RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 TEX13AQ9BXU3 409 aaPredicted RBP17.09■□□□□ 0.33
TMEM258-202ENST00000535042 PNPLA7Q6ZV29 1317 aa17.09■□□□□ 0.33
TMEM258-202ENST00000535042 COL5A3P25940 1745 aaPredicted RBP17.08■□□□□ 0.32
TMEM258-202ENST00000535042 STARD3NLO95772 234 aa17.08■□□□□ 0.32
TMEM258-202ENST00000535042 A1BGP04217 495 aa17.08■□□□□ 0.32
TMEM258-202ENST00000535042 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.32
TMEM258-202ENST00000535042 HNRNPUQ00839 825 aaKnown RBP eCLIP17.08■□□□□ 0.32
TMEM258-202ENST00000535042 CCDC87Q9NVE4 849 aa17.08■□□□□ 0.32
TMEM258-202ENST00000535042 ZBTB1Q9Y2K1 713 aa17.08■□□□□ 0.32
TMEM258-202ENST00000535042 RPS6KA4O75676 772 aa17.07■□□□□ 0.32
TMEM258-202ENST00000535042 COL23A1Q86Y22 540 aaPredicted RBP17.07■□□□□ 0.32
TMEM258-202ENST00000535042 FANCIQ9NVI1 1328 aa17.06■□□□□ 0.32
TMEM258-202ENST00000535042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.06■□□□□ 0.32
TMEM258-202ENST00000535042 PHF14O94880 888 aa17.06■□□□□ 0.32
TMEM258-202ENST00000535042 PIP4K2AP48426 406 aaPredicted RBP17.06■□□□□ 0.32
TMEM258-202ENST00000535042 C8orf58Q8NAV2 365 aa17.06■□□□□ 0.32
TMEM258-202ENST00000535042 CDCA7LQ96GN5 454 aa17.06■□□□□ 0.32
TMEM258-202ENST00000535042 NBPF26B4DH59 902 aa17.05■□□□□ 0.32
TMEM258-202ENST00000535042 MSH5O43196 834 aa17.05■□□□□ 0.32
TMEM258-202ENST00000535042 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
TMEM258-202ENST00000535042 GOLGA2Q08379 1002 aa17.05■□□□□ 0.32
TMEM258-202ENST00000535042 DUSP27Q5VZP5 1158 aa17.05■□□□□ 0.32
TMEM258-202ENST00000535042 NBPF10Q6P3W6 841 aaKnown RBP17.05■□□□□ 0.32
TMEM258-202ENST00000535042 NBPF15Q8N660 670 aa17.05■□□□□ 0.32
TMEM258-202ENST00000535042 TSPYL6Q8N831 410 aa17.05■□□□□ 0.32
TMEM258-202ENST00000535042 RTCBQ9Y3I0 505 aaKnown RBP17.05■□□□□ 0.32
TMEM258-202ENST00000535042 MYH14Q7Z406 1995 aaKnown RBP17.05■□□□□ 0.32
TMEM258-202ENST00000535042 SOS1Q07889 1333 aaPredicted RBP17.04■□□□□ 0.32
TMEM258-202ENST00000535042 ELL2O00472 640 aaPredicted RBP17.04■□□□□ 0.32
TMEM258-202ENST00000535042 SSFA2P28290 1259 aa17.04■□□□□ 0.32
TMEM258-202ENST00000535042 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
TMEM258-202ENST00000535042 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
TMEM258-202ENST00000535042 EIF2S2P20042 333 aaKnown RBP17.03■□□□□ 0.32
TMEM258-202ENST00000535042 SLFN5Q08AF3 891 aa17.03■□□□□ 0.32
TMEM258-202ENST00000535042 ARHGEF1Q92888 912 aaKnown RBP17.03■□□□□ 0.32
TMEM258-202ENST00000535042 UBR3Q6ZT12 1888 aa17.02■□□□□ 0.32
TMEM258-202ENST00000535042 EIF5P55010 431 aaKnown RBP17.02■□□□□ 0.32
TMEM258-202ENST00000535042 EXOSC9Q06265 439 aaKnown RBP17.02■□□□□ 0.32
TMEM258-202ENST00000535042 TRAPPC3LQ5T215 181 aa17.02■□□□□ 0.32
TMEM258-202ENST00000535042 FLAD1Q8NFF5 587 aa17.02■□□□□ 0.32
TMEM258-202ENST00000535042 NECTIN2Q92692 538 aa17.02■□□□□ 0.32
TMEM258-202ENST00000535042 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
TMEM258-202ENST00000535042 E9PSI1 815 aa17.01■□□□□ 0.31
TMEM258-202ENST00000535042 HOXB7P09629 217 aa17.01■□□□□ 0.31
TMEM258-202ENST00000535042 PDIA6Q15084 440 aa17.01■□□□□ 0.31
TMEM258-202ENST00000535042 CASZ1Q86V15 1759 aa17■□□□□ 0.31
TMEM258-202ENST00000535042 ZBTB7AO95365 584 aa17■□□□□ 0.31
TMEM258-202ENST00000535042 ADRA2BP18089 450 aa17■□□□□ 0.31
TMEM258-202ENST00000535042 IL6STP40189 918 aaPredicted RBP17■□□□□ 0.31
TMEM258-202ENST00000535042 TRMT2AQ8IZ69 625 aaKnown RBP17■□□□□ 0.31
TMEM258-202ENST00000535042 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
TMEM258-202ENST00000535042 ANXA1P04083 346 aa16.99■□□□□ 0.31
TMEM258-202ENST00000535042 PROSER3Q2NL68 480 aa16.99■□□□□ 0.31
TMEM258-202ENST00000535042 TWISTNBQ3B726 338 aaPredicted RBP16.99■□□□□ 0.31
TMEM258-202ENST00000535042 HDGFL1Q5TGJ6 251 aa16.99■□□□□ 0.31
TMEM258-202ENST00000535042 LRP10Q7Z4F1 713 aa16.99■□□□□ 0.31
TMEM258-202ENST00000535042 SRP68Q9UHB9 627 aaKnown RBP16.99■□□□□ 0.31
TMEM258-202ENST00000535042 ZNF330Q9Y3S2 320 aaPredicted RBP16.99■□□□□ 0.31
TMEM258-202ENST00000535042 LAMB4A4D0S4 1761 aa16.99■□□□□ 0.31
TMEM258-202ENST00000535042 COL15A1P39059 1388 aa16.99■□□□□ 0.31
TMEM258-202ENST00000535042 VAMP4O75379 141 aa16.98■□□□□ 0.31
TMEM258-202ENST00000535042 MYL6BP14649 208 aa16.98■□□□□ 0.31
TMEM258-202ENST00000535042 ERBB4Q15303 1308 aa16.97■□□□□ 0.31
TMEM258-202ENST00000535042 ZBED9Q6R2W3 1325 aa16.97■□□□□ 0.31
TMEM258-202ENST00000535042 RFC4P35249 363 aa16.97■□□□□ 0.31
TMEM258-202ENST00000535042 SLC16A10Q8TF71 515 aa16.97■□□□□ 0.31
TMEM258-202ENST00000535042 CHPF2Q9P2E5 772 aa16.97■□□□□ 0.31
TMEM258-202ENST00000535042 TBC1D2BQ9UPU7 963 aa16.97■□□□□ 0.31
TMEM258-202ENST00000535042 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
TMEM258-202ENST00000535042 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
TMEM258-202ENST00000535042 TCERG1O14776 1098 aaKnown RBP16.96■□□□□ 0.31
TMEM258-202ENST00000535042 MSL1Q68DK7 614 aa16.96■□□□□ 0.31
TMEM258-202ENST00000535042 DDX21Q9NR30 783 aaKnown RBP eCLIP16.96■□□□□ 0.31
TMEM258-202ENST00000535042 NARFQ9UHQ1 456 aa16.96■□□□□ 0.31
TMEM258-202ENST00000535042 A0A087WZG4 1122 aa16.95■□□□□ 0.3
TMEM258-202ENST00000535042 GYS1P13807 737 aa16.95■□□□□ 0.3
TMEM258-202ENST00000535042 USPL1Q5W0Q7 1092 aa16.95■□□□□ 0.3
TMEM258-202ENST00000535042 MTFR1LQ9H019 292 aa16.95■□□□□ 0.3
TMEM258-202ENST00000535042 BCL2L12Q9HB09 334 aa16.95■□□□□ 0.3
TMEM258-202ENST00000535042 TTLL7Q6ZT98 887 aa16.94■□□□□ 0.3
TMEM258-202ENST00000535042 DZIP3Q86Y13 1208 aaKnown RBP16.94■□□□□ 0.3
TMEM258-202ENST00000535042 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
TMEM258-202ENST00000535042 CAMTA2O94983 1202 aa16.93■□□□□ 0.3
TMEM258-202ENST00000535042 PTGER2P43116 358 aa16.93■□□□□ 0.3
TMEM258-202ENST00000535042 FKBP8Q14318 412 aa16.93■□□□□ 0.3
TMEM258-202ENST00000535042 CCDC30Q5VVM6 783 aa16.93■□□□□ 0.3
TMEM258-202ENST00000535042 ARXQ96QS3 562 aa16.93■□□□□ 0.3
TMEM258-202ENST00000535042 SGIP1Q9BQI5 828 aa16.93■□□□□ 0.3
TMEM258-202ENST00000535042 DBF4Q9UBU7 674 aaPredicted RBP16.93■□□□□ 0.3
TMEM258-202ENST00000535042 ZPR1O75312 459 aa16.92■□□□□ 0.3
TMEM258-202ENST00000535042 COPS6Q7L5N1 327 aa16.92■□□□□ 0.3
TMEM258-202ENST00000535042 NPM2Q86SE8 214 aaKnown RBP16.92■□□□□ 0.3
TMEM258-202ENST00000535042 XAGE3Q8WTP9 111 aa16.92■□□□□ 0.3
TMEM258-202ENST00000535042 SPON1Q9HCB6 807 aa16.92■□□□□ 0.3
TMEM258-202ENST00000535042 PHAXQ9H814 394 aaKnown RBP16.91■□□□□ 0.3
TMEM258-202ENST00000535042 AIMP1Q12904 312 aaKnown RBP16.9■□□□□ 0.3
TMEM258-202ENST00000535042 HLFQ16534 295 aa16.9■□□□□ 0.3
TMEM258-202ENST00000535042 NLGN1Q8N2Q7 840 aa16.9■□□□□ 0.3
TMEM258-202ENST00000535042 YTHDC1Q96MU7 727 aaKnown RBP16.9■□□□□ 0.3
TMEM258-202ENST00000535042 HYPKQ9NX55 129 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms