RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 NLGN1Q8N2Q7 840 aa16.96■□□□□ 0.31
CCS-209ENST00000534763 TRIM35Q9UPQ4 493 aa16.96■□□□□ 0.31
CCS-209ENST00000534763 THUMPD2Q9BTF0 503 aaKnown RBP16.95■□□□□ 0.3
CCS-209ENST00000534763 SMIM5Q71RC9 77 aa16.94■□□□□ 0.3
CCS-209ENST00000534763 ZBTB1Q9Y2K1 713 aa16.94■□□□□ 0.3
CCS-209ENST00000534763 RRP7AQ9Y3A4 280 aaKnown RBP16.94■□□□□ 0.3
CCS-209ENST00000534763 MYH14Q7Z406 1995 aaKnown RBP16.94■□□□□ 0.3
CCS-209ENST00000534763 A0A087WZG4 1122 aa16.93■□□□□ 0.3
CCS-209ENST00000534763 APAF1O14727 1248 aa16.93■□□□□ 0.3
CCS-209ENST00000534763 IL6STP40189 918 aaPredicted RBP16.93■□□□□ 0.3
CCS-209ENST00000534763 EIF5P55010 431 aaKnown RBP16.93■□□□□ 0.3
CCS-209ENST00000534763 EIF4A1P60842 406 aaKnown RBP16.93■□□□□ 0.3
CCS-209ENST00000534763 NEUROD2Q15784 382 aa16.93■□□□□ 0.3
CCS-209ENST00000534763 MIS18AQ9NYP9 233 aa16.93■□□□□ 0.3
CCS-209ENST00000534763 USP42Q9H9J4 1324 aaKnown RBP16.93■□□□□ 0.3
CCS-209ENST00000534763 KDM3BQ7LBC6 1761 aa16.92■□□□□ 0.3
CCS-209ENST00000534763 GYS1P13807 737 aa16.92■□□□□ 0.3
CCS-209ENST00000534763 CALD1Q05682 793 aaKnown RBP16.92■□□□□ 0.3
CCS-209ENST00000534763 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
CCS-209ENST00000534763 SYT17Q9BSW7 474 aa16.92■□□□□ 0.3
CCS-209ENST00000534763 FHDC1Q9C0D6 1143 aaPredicted RBP16.92■□□□□ 0.3
CCS-209ENST00000534763 TSPYL4Q9UJ04 414 aa16.92■□□□□ 0.3
CCS-209ENST00000534763 COL15A1P39059 1388 aa16.91■□□□□ 0.3
CCS-209ENST00000534763 CHL1O00533 1208 aa16.91■□□□□ 0.3
CCS-209ENST00000534763 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
CCS-209ENST00000534763 NARFQ9UHQ1 456 aa16.91■□□□□ 0.3
CCS-209ENST00000534763 USP16Q9Y5T5 823 aa16.91■□□□□ 0.3
CCS-209ENST00000534763 ZPR1O75312 459 aa16.9■□□□□ 0.3
CCS-209ENST00000534763 CANXP27824 592 aaKnown RBP16.9■□□□□ 0.3
CCS-209ENST00000534763 CCDC27Q2M243 656 aa16.9■□□□□ 0.3
CCS-209ENST00000534763 CD2APQ9Y5K6 639 aa16.9■□□□□ 0.3
CCS-209ENST00000534763 CFAP44Q96MT7 982 aa16.89■□□□□ 0.29
CCS-209ENST00000534763 C4AP0C0L4 1744 aa16.89■□□□□ 0.29
CCS-209ENST00000534763 RGL2O15211 777 aa16.88■□□□□ 0.29
CCS-209ENST00000534763 A1BGP04217 495 aa16.88■□□□□ 0.29
CCS-209ENST00000534763 MMP10P09238 476 aa16.88■□□□□ 0.29
CCS-209ENST00000534763 PRAMEF22A3QJZ6 481 aa16.87■□□□□ 0.29
CCS-209ENST00000534763 NPM2Q86SE8 214 aaKnown RBP16.87■□□□□ 0.29
CCS-209ENST00000534763 NGEFQ8N5V2 710 aa16.87■□□□□ 0.29
CCS-209ENST00000534763 SRP68Q9UHB9 627 aaKnown RBP16.87■□□□□ 0.29
CCS-209ENST00000534763 ERBB4Q15303 1308 aa16.87■□□□□ 0.29
CCS-209ENST00000534763 ZNF853P0CG23 659 aa16.86■□□□□ 0.29
CCS-209ENST00000534763 TM4SF1P30408 202 aa16.86■□□□□ 0.29
CCS-209ENST00000534763 FKBP8Q14318 412 aa16.86■□□□□ 0.29
CCS-209ENST00000534763 USPL1Q5W0Q7 1092 aa16.86■□□□□ 0.29
CCS-209ENST00000534763 IFT57Q9NWB7 429 aa16.86■□□□□ 0.29
CCS-209ENST00000534763 PARP3Q9Y6F1 533 aa16.85■□□□□ 0.29
CCS-209ENST00000534763 LAMB4A4D0S4 1761 aa16.84■□□□□ 0.29
CCS-209ENST00000534763 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
CCS-209ENST00000534763 NBPF26B4DH59 902 aa16.84■□□□□ 0.29
CCS-209ENST00000534763 CCER2I3L3R5 266 aa16.84■□□□□ 0.29
CCS-209ENST00000534763 HOXB7P09629 217 aa16.84■□□□□ 0.29
CCS-209ENST00000534763 GNAI1P63096 354 aa16.84■□□□□ 0.29
CCS-209ENST00000534763 NBPF10Q6P3W6 841 aaKnown RBP16.84■□□□□ 0.29
CCS-209ENST00000534763 NBPF15Q8N660 670 aa16.84■□□□□ 0.29
CCS-209ENST00000534763 BCL2L12Q9HB09 334 aa16.84■□□□□ 0.29
CCS-209ENST00000534763 CLEC4GQ6UXB4 293 aa16.83■□□□□ 0.28
CCS-209ENST00000534763 WWC1Q8IX03 1113 aa16.83■□□□□ 0.28
CCS-209ENST00000534763 IL16Q14005 1332 aa16.82■□□□□ 0.28
CCS-209ENST00000534763 DZIP3Q86Y13 1208 aaKnown RBP16.82■□□□□ 0.28
CCS-209ENST00000534763 POLRMTO00411 1230 aaKnown RBP16.81■□□□□ 0.28
CCS-209ENST00000534763 CAMTA2O94983 1202 aa16.81■□□□□ 0.28
CCS-209ENST00000534763 TGFB2P61812 414 aa16.81■□□□□ 0.28
CCS-209ENST00000534763 MBIPQ9NS73 344 aa16.81■□□□□ 0.28
CCS-209ENST00000534763 TBC1D2BQ9UPU7 963 aa16.81■□□□□ 0.28
CCS-209ENST00000534763 LAS1LQ9Y4W2 734 aaKnown RBP16.81■□□□□ 0.28
CCS-209ENST00000534763 C10orf71Q711Q0 1435 aa16.8■□□□□ 0.28
CCS-209ENST00000534763 DDR1Q08345 913 aa16.8■□□□□ 0.28
CCS-209ENST00000534763 NFIXQ14938 502 aa16.8■□□□□ 0.28
CCS-209ENST00000534763 FAM9BQ8IZU0 186 aa16.8■□□□□ 0.28
CCS-209ENST00000534763 KLHL34Q8N239 644 aa16.8■□□□□ 0.28
CCS-209ENST00000534763 ZNF652Q9Y2D9 606 aa16.8■□□□□ 0.28
CCS-209ENST00000534763 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
CCS-209ENST00000534763 SCN7AQ01118 1682 aa16.8■□□□□ 0.28
CCS-209ENST00000534763 ERVV-1B6SEH8 477 aa16.79■□□□□ 0.28
CCS-209ENST00000534763 WDR63Q8IWG1 891 aa16.79■□□□□ 0.28
CCS-209ENST00000534763 NLGN2Q8NFZ4 835 aa16.79■□□□□ 0.28
CCS-209ENST00000534763 CHMP4AQ9BY43 222 aa16.79■□□□□ 0.28
CCS-209ENST00000534763 PIP4K2AP48426 406 aaPredicted RBP16.78■□□□□ 0.28
CCS-209ENST00000534763 PDIA6Q15084 440 aa16.78■□□□□ 0.28
CCS-209ENST00000534763 LRP10Q7Z4F1 713 aa16.77■□□□□ 0.28
CCS-209ENST00000534763 KIF13BQ9NQT8 1826 aa16.77■□□□□ 0.27
CCS-209ENST00000534763 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.27
CCS-209ENST00000534763 SERPINB2P05120 415 aa16.76■□□□□ 0.27
CCS-209ENST00000534763 EIF2S2P20042 333 aaKnown RBP16.76■□□□□ 0.27
CCS-209ENST00000534763 TBC1D9BQ66K14 1250 aa16.76■□□□□ 0.27
CCS-209ENST00000534763 DIEXFQ68CQ4 756 aaKnown RBP16.76■□□□□ 0.27
CCS-209ENST00000534763 SETDB2Q96T68 719 aa16.76■□□□□ 0.27
CCS-209ENST00000534763 DDX21Q9NR30 783 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCS-209ENST00000534763 BCORQ6W2J9 1755 aa16.76■□□□□ 0.27
CCS-209ENST00000534763 KRT24Q2M2I5 525 aa16.75■□□□□ 0.27
CCS-209ENST00000534763 DUSP27Q5VZP5 1158 aa16.75■□□□□ 0.27
CCS-209ENST00000534763 KIF6Q6ZMV9 814 aa16.75■□□□□ 0.27
CCS-209ENST00000534763 NRXN2Q9P2S2 1712 aa16.75■□□□□ 0.27
CCS-209ENST00000534763 MAP3K15Q6ZN16 1313 aa16.74■□□□□ 0.27
CCS-209ENST00000534763 MYL6BP14649 208 aa16.74■□□□□ 0.27
CCS-209ENST00000534763 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
CCS-209ENST00000534763 DBF4Q9UBU7 674 aaPredicted RBP16.74■□□□□ 0.27
CCS-209ENST00000534763 PXDNLA1KZ92 1463 aa16.73■□□□□ 0.27
CCS-209ENST00000534763 GRIN3BO60391 1043 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms