RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 NLGN1Q8N2Q7 840 aa18.9■□□□□ 0.62
UBE3B-206ENST00000536398 PNNQ9H307 717 aaKnown RBP18.9■□□□□ 0.62
UBE3B-206ENST00000536398 MAPK8IP3Q9UPT6 1336 aa18.9■□□□□ 0.62
UBE3B-206ENST00000536398 A1BGP04217 495 aa18.89■□□□□ 0.61
UBE3B-206ENST00000536398 PELP1Q8IZL8 1130 aaKnown RBP18.89■□□□□ 0.61
UBE3B-206ENST00000536398 CD2APQ9Y5K6 639 aa18.89■□□□□ 0.61
UBE3B-206ENST00000536398 USP42Q9H9J4 1324 aaKnown RBP18.89■□□□□ 0.61
UBE3B-206ENST00000536398 STARD3NLO95772 234 aa18.88■□□□□ 0.61
UBE3B-206ENST00000536398 TAF7Q15545 349 aaPredicted RBP18.88■□□□□ 0.61
UBE3B-206ENST00000536398 GPR162Q16538 588 aa18.88■□□□□ 0.61
UBE3B-206ENST00000536398 USPL1Q5W0Q7 1092 aa18.88■□□□□ 0.61
UBE3B-206ENST00000536398 ADAMTS8Q9UP79 889 aa18.88■□□□□ 0.61
UBE3B-206ENST00000536398 USP16Q9Y5T5 823 aa18.88■□□□□ 0.61
UBE3B-206ENST00000536398 C4AP0C0L4 1744 aa18.88■□□□□ 0.61
UBE3B-206ENST00000536398 RRP7AQ9Y3A4 280 aaKnown RBP18.87■□□□□ 0.61
UBE3B-206ENST00000536398 COL15A1P39059 1388 aa18.86■□□□□ 0.61
UBE3B-206ENST00000536398 PIP4K2AP48426 406 aaPredicted RBP18.86■□□□□ 0.61
UBE3B-206ENST00000536398 EIF5P55010 431 aaKnown RBP18.86■□□□□ 0.61
UBE3B-206ENST00000536398 RIPK4P57078 832 aa18.86■□□□□ 0.61
UBE3B-206ENST00000536398 TEX13AQ9BXU3 409 aaPredicted RBP18.86■□□□□ 0.61
UBE3B-206ENST00000536398 WWC3Q9ULE0 1092 aa18.86■□□□□ 0.61
UBE3B-206ENST00000536398 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
UBE3B-206ENST00000536398 ZPR1O75312 459 aa18.85■□□□□ 0.61
UBE3B-206ENST00000536398 YBX3P16989 372 aaKnown RBP eCLIP18.85■□□□□ 0.61
UBE3B-206ENST00000536398 TMPOP42166 694 aaKnown RBP18.85■□□□□ 0.61
UBE3B-206ENST00000536398 DDR1Q08345 913 aa18.85■□□□□ 0.61
UBE3B-206ENST00000536398 WDR43Q15061 677 aaKnown RBP eCLIP18.85■□□□□ 0.61
UBE3B-206ENST00000536398 CCDC184Q52MB2 194 aa18.85■□□□□ 0.61
UBE3B-206ENST00000536398 BCL2L12Q9HB09 334 aa18.85■□□□□ 0.61
UBE3B-206ENST00000536398 NARFQ9UHQ1 456 aa18.85■□□□□ 0.61
UBE3B-206ENST00000536398 YY1P25490 414 aa18.84■□□□□ 0.61
UBE3B-206ENST00000536398 NEUROD2Q15784 382 aa18.84■□□□□ 0.61
UBE3B-206ENST00000536398 ZNF330Q9Y3S2 320 aaPredicted RBP18.84■□□□□ 0.61
UBE3B-206ENST00000536398 PARP3Q9Y6F1 533 aa18.84■□□□□ 0.61
UBE3B-206ENST00000536398 SNRPA1P09661 255 aaKnown RBP18.83■□□□□ 0.6
UBE3B-206ENST00000536398 TM4SF1P30408 202 aa18.83■□□□□ 0.6
UBE3B-206ENST00000536398 RUNDC1Q96C34 613 aa18.82■□□□□ 0.6
UBE3B-206ENST00000536398 TBC1D2BQ9UPU7 963 aa18.82■□□□□ 0.6
UBE3B-206ENST00000536398 POLRMTO00411 1230 aaKnown RBP18.81■□□□□ 0.6
UBE3B-206ENST00000536398 IL6STP40189 918 aaPredicted RBP18.8■□□□□ 0.6
UBE3B-206ENST00000536398 EIF4A1P60842 406 aaKnown RBP18.8■□□□□ 0.6
UBE3B-206ENST00000536398 NFIXQ14938 502 aa18.8■□□□□ 0.6
UBE3B-206ENST00000536398 PNISRQ8TF01 805 aaKnown RBP18.8■□□□□ 0.6
UBE3B-206ENST00000536398 A0A0G2JLW4 131 aa18.79■□□□□ 0.6
UBE3B-206ENST00000536398 NBPF26B4DH59 902 aa18.79■□□□□ 0.6
UBE3B-206ENST00000536398 NBPF10Q6P3W6 841 aaKnown RBP18.79■□□□□ 0.6
UBE3B-206ENST00000536398 NBPF15Q8N660 670 aa18.79■□□□□ 0.6
UBE3B-206ENST00000536398 TRIM35Q9UPQ4 493 aa18.79■□□□□ 0.6
UBE3B-206ENST00000536398 C10orf71Q711Q0 1435 aa18.78■□□□□ 0.6
UBE3B-206ENST00000536398 A0A087WZG4 1122 aa18.78■□□□□ 0.6
UBE3B-206ENST00000536398 GIGYF1O75420 1035 aaPredicted RBP18.77■□□□□ 0.6
UBE3B-206ENST00000536398 DPEP1P16444 411 aa18.77■□□□□ 0.6
UBE3B-206ENST00000536398 BICDL1Q6ZP65 573 aa18.77■□□□□ 0.6
UBE3B-206ENST00000536398 TSPYL4Q9UJ04 414 aa18.77■□□□□ 0.6
UBE3B-206ENST00000536398 PXDNLA1KZ92 1463 aa18.77■□□□□ 0.59
UBE3B-206ENST00000536398 TBC1D9BQ66K14 1250 aa18.76■□□□□ 0.59
UBE3B-206ENST00000536398 KDM3BQ7LBC6 1761 aa18.76■□□□□ 0.59
UBE3B-206ENST00000536398 CAMTA2O94983 1202 aa18.75■□□□□ 0.59
UBE3B-206ENST00000536398 TGFB2P61812 414 aa18.75■□□□□ 0.59
UBE3B-206ENST00000536398 LMOD3Q0VAK6 560 aa18.75■□□□□ 0.59
UBE3B-206ENST00000536398 APAF1O14727 1248 aa18.74■□□□□ 0.59
UBE3B-206ENST00000536398 GRIN3BO60391 1043 aa18.74■□□□□ 0.59
UBE3B-206ENST00000536398 SERPINB2P05120 415 aa18.74■□□□□ 0.59
UBE3B-206ENST00000536398 KCNA3P22001 575 aa18.74■□□□□ 0.59
UBE3B-206ENST00000536398 DZIP3Q86Y13 1208 aaKnown RBP18.74■□□□□ 0.59
UBE3B-206ENST00000536398 KIF13BQ9NQT8 1826 aa18.73■□□□□ 0.59
UBE3B-206ENST00000536398 SENP3-EIF4A1A0A087X0R7 540 aa18.73■□□□□ 0.59
UBE3B-206ENST00000536398 LAS1LQ9Y4W2 734 aaKnown RBP18.73■□□□□ 0.59
UBE3B-206ENST00000536398 KIAA1551Q9HCM1 1747 aa18.72■□□□□ 0.59
UBE3B-206ENST00000536398 ANP32CO43423 234 aa18.72■□□□□ 0.59
UBE3B-206ENST00000536398 CHRNA5P30532 468 aa18.72■□□□□ 0.59
UBE3B-206ENST00000536398 NPM2Q86SE8 214 aaKnown RBP18.72■□□□□ 0.59
UBE3B-206ENST00000536398 NGEFQ8N5V2 710 aa18.72■□□□□ 0.59
UBE3B-206ENST00000536398 N4BP2Q86UW6 1770 aaPredicted RBP18.72■□□□□ 0.59
UBE3B-206ENST00000536398 CHL1O00533 1208 aa18.71■□□□□ 0.59
UBE3B-206ENST00000536398 KRT24Q2M2I5 525 aa18.71■□□□□ 0.59
UBE3B-206ENST00000536398 CCDC24Q8N4L8 307 aa18.71■□□□□ 0.59
UBE3B-206ENST00000536398 BABAM1Q9NWV8 329 aa18.7■□□□□ 0.58
UBE3B-206ENST00000536398 BCS1LQ9Y276 419 aa18.7■□□□□ 0.58
UBE3B-206ENST00000536398 CARMIL3Q8ND23 1372 aa18.69■□□□□ 0.58
UBE3B-206ENST00000536398 MYL6BP14649 208 aa18.69■□□□□ 0.58
UBE3B-206ENST00000536398 EIF2S2P20042 333 aaKnown RBP18.68■□□□□ 0.58
UBE3B-206ENST00000536398 HLFQ16534 295 aa18.68■□□□□ 0.58
UBE3B-206ENST00000536398 TTLL7Q6ZT98 887 aa18.68■□□□□ 0.58
UBE3B-206ENST00000536398 ZNF784Q8NCA9 323 aaPredicted RBP18.68■□□□□ 0.58
UBE3B-206ENST00000536398 MRS2Q9HD23 443 aa18.68■□□□□ 0.58
UBE3B-206ENST00000536398 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
UBE3B-206ENST00000536398 SCN7AQ01118 1682 aa18.67■□□□□ 0.58
UBE3B-206ENST00000536398 NECTIN2Q92692 538 aa18.67■□□□□ 0.58
UBE3B-206ENST00000536398 SETDB2Q96T68 719 aa18.67■□□□□ 0.58
UBE3B-206ENST00000536398 ANXA1P04083 346 aa18.66■□□□□ 0.58
UBE3B-206ENST00000536398 PDIA6Q15084 440 aa18.66■□□□□ 0.58
UBE3B-206ENST00000536398 PROSER3Q2NL68 480 aa18.66■□□□□ 0.58
UBE3B-206ENST00000536398 PRR5LQ6MZQ0 368 aa18.66■□□□□ 0.58
UBE3B-206ENST00000536398 PIM2Q9P1W9 311 aa18.66■□□□□ 0.58
UBE3B-206ENST00000536398 CHD4Q14839 1912 aa18.66■□□□□ 0.58
UBE3B-206ENST00000536398 NRXN2Q9P2S2 1712 aa18.66■□□□□ 0.58
UBE3B-206ENST00000536398 LAMB4A4D0S4 1761 aa18.65■□□□□ 0.58
UBE3B-206ENST00000536398 CLEC4GQ6UXB4 293 aa18.65■□□□□ 0.58
UBE3B-206ENST00000536398 DALRD3Q5D0E6 543 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms