RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 ARXQ96QS3 562 aa29.16■■■□□ 2.26
VPS37C-202ENST00000535818 COL24A1Q17RW2 1714 aa29.16■■■□□ 2.26
VPS37C-202ENST00000535818 ARHGEF1Q92888 912 aaKnown RBP29.15■■■□□ 2.26
VPS37C-202ENST00000535818 KDM3BQ7LBC6 1761 aa29.15■■■□□ 2.26
VPS37C-202ENST00000535818 APAF1O14727 1248 aa29.14■■■□□ 2.26
VPS37C-202ENST00000535818 ZBTB1Q9Y2K1 713 aa29.14■■■□□ 2.26
VPS37C-202ENST00000535818 C4AP0C0L4 1744 aa29.12■■■□□ 2.25
VPS37C-202ENST00000535818 SNRPA1P09661 255 aaKnown RBP29.12■■■□□ 2.25
VPS37C-202ENST00000535818 CANXP27824 592 aaKnown RBP29.11■■■□□ 2.25
VPS37C-202ENST00000535818 TSPYL4Q9UJ04 414 aa29.11■■■□□ 2.25
VPS37C-202ENST00000535818 TRIM35Q9UPQ4 493 aa29.11■■■□□ 2.25
VPS37C-202ENST00000535818 SOS1Q07889 1333 aaPredicted RBP29.11■■■□□ 2.25
VPS37C-202ENST00000535818 KLHL34Q8N239 644 aa29.1■■■□□ 2.25
VPS37C-202ENST00000535818 COL15A1P39059 1388 aa29.09■■■□□ 2.25
VPS37C-202ENST00000535818 FHDC1Q9C0D6 1143 aaPredicted RBP29.08■■■□□ 2.25
VPS37C-202ENST00000535818 PRAMEF22A3QJZ6 481 aa29.07■■■□□ 2.24
VPS37C-202ENST00000535818 USP16Q9Y5T5 823 aa29.07■■■□□ 2.24
VPS37C-202ENST00000535818 EIF4A1P60842 406 aaKnown RBP29.06■■■□□ 2.24
VPS37C-202ENST00000535818 BABAM1Q9NWV8 329 aa29.06■■■□□ 2.24
VPS37C-202ENST00000535818 ZNF330Q9Y3S2 320 aaPredicted RBP29.06■■■□□ 2.24
VPS37C-202ENST00000535818 LAS1LQ9Y4W2 734 aaKnown RBP29.06■■■□□ 2.24
VPS37C-202ENST00000535818 USP42Q9H9J4 1324 aaKnown RBP29.05■■■□□ 2.24
VPS37C-202ENST00000535818 ZPR1O75312 459 aa29.05■■■□□ 2.24
VPS37C-202ENST00000535818 A1BGP04217 495 aa29.05■■■□□ 2.24
VPS37C-202ENST00000535818 NPM2Q86SE8 214 aaKnown RBP29.05■■■□□ 2.24
VPS37C-202ENST00000535818 NLGN1Q8N2Q7 840 aa29.05■■■□□ 2.24
VPS37C-202ENST00000535818 SRP68Q9UHB9 627 aaKnown RBP29.05■■■□□ 2.24
VPS37C-202ENST00000535818 LAMB4A4D0S4 1761 aa29.04■■■□□ 2.24
VPS37C-202ENST00000535818 GYS1P13807 737 aa29.04■■■□□ 2.24
VPS37C-202ENST00000535818 FAM9BQ8IZU0 186 aa29.03■■■□□ 2.24
VPS37C-202ENST00000535818 A0A087WZG4 1122 aa29.02■■■□□ 2.24
VPS37C-202ENST00000535818 SYT17Q9BSW7 474 aa29.02■■■□□ 2.24
VPS37C-202ENST00000535818 IL6STP40189 918 aaPredicted RBP29.01■■■□□ 2.23
VPS37C-202ENST00000535818 EIF5P55010 431 aaKnown RBP29.01■■■□□ 2.23
VPS37C-202ENST00000535818 GIGYF1O75420 1035 aaPredicted RBP29■■■□□ 2.23
VPS37C-202ENST00000535818 MMP10P09238 476 aa29■■■□□ 2.23
VPS37C-202ENST00000535818 CALD1Q05682 793 aaKnown RBP29■■■□□ 2.23
VPS37C-202ENST00000535818 USPL1Q5W0Q7 1092 aa29■■■□□ 2.23
VPS37C-202ENST00000535818 NARFQ9UHQ1 456 aa29■■■□□ 2.23
VPS37C-202ENST00000535818 SENP3-EIF4A1A0A087X0R7 540 aa28.99■■■□□ 2.23
VPS37C-202ENST00000535818 PIP4K2AP48426 406 aaPredicted RBP28.99■■■□□ 2.23
VPS37C-202ENST00000535818 CHL1O00533 1208 aa28.98■■■□□ 2.23
VPS37C-202ENST00000535818 FKBP8Q14318 412 aa28.97■■■□□ 2.23
VPS37C-202ENST00000535818 CFAP44Q96MT7 982 aa28.96■■■□□ 2.23
VPS37C-202ENST00000535818 PARP3Q9Y6F1 533 aa28.95■■■□□ 2.22
VPS37C-202ENST00000535818 TBC1D2BQ9UPU7 963 aa28.94■■■□□ 2.22
VPS37C-202ENST00000535818 DCAF8L1A6NGE4 600 aa28.93■■■□□ 2.22
VPS37C-202ENST00000535818 GNAI1P63096 354 aa28.93■■■□□ 2.22
VPS37C-202ENST00000535818 IFT57Q9NWB7 429 aa28.93■■■□□ 2.22
VPS37C-202ENST00000535818 DIEXFQ68CQ4 756 aaKnown RBP28.92■■■□□ 2.22
VPS37C-202ENST00000535818 DZIP3Q86Y13 1208 aaKnown RBP28.92■■■□□ 2.22
VPS37C-202ENST00000535818 SCN7AQ01118 1682 aa28.92■■■□□ 2.22
VPS37C-202ENST00000535818 NBPF26B4DH59 902 aa28.91■■■□□ 2.22
VPS37C-202ENST00000535818 CCDC27Q2M243 656 aa28.91■■■□□ 2.22
VPS37C-202ENST00000535818 NBPF10Q6P3W6 841 aaKnown RBP28.91■■■□□ 2.22
VPS37C-202ENST00000535818 NBPF15Q8N660 670 aa28.91■■■□□ 2.22
VPS37C-202ENST00000535818 MBIPQ9NS73 344 aa28.91■■■□□ 2.22
VPS37C-202ENST00000535818 CD2APQ9Y5K6 639 aa28.91■■■□□ 2.22
VPS37C-202ENST00000535818 EIF2S2P20042 333 aaKnown RBP28.9■■■□□ 2.22
VPS37C-202ENST00000535818 SALL2Q9Y467 1007 aaPredicted RBP28.9■■■□□ 2.22
VPS37C-202ENST00000535818 NLGN2Q8NFZ4 835 aa28.89■■■□□ 2.22
VPS37C-202ENST00000535818 BCL2L12Q9HB09 334 aa28.89■■■□□ 2.22
VPS37C-202ENST00000535818 CCER2I3L3R5 266 aa28.88■■■□□ 2.21
VPS37C-202ENST00000535818 ZNF853P0CG23 659 aa28.88■■■□□ 2.21
VPS37C-202ENST00000535818 KRT24Q2M2I5 525 aa28.88■■■□□ 2.21
VPS37C-202ENST00000535818 WWC1Q8IX03 1113 aa28.88■■■□□ 2.21
VPS37C-202ENST00000535818 MYL6BP14649 208 aa28.87■■■□□ 2.21
VPS37C-202ENST00000535818 DDR1Q08345 913 aa28.87■■■□□ 2.21
VPS37C-202ENST00000535818 NCBP3Q53F19 620 aaKnown RBP28.87■■■□□ 2.21
VPS37C-202ENST00000535818 BCORQ6W2J9 1755 aa28.87■■■□□ 2.21
VPS37C-202ENST00000535818 ERBB4Q15303 1308 aa28.87■■■□□ 2.21
VPS37C-202ENST00000535818 CAMTA2O94983 1202 aa28.86■■■□□ 2.21
VPS37C-202ENST00000535818 TM4SF1P30408 202 aa28.86■■■□□ 2.21
VPS37C-202ENST00000535818 NFIXQ14938 502 aa28.86■■■□□ 2.21
VPS37C-202ENST00000535818 NGEFQ8N5V2 710 aa28.86■■■□□ 2.21
VPS37C-202ENST00000535818 BICDL1Q6ZP65 573 aa28.85■■■□□ 2.21
VPS37C-202ENST00000535818 POLRMTO00411 1230 aaKnown RBP28.84■■■□□ 2.21
VPS37C-202ENST00000535818 NECTIN2Q92692 538 aa28.84■■■□□ 2.21
VPS37C-202ENST00000535818 ZNF652Q9Y2D9 606 aa28.83■■■□□ 2.21
VPS37C-202ENST00000535818 C10orf71Q711Q0 1435 aa28.83■■■□□ 2.21
VPS37C-202ENST00000535818 HOXB7P09629 217 aa28.82■■■□□ 2.2
VPS37C-202ENST00000535818 TBC1D9BQ66K14 1250 aa28.82■■■□□ 2.2
VPS37C-202ENST00000535818 PELP1Q8IZL8 1130 aaKnown RBP28.82■■■□□ 2.2
VPS37C-202ENST00000535818 DUSP27Q5VZP5 1158 aa28.81■■■□□ 2.2
VPS37C-202ENST00000535818 HDGFL1Q5TGJ6 251 aa28.8■■■□□ 2.2
VPS37C-202ENST00000535818 KIF6Q6ZMV9 814 aa28.8■■■□□ 2.2
VPS37C-202ENST00000535818 KIF13BQ9NQT8 1826 aa28.8■■■□□ 2.2
VPS37C-202ENST00000535818 IL16Q14005 1332 aa28.79■■■□□ 2.2
VPS37C-202ENST00000535818 SERPINB2P05120 415 aa28.79■■■□□ 2.2
VPS37C-202ENST00000535818 GPR162Q16538 588 aa28.79■■■□□ 2.2
VPS37C-202ENST00000535818 CLEC4GQ6UXB4 293 aa28.78■■■□□ 2.2
VPS37C-202ENST00000535818 TSR2Q969E8 191 aaKnown RBP28.78■■■□□ 2.2
VPS37C-202ENST00000535818 CARMIL3Q8ND23 1372 aa28.77■■■□□ 2.2
VPS37C-202ENST00000535818 ANXA1P04083 346 aa28.77■■■□□ 2.2
VPS37C-202ENST00000535818 PDIA6Q15084 440 aa28.77■■■□□ 2.2
VPS37C-202ENST00000535818 WDR63Q8IWG1 891 aa28.77■■■□□ 2.2
VPS37C-202ENST00000535818 SETDB2Q96T68 719 aa28.77■■■□□ 2.2
VPS37C-202ENST00000535818 AFDNP55196 1824 aaKnown RBP28.77■■■□□ 2.2
VPS37C-202ENST00000535818 ELL2O00472 640 aaPredicted RBP28.76■■■□□ 2.19
VPS37C-202ENST00000535818 PROSER3Q2NL68 480 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms