnown RBP12.03□□□□□ -0.48
RFX4-204ENST00000536688 CXorf56Q9H5V9 222 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 DCTPP1Q9H773 170 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 LCMT1Q9UIC8 334 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 ERVK-7P63135 1459 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 SBNO2Q9Y2G9 1366 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 MCCP23508 829 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 ACTN2P35609 894 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 GYS2P54840 703 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
RFX4-204ENST00000536688 MLECQ14165 292 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 CCDC93Q567U6 631 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 MCTP2Q6DN12 878 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 SRCIN1Q9C0H9 1055 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 SSH2Q76I76 1423 aa12.03□□□□□ -0.48
RFX4-204ENST00000536688 CCDC196A0A1B0GTZ2 297 aa12.02□□□□□ -0.48
RFX4-204ENST00000536688 ZSCAN22P10073 491 aaPredicted RBP12.02□□□□□ -0.48
RFX4-204ENST00000536688 GIMAP6Q6P9H5 292 aa12.02□□□□□ -0.48
RFX4-204ENST00000536688 SIRT2Q8IXJ6 389 aa12.02□□□□□ -0.48
RFX4-204ENST00000536688 DRC7Q8IY82 874 aa12.02□□□□□ -0.48
RFX4-204ENST00000536688 CACTINQ8WUQ7 758 aaKnown RBP12.02□□□□□ -0.48
RFX4-204ENST00000536688 ZNF592Q92610 1267 aa12.02□□□□□ -0.48
RFX4-204ENST00000536688 SRRTQ9BXP5 876 aaKnown RBP12.02□□□□□ -0.48
RFX4-204ENST00000536688 SARM1Q6SZW1 724 aa12.02□□□□□ -0.49
RFX4-204ENST00000536688 LRRC8AQ8IWT6 810 aa12.02□□□□□ -0.49
RFX4-204ENST00000536688 TMX1Q9H3N1 280 aa12.02□□□□□ -0.49
RFX4-204ENST00000536688 GDPD2Q9HCC8 539 aa12.02□□□□□ -0.49
RFX4-204ENST00000536688 RAI14Q9P0K7 980 aa12.02□□□□□ -0.49
RFX4-204ENST00000536688 ABCA6Q8N139 1617 aa12.01□□□□□ -0.49
RFX4-204ENST00000536688 SDSP20132 328 aa12.01□□□□□ -0.49
RFX4-204ENST00000536688 KCNJ6P48051 423 aa12.01□□□□□ -0.49
RFX4-204ENST00000536688 DHX8Q14562 1220 aaKnown RBP12.01□□□□□ -0.49
RFX4-204ENST00000536688 PACS2Q86VP3 889 aa12.01□□□□□ -0.49
RFX4-204ENST00000536688 FAM135BQ49AJ0 1406 aa12.01□□□□□ -0.49
RFX4-204ENST00000536688 MAST1Q9Y2H9 1570 aa12.01□□□□□ -0.49
RFX4-204ENST00000536688 MMS22LQ6ZRQ5 1243 aa12.01□□□□□ -0.49
RFX4-204ENST00000536688 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
RFX4-204ENST00000536688 TSR2Q969E8 191 aaKnown RBP12.01□□□□□ -0.49
RFX4-204ENST00000536688 MRFAP1L1Q96HT8 127 aa12.01□□□□□ -0.49
RFX4-204ENST00000536688 MKRN1Q9UHC7 482 aaKnown RBP12.01□□□□□ -0.49
RFX4-204ENST00000536688 MYO3AQ8NEV4 1616 aa12□□□□□ -0.49
RFX4-204ENST00000536688 ATP6V1AP38606 617 aa12□□□□□ -0.49
RFX4-204ENST00000536688 ST5P78524 1137 aa12□□□□□ -0.49
RFX4-204ENST00000536688 MAP3K11Q16584 847 aa12□□□□□ -0.49
RFX4-204ENST00000536688 REXO1L1PQ8IX06 675 aa12□□□□□ -0.49
RFX4-204ENST00000536688 CCAR2Q8N163 923 aaKnown RBP12□□□□□ -0.49
RFX4-204ENST00000536688 DRC1Q96MC2 740 aa12□□□□□ -0.49
RFX4-204ENST00000536688 TRIM5Q9C035 493 aa12□□□□□ -0.49
RFX4-204ENST00000536688 RBM28Q9NW13 759 aaKnown RBP12□□□□□ -0.49
RFX4-204ENST00000536688 CLIP2Q9UDT6 1046 aa12□□□□□ -0.49
RFX4-204ENST00000536688 CNPY2Q9Y2B0 182 aa12□□□□□ -0.49
RFX4-204ENST00000536688 MRVI1Q9Y6F6 885 aa12□□□□□ -0.49
RFX4-204ENST00000536688 ABCC4O15439 1325 aa12□□□□□ -0.49
RFX4-204ENST00000536688 TYRO3Q06418 890 aa11.99□□□□□ -0.49
RFX4-204ENST00000536688 RBM43Q6ZSC3 357 aaKnown RBP11.99□□□□□ -0.49
RFX4-204ENST00000536688 MSL3Q8N5Y2 521 aaKnown RBP11.99□□□□□ -0.49
RFX4-204ENST00000536688 NEURL4Q96JN8 1562 aa11.99□□□□□ -0.49
RFX4-204ENST00000536688 CALRP27797 417 aaKnown RBP11.99□□□□□ -0.49
RFX4-204ENST00000536688 CORO7P57737 925 aa11.99□□□□□ -0.49
RFX4-204ENST00000536688 ERCC6LQ2NKX8 1250 aa11.99□□□□□ -0.49
RFX4-204ENST00000536688 LEKR1Q6ZMV7 388 aa11.99□□□□□ -0.49
RFX4-204ENST00000536688 GPATCH11Q8N954 259 aa11.99□□□□□ -0.49
RFX4-204ENST00000536688 ORC3Q9UBD5 711 aaPredicted RBP11.99□□□□□ -0.49
RFX4-204ENST00000536688 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.99□□□□□ -0.49
RFX4-204ENST00000536688 NSD2O96028 1365 aa11.99□□□□□ -0.49
RFX4-204ENST00000536688 POLR3GO15318 223 aaPredicted RBP11.98□□□□□ -0.49
RFX4-204ENST00000536688 OAS2P29728 719 aaKnown RBP11.98□□□□□ -0.49
RFX4-204ENST00000536688 ARHGAP29Q52LW3 1261 aa11.98□□□□□ -0.49
RFX4-204ENST00000536688 CCDC158Q5M9N0 1113 aa11.98□□□□□ -0.49
RFX4-204ENST00000536688 OSBPL3Q9H4L5 887 aa11.98□□□□□ -0.49
RFX4-204ENST00000536688 CBX8Q9HC52 389 aa11.98□□□□□ -0.49
RFX4-204ENST00000536688 NRBP1Q9UHY1 535 aa11.98□□□□□ -0.49
RFX4-204ENST00000536688 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.98□□□□□ -0.49
RFX4-204ENST00000536688 GLI2P10070 1586 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms