RNA–Protein interactions for RNA: ENST00000534903.1

NPIPB3-206, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-206ENST00000534903 NBPF6Q5VWK0 638 aa6.97□□□□□ -1.29
NPIPB3-206ENST00000534903 ATF7IPQ6VMQ6 1270 aa6.97□□□□□ -1.29
NPIPB3-206ENST00000534903 MCM10Q7L590 875 aa6.97□□□□□ -1.29
NPIPB3-206ENST00000534903 DZIP1LQ8IYY4 767 aaKnown RBP6.97□□□□□ -1.29
NPIPB3-206ENST00000534903 PANK1Q8TE04 598 aa6.97□□□□□ -1.29
NPIPB3-206ENST00000534903 ARHGAP45Q92619 1136 aa6.97□□□□□ -1.29
NPIPB3-206ENST00000534903 CLUAP1Q96AJ1 413 aa6.97□□□□□ -1.29
NPIPB3-206ENST00000534903 NBPF4Q96M43 638 aa6.97□□□□□ -1.29
NPIPB3-206ENST00000534903 USP35Q9P2H5 1018 aa6.97□□□□□ -1.29
NPIPB3-206ENST00000534903 SIPA1L3O60292 1781 aaPredicted RBP6.97□□□□□ -1.29
NPIPB3-206ENST00000534903 CASZ1Q86V15 1759 aa6.97□□□□□ -1.29
NPIPB3-206ENST00000534903 CHD4Q14839 1912 aa6.96□□□□□ -1.3
NPIPB3-206ENST00000534903 N4BP2Q86UW6 1770 aaPredicted RBP6.96□□□□□ -1.3
NPIPB3-206ENST00000534903 CHRNA2Q15822 529 aa6.96□□□□□ -1.3
NPIPB3-206ENST00000534903 PLEKHO1Q53GL0 409 aaPredicted RBP6.96□□□□□ -1.3
NPIPB3-206ENST00000534903 AKAP4Q5JQC9 854 aa6.96□□□□□ -1.3
NPIPB3-206ENST00000534903 MRPL50Q8N5N7 158 aaKnown RBP6.96□□□□□ -1.3
NPIPB3-206ENST00000534903 USHBP1Q8N6Y0 703 aa6.96□□□□□ -1.3
NPIPB3-206ENST00000534903 CHMP4BQ9H444 224 aaKnown RBP6.96□□□□□ -1.3
NPIPB3-206ENST00000534903 TSPYL4Q9UJ04 414 aa6.96□□□□□ -1.3
NPIPB3-206ENST00000534903 DDX19BQ9UMR2 479 aa6.96□□□□□ -1.3
NPIPB3-206ENST00000534903 COG6Q9Y2V7 657 aa6.96□□□□□ -1.3
NPIPB3-206ENST00000534903 RGPD3A6NKT7 1758 aaPredicted RBP6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 RGPD4Q7Z3J3 1758 aa6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 GRIN3BO60391 1043 aa6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 RLBP1P12271 317 aa6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 ZC3H6P61129 1189 aaKnown RBP6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 TXNRD1Q16881 649 aa6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 ZNF530Q6P9A1 599 aaPredicted RBP6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 LARP1Q6PKG0 1096 aaKnown RBP6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 TSPYL6Q8N831 410 aa6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 NOB1Q9ULX3 412 aaKnown RBP6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 COL5A2P05997 1499 aaPredicted RBP6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 MRC1P22897 1456 aa6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 MEGF6O75095 1541 aa6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 ABCC4O15439 1325 aa6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 CACNA1FO60840 1977 aa6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 SCN11AQ9UI33 1791 aa6.95□□□□□ -1.3
NPIPB3-206ENST00000534903 PXDNLA1KZ92 1463 aa6.94□□□□□ -1.3
NPIPB3-206ENST00000534903 TCERG1O14776 1098 aaKnown RBP6.94□□□□□ -1.3
NPIPB3-206ENST00000534903 HOXB7P09629 217 aa6.94□□□□□ -1.3
NPIPB3-206ENST00000534903 ATXN8OSP0DMR3 200 aa6.94□□□□□ -1.3
NPIPB3-206ENST00000534903 C1orf141Q5JVX7 400 aa6.94□□□□□ -1.3
NPIPB3-206ENST00000534903 ITPRIPQ8IWB1 547 aa6.94□□□□□ -1.3
NPIPB3-206ENST00000534903 C8orf58Q8NAV2 365 aa6.94□□□□□ -1.3
NPIPB3-206ENST00000534903 API5Q9BZZ5 524 aaKnown RBP6.94□□□□□ -1.3
NPIPB3-206ENST00000534903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.94□□□□□ -1.3
NPIPB3-206ENST00000534903 AXIN2Q9Y2T1 843 aa6.94□□□□□ -1.3
NPIPB3-206ENST00000534903 PTPRCP08575 1304 aa6.94□□□□□ -1.3
NPIPB3-206ENST00000534903 TATP17735 454 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-206ENST00000534903 TAF7Q15545 349 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-206ENST00000534903 DDB1Q16531 1140 aa6.93□□□□□ -1.3
NPIPB3-206ENST00000534903 IL17REQ8NFR9 667 aa6.93□□□□□ -1.3
NPIPB3-206ENST00000534903 SLC16A10Q8TF71 515 aa6.93□□□□□ -1.3
NPIPB3-206ENST00000534903 RAPGEF4Q8WZA2 1011 aa6.93□□□□□ -1.3
NPIPB3-206ENST00000534903 CDCA7Q9BWT1 371 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-206ENST00000534903 CHMP4AQ9BY43 222 aa6.93□□□□□ -1.3
NPIPB3-206ENST00000534903 TNNQ9UQP3 1299 aa6.93□□□□□ -1.3
NPIPB3-206ENST00000534903 SSUH2Q9Y2M2 353 aa6.93□□□□□ -1.3
NPIPB3-206ENST00000534903 WDR17Q8IZU2 1322 aa6.93□□□□□ -1.3
NPIPB3-206ENST00000534903 RNMTO43148 476 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-206ENST00000534903 CSB-PGBD3P0DP91 1061 aa6.92□□□□□ -1.3
NPIPB3-206ENST00000534903 TMEM57Q8N5G2 664 aa6.92□□□□□ -1.3
NPIPB3-206ENST00000534903 GPBP1L1Q9HC44 474 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-206ENST00000534903 NLRP2Q9NX02 1062 aa6.92□□□□□ -1.3
NPIPB3-206ENST00000534903 SPG7Q9UQ90 795 aa6.92□□□□□ -1.3
NPIPB3-206ENST00000534903 WNK3Q9BYP7 1800 aa6.92□□□□□ -1.3
NPIPB3-206ENST00000534903 KDM6AO15550 1401 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-206ENST00000534903 SHANK3Q9BYB0 1731 aa6.91□□□□□ -1.3
NPIPB3-206ENST00000534903 ELL2O00472 640 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-206ENST00000534903 POLD1P28340 1107 aa6.91□□□□□ -1.3
NPIPB3-206ENST00000534903 APLP1P51693 650 aa6.91□□□□□ -1.3
NPIPB3-206ENST00000534903 TEFQ10587 303 aa6.91□□□□□ -1.3
NPIPB3-206ENST00000534903 KRT24Q2M2I5 525 aa6.91□□□□□ -1.3
NPIPB3-206ENST00000534903 CCDC30Q5VVM6 783 aa6.91□□□□□ -1.3
NPIPB3-206ENST00000534903 PTF1AQ7RTS3 328 aa6.91□□□□□ -1.3
NPIPB3-206ENST00000534903 STK31Q9BXU1 1019 aa6.91□□□□□ -1.3
NPIPB3-206ENST00000534903 RWDD1Q9H446 243 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-206ENST00000534903 PAPPAQ13219 1627 aa6.9□□□□□ -1.3
NPIPB3-206ENST00000534903 LAMB4A4D0S4 1761 aa6.9□□□□□ -1.3
NPIPB3-206ENST00000534903 HSP90AB1P08238 724 aaKnown RBP6.9□□□□□ -1.3
NPIPB3-206ENST00000534903 PRELPP51888 382 aa6.9□□□□□ -1.3
NPIPB3-206ENST00000534903 HDAC1Q13547 482 aaPredicted RBP6.9□□□□□ -1.3
NPIPB3-206ENST00000534903 MARCH10Q8NA82 808 aaPredicted RBP6.9□□□□□ -1.3
NPIPB3-206ENST00000534903 ZBTB40Q9NUA8 1239 aa6.9□□□□□ -1.3
NPIPB3-206ENST00000534903 PCDHB15Q9Y5E8 787 aa6.9□□□□□ -1.3
NPIPB3-206ENST00000534903 PCDH11XQ9BZA7 1347 aa6.9□□□□□ -1.3
NPIPB3-206ENST00000534903 PCDH11YQ9BZA8 1340 aa6.9□□□□□ -1.3
NPIPB3-206ENST00000534903 ATP10DQ9P241 1426 aa6.9□□□□□ -1.31
NPIPB3-206ENST00000534903 BTBD11A6QL63 1104 aa6.89□□□□□ -1.31
NPIPB3-206ENST00000534903 PHKG2P15735 406 aa6.89□□□□□ -1.31
NPIPB3-206ENST00000534903 EIF4A1P60842 406 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-206ENST00000534903 MKRN4PQ13434 485 aaPredicted RBP6.89□□□□□ -1.31
NPIPB3-206ENST00000534903 INTS3Q68E01 1043 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-206ENST00000534903 IFNL2Q8IZJ0 200 aa6.89□□□□□ -1.31
NPIPB3-206ENST00000534903 DNAJC5GQ8N7S2 189 aa6.89□□□□□ -1.31
NPIPB3-206ENST00000534903 CARD10Q9BWT7 1032 aa6.89□□□□□ -1.31
NPIPB3-206ENST00000534903 LGR6Q9HBX8 967 aa6.89□□□□□ -1.31
NPIPB3-206ENST00000534903 MIS18AQ9NYP9 233 aa6.89□□□□□ -1.31
NPIPB3-206ENST00000534903 RBM19Q9Y4C8 960 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms